RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 NCOA7Q8NI08 942 aa17.01■□□□□ 0.31
CNOT9-201ENST00000273064 HMGB1P09429 215 aaKnown RBP17.01■□□□□ 0.31
CNOT9-201ENST00000273064 RPS6KB1P23443 525 aa17.01■□□□□ 0.31
CNOT9-201ENST00000273064 MCM5P33992 734 aa17.01■□□□□ 0.31
CNOT9-201ENST00000273064 TYRO3Q06418 890 aa17.01■□□□□ 0.31
CNOT9-201ENST00000273064 IKQ13123 557 aaPredicted RBP17.01■□□□□ 0.31
CNOT9-201ENST00000273064 TSR1Q2NL82 804 aaKnown RBP17.01■□□□□ 0.31
CNOT9-201ENST00000273064 PLBD2Q8NHP8 589 aa17.01■□□□□ 0.31
CNOT9-201ENST00000273064 IL25Q9H293 177 aa17.01■□□□□ 0.31
CNOT9-201ENST00000273064 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.01■□□□□ 0.31
CNOT9-201ENST00000273064 V9GYY5 206 aaPredicted RBP17.01■□□□□ 0.31
CNOT9-201ENST00000273064 SNAP23O00161 211 aa17.01■□□□□ 0.31
CNOT9-201ENST00000273064 KLHL34Q8N239 644 aa17.01■□□□□ 0.31
CNOT9-201ENST00000273064 CCDC112Q8NEF3 446 aa17.01■□□□□ 0.31
CNOT9-201ENST00000273064 ANKIB1Q9P2G1 1089 aa17.01■□□□□ 0.31
CNOT9-201ENST00000273064 ASAP1Q9ULH1 1129 aa17.01■□□□□ 0.31
CNOT9-201ENST00000273064 ZAP70P43403 619 aa17■□□□□ 0.31
CNOT9-201ENST00000273064 DHX32Q7L7V1 743 aaKnown RBP17■□□□□ 0.31
CNOT9-201ENST00000273064 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17■□□□□ 0.31
CNOT9-201ENST00000273064 PRDM1O75626 825 aa17■□□□□ 0.31
CNOT9-201ENST00000273064 hCG_1642624A0A1W2PR95 340 aa17■□□□□ 0.31
CNOT9-201ENST00000273064 B4E1Z4 1266 aa17■□□□□ 0.31
CNOT9-201ENST00000273064 RNF113AO15541 343 aaKnown RBP17■□□□□ 0.31
CNOT9-201ENST00000273064 SLC5A1P13866 664 aa17■□□□□ 0.31
CNOT9-201ENST00000273064 PTGS1P23219 599 aa17■□□□□ 0.31
CNOT9-201ENST00000273064 SYNE4Q8N205 404 aa17■□□□□ 0.31
CNOT9-201ENST00000273064 XAGE2Q96GT9 111 aa17■□□□□ 0.31
CNOT9-201ENST00000273064 BRMS1Q9HCU9 246 aa17■□□□□ 0.31
CNOT9-201ENST00000273064 ZKSCAN5Q9Y2L8 839 aa17■□□□□ 0.31
CNOT9-201ENST00000273064 PLEKHG1Q9ULL1 1385 aa16.99■□□□□ 0.31
CNOT9-201ENST00000273064 SLC3A2P08195 630 aaKnown RBP16.99■□□□□ 0.31
CNOT9-201ENST00000273064 TPM1P09493 284 aa16.99■□□□□ 0.31
CNOT9-201ENST00000273064 LIG1P18858 919 aa16.99■□□□□ 0.31
CNOT9-201ENST00000273064 ITGA6P23229 1130 aa16.99■□□□□ 0.31
CNOT9-201ENST00000273064 ALG1Q9BT22 464 aa16.99■□□□□ 0.31
CNOT9-201ENST00000273064 LSG1Q9H089 658 aaKnown RBP16.99■□□□□ 0.31
CNOT9-201ENST00000273064 WWC3Q9ULE0 1092 aa16.99■□□□□ 0.31
CNOT9-201ENST00000273064 ARHGAP31Q2M1Z3 1444 aa16.99■□□□□ 0.31
CNOT9-201ENST00000273064 HOXB7P09629 217 aa16.99■□□□□ 0.31
CNOT9-201ENST00000273064 LMOD1P29536 600 aaPredicted RBP16.99■□□□□ 0.31
CNOT9-201ENST00000273064 ZNF771Q7L3S4 317 aaPredicted RBP16.99■□□□□ 0.31
CNOT9-201ENST00000273064 SPECC1Q5M775 1068 aa16.99■□□□□ 0.31
CNOT9-201ENST00000273064 DDX19AQ9NUU7 478 aaKnown RBP16.99■□□□□ 0.31
CNOT9-201ENST00000273064 PTPRMP28827 1452 aa16.98■□□□□ 0.31
CNOT9-201ENST00000273064 MAGEB6Q8N7X4 407 aa16.98■□□□□ 0.31
CNOT9-201ENST00000273064 VAT1LQ9HCJ6 419 aa16.98■□□□□ 0.31
CNOT9-201ENST00000273064 CPS1P31327 1500 aa16.98■□□□□ 0.31
CNOT9-201ENST00000273064 CYP7A1P22680 504 aa16.98■□□□□ 0.31
CNOT9-201ENST00000273064 CBX1P83916 185 aa16.98■□□□□ 0.31
CNOT9-201ENST00000273064 FTOQ9C0B1 505 aaKnown RBP eCLIP16.98■□□□□ 0.31
CNOT9-201ENST00000273064 CDK12Q9NYV4 1490 aaPredicted RBP16.98■□□□□ 0.31
CNOT9-201ENST00000273064 NLRP1Q9C000 1473 aa16.97■□□□□ 0.31
CNOT9-201ENST00000273064 USP5P45974 858 aa16.97■□□□□ 0.31
CNOT9-201ENST00000273064 PHKBQ93100 1093 aa16.97■□□□□ 0.31
CNOT9-201ENST00000273064 SLC4A4Q9Y6R1 1079 aa16.97■□□□□ 0.31
CNOT9-201ENST00000273064 CDKL5O76039 1030 aa16.97■□□□□ 0.31
CNOT9-201ENST00000273064 ADORA1P30542 326 aa16.97■□□□□ 0.31
CNOT9-201ENST00000273064 MFSD6Q6ZSS7 791 aa16.97■□□□□ 0.31
CNOT9-201ENST00000273064 CMTR1Q8N1G2 835 aaKnown RBP16.97■□□□□ 0.31
CNOT9-201ENST00000273064 AOPEPQ8N6M6 819 aa16.97■□□□□ 0.31
CNOT9-201ENST00000273064 PI4K2BQ8TCG2 481 aa16.97■□□□□ 0.31
CNOT9-201ENST00000273064 PTCH1Q13635 1447 aa16.97■□□□□ 0.31
CNOT9-201ENST00000273064 SPDYE4A6NLX3 237 aa16.97■□□□□ 0.31
CNOT9-201ENST00000273064 NOLC1Q14978 699 aaKnown RBP eCLIP16.97■□□□□ 0.31
CNOT9-201ENST00000273064 SKIDA1Q1XH10 827 aa16.97■□□□□ 0.31
CNOT9-201ENST00000273064 CAVIN4Q5BKX8 364 aa16.97■□□□□ 0.31
CNOT9-201ENST00000273064 TMC6Q7Z403 805 aa16.97■□□□□ 0.31
CNOT9-201ENST00000273064 KBTBD3Q8NAB2 608 aa16.97■□□□□ 0.31
CNOT9-201ENST00000273064 CNNM3Q8NE01 707 aa16.97■□□□□ 0.31
CNOT9-201ENST00000273064 ANO10Q9NW15 660 aa16.97■□□□□ 0.31
CNOT9-201ENST00000273064 KIDINS220Q9ULH0 1771 aa16.97■□□□□ 0.31
CNOT9-201ENST00000273064 IGKV5-2P06315 115 aa16.96■□□□□ 0.31
CNOT9-201ENST00000273064 TNNT1P13805 278 aa16.96■□□□□ 0.31
CNOT9-201ENST00000273064 OSBPL3Q9H4L5 887 aa16.96■□□□□ 0.31
CNOT9-201ENST00000273064 GPHNQ9NQX3 736 aaPredicted RBP16.96■□□□□ 0.31
CNOT9-201ENST00000273064 STAP2Q9UGK3 403 aa16.96■□□□□ 0.31
CNOT9-201ENST00000273064 ARHGEF40Q8TER5 1519 aa16.96■□□□□ 0.31
CNOT9-201ENST00000273064 CLASP1Q7Z460 1538 aa16.96■□□□□ 0.31
CNOT9-201ENST00000273064 SSBP05455 408 aaKnown RBP eCLIP16.96■□□□□ 0.31
CNOT9-201ENST00000273064 ZHX3Q9H4I2 956 aa16.96■□□□□ 0.31
CNOT9-201ENST00000273064 ZBTB43O43298 467 aa16.96■□□□□ 0.31
CNOT9-201ENST00000273064 FAM200AQ8TCP9 573 aa16.96■□□□□ 0.31
CNOT9-201ENST00000273064 TRIM34Q9BYJ4 488 aa16.96■□□□□ 0.31
CNOT9-201ENST00000273064 SLAIN2Q9P270 581 aa16.96■□□□□ 0.31
CNOT9-201ENST00000273064 ERBB3P21860 1342 aa16.96■□□□□ 0.31
CNOT9-201ENST00000273064 ZPR1O75312 459 aa16.96■□□□□ 0.3
CNOT9-201ENST00000273064 DDB1Q16531 1140 aa16.96■□□□□ 0.3
CNOT9-201ENST00000273064 ABCA9Q8IUA7 1624 aa16.95■□□□□ 0.3
CNOT9-201ENST00000273064 CYP27B1O15528 508 aa16.95■□□□□ 0.3
CNOT9-201ENST00000273064 FAM182BQ5T319 152 aa16.95■□□□□ 0.3
CNOT9-201ENST00000273064 TTC6Q86TZ1 520 aa16.95■□□□□ 0.3
CNOT9-201ENST00000273064 MTMR6Q9Y217 621 aa16.95■□□□□ 0.3
CNOT9-201ENST00000273064 TMEM94Q12767 1356 aa16.95■□□□□ 0.3
CNOT9-201ENST00000273064 NOC3LQ8WTT2 800 aaKnown RBP16.95■□□□□ 0.3
CNOT9-201ENST00000273064 MKNK2Q9HBH9 465 aa16.95■□□□□ 0.3
CNOT9-201ENST00000273064 BABAM1Q9NWV8 329 aa16.95■□□□□ 0.3
CNOT9-201ENST00000273064 GPAA1O43292 621 aa16.95■□□□□ 0.3
CNOT9-201ENST00000273064 AFMP43652 599 aa16.95■□□□□ 0.3
CNOT9-201ENST00000273064 ANKRD20A12PQ8NF67 263 aa16.95■□□□□ 0.3
CNOT9-201ENST00000273064 C8orf37Q96NL8 207 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 275.4 ms