RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ZNF530Q6P9A1 599 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-204ENST00000375290 ARHGAP24Q8N264 748 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 PPFIBP2Q8ND30 876 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 MYL5Q02045 173 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 LRRC45Q96CN5 670 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 CEP63Q96MT8 703 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 PPFIA4O75335 1185 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 ATP11AP98196 1134 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 CACNA2D3Q8IZS8 1091 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 NECTIN2Q92692 538 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 PRDM10Q9NQV6 1147 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 TDRD12Q587J7 1177 aaKnown RBP11.58□□□□□ -0.56
PTCH1-204ENST00000375290 PAXIP1Q6ZW49 1069 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-204ENST00000375290 DAAM2Q86T65 1068 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 GRIN2AQ12879 1464 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 ATP2A2P16615 1042 aaKnown RBP11.58□□□□□ -0.56
PTCH1-204ENST00000375290 FOSBP53539 338 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 NAP1L4Q99733 375 aaKnown RBP11.58□□□□□ -0.56
PTCH1-204ENST00000375290 STARD3NLO95772 234 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 TBC1D5Q92609 795 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 ZNF652Q9Y2D9 606 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 FAM135BQ49AJ0 1406 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 MAST1Q9Y2H9 1570 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 AKR1B10O60218 316 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 PDE4BQ07343 736 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 CTNNBL1Q8WYA6 563 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-204ENST00000375290 IFIT1P09914 478 aaKnown RBP11.58□□□□□ -0.56
PTCH1-204ENST00000375290 ATF3P18847 181 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 FKBP4Q02790 459 aaKnown RBP eCLIP11.58□□□□□ -0.56
PTCH1-204ENST00000375290 TSNAXIP1Q2TAA8 658 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 MYO1AQ9UBC5 1043 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 GPATCH8Q9UKJ3 1502 aaKnown RBP11.57□□□□□ -0.56
PTCH1-204ENST00000375290 ACTN2P35609 894 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 MIPOL1Q8TD10 442 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 METAP2P50579 478 aaKnown RBP eCLIP11.57□□□□□ -0.56
PTCH1-204ENST00000375290 PLCB1Q9NQ66 1216 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 IGHDP01880 384 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 MTIF2P46199 727 aaKnown RBP11.57□□□□□ -0.56
PTCH1-204ENST00000375290 UQCRFS1P1P0C7P4 283 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 TAOK1Q7L7X3 1001 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 CERS3Q8IU89 383 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 CCDC26Q8TAB7 109 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 ERMNQ8TAM6 284 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 DACT1Q9NYF0 836 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 EFCAB8A8MWE9 144 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 UBA7P41226 1012 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 GPATCH11Q8N954 259 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 IRX4P78413 519 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 GOLGA5Q8TBA6 731 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 MYCBPQ99417 103 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-204ENST00000375290 ZBTB40Q9NUA8 1239 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 SARNPP82979 210 aaKnown RBP11.57□□□□□ -0.56
PTCH1-204ENST00000375290 C14orf93Q9H972 538 aaKnown RBP11.57□□□□□ -0.56
PTCH1-204ENST00000375290 SYNMO15061 1565 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 HOXB7P09629 217 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 ATP2B1P20020 1258 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 RILPL1Q5EBL4 403 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 FERMT3Q86UX7 667 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 MICALL1Q8N3F8 863 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 KIAA1524Q8TCG1 905 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 NUP133Q8WUM0 1156 aa11.57□□□□□ -0.56
PTCH1-204ENST00000375290 SPTLC2O15270 562 aa11.56□□□□□ -0.56
PTCH1-204ENST00000375290 MRFAP1L1Q96HT8 127 aa11.56□□□□□ -0.56
PTCH1-204ENST00000375290 RTL9Q8NET4 1388 aa11.56□□□□□ -0.56
PTCH1-204ENST00000375290 CCDC96Q2M329 555 aa11.56□□□□□ -0.56
PTCH1-204ENST00000375290 TMTC1Q8IUR5 882 aa11.56□□□□□ -0.56
PTCH1-204ENST00000375290 BAG1Q99933 345 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-204ENST00000375290 TM6SF1Q9BZW5 370 aa11.56□□□□□ -0.56
PTCH1-204ENST00000375290 ARHGAP31Q2M1Z3 1444 aa11.56□□□□□ -0.56
PTCH1-204ENST00000375290 ACTN4O43707 911 aaKnown RBP11.56□□□□□ -0.56
PTCH1-204ENST00000375290 CDC25BP30305 580 aa11.56□□□□□ -0.56
PTCH1-204ENST00000375290 IFT20Q8IY31 132 aa11.56□□□□□ -0.56
PTCH1-204ENST00000375290 EXOC1Q9NV70 894 aa11.56□□□□□ -0.56
PTCH1-204ENST00000375290 CNPY4Q8N129 248 aa11.56□□□□□ -0.56
PTCH1-204ENST00000375290 IQCGQ9H095 443 aaKnown RBP11.56□□□□□ -0.56
PTCH1-204ENST00000375290 TRMT1Q9NXH9 659 aaKnown RBP11.56□□□□□ -0.56
PTCH1-204ENST00000375290 FERP16591 822 aa11.56□□□□□ -0.56
PTCH1-204ENST00000375290 CAVIN4Q5BKX8 364 aa11.56□□□□□ -0.56
PTCH1-204ENST00000375290 NLRP2Q9NX02 1062 aa11.56□□□□□ -0.56
PTCH1-204ENST00000375290 CCDC6Q16204 474 aa11.56□□□□□ -0.56
PTCH1-204ENST00000375290 CCDC114Q96M63 670 aa11.56□□□□□ -0.56
PTCH1-204ENST00000375290 CCDC42Q96M95 316 aa11.56□□□□□ -0.56
PTCH1-204ENST00000375290 BCAP29Q9UHQ4 241 aa11.56□□□□□ -0.56
PTCH1-204ENST00000375290 CHMP4BP1P59074 171 aa11.56□□□□□ -0.56
PTCH1-204ENST00000375290 PPP4R3AQ6IN85 833 aa11.56□□□□□ -0.56
PTCH1-204ENST00000375290 MCM6Q14566 821 aa11.55□□□□□ -0.56
PTCH1-204ENST00000375290 MLKLQ8NB16 471 aa11.55□□□□□ -0.56
PTCH1-204ENST00000375290 DISP3Q9P2K9 1392 aa11.55□□□□□ -0.56
PTCH1-204ENST00000375290 CYP26C1Q6V0L0 522 aa11.55□□□□□ -0.56
PTCH1-204ENST00000375290 DMTNQ08495 405 aa11.55□□□□□ -0.56
PTCH1-204ENST00000375290 CABP4P57796 275 aa11.55□□□□□ -0.56
PTCH1-204ENST00000375290 RUFY3Q7L099 469 aa11.55□□□□□ -0.56
PTCH1-204ENST00000375290 INPP5BP32019 993 aa11.55□□□□□ -0.56
PTCH1-204ENST00000375290 CPLX4Q7Z7G2 160 aa11.55□□□□□ -0.56
PTCH1-204ENST00000375290 CSRNP2Q9H175 543 aa11.55□□□□□ -0.56
PTCH1-204ENST00000375290 MCMDC2Q4G0Z9 681 aa11.55□□□□□ -0.56
PTCH1-204ENST00000375290 NAA16Q6N069 864 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-204ENST00000375290 USP5P45974 858 aa11.55□□□□□ -0.56
PTCH1-204ENST00000375290 TMEM132EQ6IEE7 984 aa11.55□□□□□ -0.56
PTCH1-204ENST00000375290 RBM26Q5T8P6 1007 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms