RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 ZNF594Q96JF6 807 aaPredicted RBP15.86■□□□□ 0.13
CTDP1-202ENST00000299543 FMNL2Q96PY5 1086 aa15.86■□□□□ 0.13
CTDP1-202ENST00000299543 SNRKQ9NRH2 765 aa15.85■□□□□ 0.13
CTDP1-202ENST00000299543 NFAT5O94916 1531 aa15.84■□□□□ 0.13
CTDP1-202ENST00000299543 ADGRL3Q9HAR2 1447 aa15.84■□□□□ 0.13
CTDP1-202ENST00000299543 CYP27B1O15528 508 aa15.84■□□□□ 0.13
CTDP1-202ENST00000299543 CYP21A2P08686 494 aa15.84■□□□□ 0.13
CTDP1-202ENST00000299543 TYRO3Q06418 890 aa15.84■□□□□ 0.13
CTDP1-202ENST00000299543 FKBP4Q02790 459 aaKnown RBP eCLIP15.84■□□□□ 0.13
CTDP1-202ENST00000299543 ANO6Q4KMQ2 910 aa15.84■□□□□ 0.13
CTDP1-202ENST00000299543 ATP5JP18859 108 aa15.83■□□□□ 0.13
CTDP1-202ENST00000299543 MCMDC2Q4G0Z9 681 aa15.83■□□□□ 0.13
CTDP1-202ENST00000299543 GORABQ5T7V8 394 aa15.83■□□□□ 0.13
CTDP1-202ENST00000299543 TRIM5Q9C035 493 aa15.83■□□□□ 0.13
CTDP1-202ENST00000299543 A1BGP04217 495 aa15.83■□□□□ 0.12
CTDP1-202ENST00000299543 APOBRQ0VD83 1088 aa15.83■□□□□ 0.12
CTDP1-202ENST00000299543 TTLL7Q6ZT98 887 aa15.83■□□□□ 0.12
CTDP1-202ENST00000299543 LEO1Q8WVC0 666 aaPredicted RBP15.83■□□□□ 0.12
CTDP1-202ENST00000299543 KCNB2Q92953 911 aa15.83■□□□□ 0.12
CTDP1-202ENST00000299543 SCAND2PQ9GZW5 306 aaPredicted RBP15.83■□□□□ 0.12
CTDP1-202ENST00000299543 NCOA5Q9HCD5 579 aaKnown RBP15.83■□□□□ 0.12
CTDP1-202ENST00000299543 COPRSQ9NQ92 184 aa15.83■□□□□ 0.12
CTDP1-202ENST00000299543 ST7Q9NRC1 585 aa15.83■□□□□ 0.12
CTDP1-202ENST00000299543 NR1I2O75469 434 aa15.83■□□□□ 0.12
CTDP1-202ENST00000299543 RAB11FIP4Q86YS3 637 aa15.83■□□□□ 0.12
CTDP1-202ENST00000299543 PIBF1Q8WXW3 757 aa15.83■□□□□ 0.12
CTDP1-202ENST00000299543 FTOQ9C0B1 505 aaKnown RBP eCLIP15.83■□□□□ 0.12
CTDP1-202ENST00000299543 HMG20BQ9P0W2 317 aa15.83■□□□□ 0.12
CTDP1-202ENST00000299543 PYCARDQ9ULZ3 195 aa15.83■□□□□ 0.12
CTDP1-202ENST00000299543 FER1L4A9Z1Z3 1794 aa15.82■□□□□ 0.12
CTDP1-202ENST00000299543 A0A0G2JLW4 131 aa15.82■□□□□ 0.12
CTDP1-202ENST00000299543 UTYO14607 1347 aa15.82■□□□□ 0.12
CTDP1-202ENST00000299543 KRT32Q14532 448 aa15.82■□□□□ 0.12
CTDP1-202ENST00000299543 A0A087WWV3 80 aa15.81■□□□□ 0.12
CTDP1-202ENST00000299543 HSP90AB3PQ58FF7 597 aa15.81■□□□□ 0.12
CTDP1-202ENST00000299543 HEG1Q9ULI3 1381 aa15.81■□□□□ 0.12
CTDP1-202ENST00000299543 HAND2P61296 217 aa15.81■□□□□ 0.12
CTDP1-202ENST00000299543 DNAJC25Q9H1X3 360 aa15.81■□□□□ 0.12
CTDP1-202ENST00000299543 C19orf44Q9H6X5 657 aa15.81■□□□□ 0.12
CTDP1-202ENST00000299543 TUBGCP6Q96RT7 1819 aa15.81■□□□□ 0.12
CTDP1-202ENST00000299543 PTGS1P23219 599 aa15.81■□□□□ 0.12
CTDP1-202ENST00000299543 LRRC24Q50LG9 513 aa15.81■□□□□ 0.12
CTDP1-202ENST00000299543 DCAF5Q96JK2 942 aa15.81■□□□□ 0.12
CTDP1-202ENST00000299543 PRIMPOLQ96LW4 560 aa15.81■□□□□ 0.12
CTDP1-202ENST00000299543 FUCA2Q9BTY2 467 aa15.81■□□□□ 0.12
CTDP1-202ENST00000299543 U3KPZ7 1027 aaPredicted RBP15.81■□□□□ 0.12
CTDP1-202ENST00000299543 RFX5P48382 616 aaPredicted RBP15.8■□□□□ 0.12
CTDP1-202ENST00000299543 HMGN5P82970 282 aaKnown RBP15.8■□□□□ 0.12
CTDP1-202ENST00000299543 WASHC4Q2M389 1173 aa15.8■□□□□ 0.12
CTDP1-202ENST00000299543 FAM200AQ8TCP9 573 aa15.8■□□□□ 0.12
CTDP1-202ENST00000299543 ERCC4Q92889 916 aaPredicted RBP15.8■□□□□ 0.12
CTDP1-202ENST00000299543 GTF3C6Q969F1 213 aa15.8■□□□□ 0.12
CTDP1-202ENST00000299543 MARF1Q9Y4F3 1742 aaKnown RBP15.8■□□□□ 0.12
CTDP1-202ENST00000299543 COL15A1P39059 1388 aa15.8■□□□□ 0.12
CTDP1-202ENST00000299543 GOLGA6L6A8MZA4 724 aa15.79■□□□□ 0.12
CTDP1-202ENST00000299543 NPHP1O15259 732 aa15.79■□□□□ 0.12
CTDP1-202ENST00000299543 CAPN2P17655 700 aa15.79■□□□□ 0.12
CTDP1-202ENST00000299543 SCRN1Q12765 414 aa15.79■□□□□ 0.12
CTDP1-202ENST00000299543 MRVI1Q9Y6F6 885 aa15.79■□□□□ 0.12
CTDP1-202ENST00000299543 NCAPD2Q15021 1401 aa15.79■□□□□ 0.12
CTDP1-202ENST00000299543 MED23Q9ULK4 1368 aa15.79■□□□□ 0.12
CTDP1-202ENST00000299543 IFIT1P09914 478 aaKnown RBP15.79■□□□□ 0.12
CTDP1-202ENST00000299543 TTLL5Q6EMB2 1281 aa15.79■□□□□ 0.12
CTDP1-202ENST00000299543 TOM1L2Q6ZVM7 507 aa15.79■□□□□ 0.12
CTDP1-202ENST00000299543 TRIM34Q9BYJ4 488 aa15.79■□□□□ 0.12
CTDP1-202ENST00000299543 CBX8Q9HC52 389 aa15.79■□□□□ 0.12
CTDP1-202ENST00000299543 PAG1Q9NWQ8 432 aa15.79■□□□□ 0.12
CTDP1-202ENST00000299543 GTF2F1P35269 517 aaKnown RBP eCLIP15.79■□□□□ 0.12
CTDP1-202ENST00000299543 CCDC186Q7Z3E2 898 aa15.79■□□□□ 0.12
CTDP1-202ENST00000299543 PGBD1Q96JS3 809 aa15.79■□□□□ 0.12
CTDP1-202ENST00000299543 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.79■□□□□ 0.12
CTDP1-202ENST00000299543 V9GYY5 206 aaPredicted RBP15.79■□□□□ 0.12
CTDP1-202ENST00000299543 NPHP4O75161 1426 aaPredicted RBP15.79■□□□□ 0.12
CTDP1-202ENST00000299543 ZNF165P49910 485 aa15.78■□□□□ 0.12
CTDP1-202ENST00000299543 STOX1Q6ZVD7 989 aa15.78■□□□□ 0.12
CTDP1-202ENST00000299543 ZNF592Q92610 1267 aa15.78■□□□□ 0.12
CTDP1-202ENST00000299543 PUS3Q9BZE2 481 aaKnown RBP15.78■□□□□ 0.12
CTDP1-202ENST00000299543 NRBP1Q9UHY1 535 aa15.78■□□□□ 0.12
CTDP1-202ENST00000299543 SLFN14P0C7P3 912 aa15.78■□□□□ 0.12
CTDP1-202ENST00000299543 KBTBD3Q8NAB2 608 aa15.78■□□□□ 0.12
CTDP1-202ENST00000299543 HAUS7Q99871 368 aa15.78■□□□□ 0.12
CTDP1-202ENST00000299543 KDM6AO15550 1401 aaPredicted RBP15.78■□□□□ 0.12
CTDP1-202ENST00000299543 LRMPQ12912 555 aa15.78■□□□□ 0.12
CTDP1-202ENST00000299543 PLBD2Q8NHP8 589 aa15.78■□□□□ 0.12
CTDP1-202ENST00000299543 ZNF609O15014 1411 aa15.78■□□□□ 0.12
CTDP1-202ENST00000299543 TNNT3P45378 269 aaPredicted RBP15.77■□□□□ 0.12
CTDP1-202ENST00000299543 OTUD7BQ6GQQ9 843 aa15.77■□□□□ 0.12
CTDP1-202ENST00000299543 STRN4Q9NRL3 753 aa15.77■□□□□ 0.12
CTDP1-202ENST00000299543 CWC25Q9NXE8 425 aaPredicted RBP15.77■□□□□ 0.12
CTDP1-202ENST00000299543 NBPF26B4DH59 902 aa15.77■□□□□ 0.11
CTDP1-202ENST00000299543 NBPF14Q5TI25 921 aa15.77■□□□□ 0.11
CTDP1-202ENST00000299543 NBPF10Q6P3W6 841 aaKnown RBP15.77■□□□□ 0.11
CTDP1-202ENST00000299543 NBPF15Q8N660 670 aa15.77■□□□□ 0.11
CTDP1-202ENST00000299543 GPHNQ9NQX3 736 aaPredicted RBP15.77■□□□□ 0.11
CTDP1-202ENST00000299543 ME1P48163 572 aa15.76■□□□□ 0.11
CTDP1-202ENST00000299543 PTPDC1A2A3K4 754 aa15.76■□□□□ 0.11
CTDP1-202ENST00000299543 NCBP1Q09161 790 aaKnown RBP15.76■□□□□ 0.11
CTDP1-202ENST00000299543 KCNF1Q9H3M0 494 aa15.76■□□□□ 0.11
CTDP1-202ENST00000299543 MED1Q15648 1581 aaPredicted RBP15.76■□□□□ 0.11
CTDP1-202ENST00000299543 A0A0G2JS52 829 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms