RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 ZCRB1Q8TBF4 217 aaKnown RBP13.84□□□□□ -0.19
COL8A1-201ENST00000261037 FAM107BQ9H098 131 aa13.84□□□□□ -0.19
COL8A1-201ENST00000261037 ZRANB1Q9UGI0 708 aa13.84□□□□□ -0.19
COL8A1-201ENST00000261037 ANKRD36BQ8N2N9 1353 aa13.84□□□□□ -0.19
COL8A1-201ENST00000261037 NMIQ13287 307 aaPredicted RBP13.84□□□□□ -0.19
COL8A1-201ENST00000261037 KANK3Q6NY19 840 aa13.84□□□□□ -0.19
COL8A1-201ENST00000261037 CCDC174Q6PII3 467 aa13.84□□□□□ -0.19
COL8A1-201ENST00000261037 ZNF518AQ6AHZ1 1483 aa13.84□□□□□ -0.19
COL8A1-201ENST00000261037 CALM1P0DP23 149 aa13.84□□□□□ -0.19
COL8A1-201ENST00000261037 CALM2P0DP24 149 aa13.84□□□□□ -0.19
COL8A1-201ENST00000261037 CALM3P0DP25 149 aa13.84□□□□□ -0.19
COL8A1-201ENST00000261037 ATP2B3Q16720 1220 aa13.84□□□□□ -0.19
COL8A1-201ENST00000261037 USP48Q86UV5 1035 aa13.84□□□□□ -0.19
COL8A1-201ENST00000261037 GIMAP7Q8NHV1 300 aa13.84□□□□□ -0.19
COL8A1-201ENST00000261037 SMARCC1Q92922 1105 aaPredicted RBP13.84□□□□□ -0.19
COL8A1-201ENST00000261037 TBC1D32Q96NH3 1257 aa13.84□□□□□ -0.19
COL8A1-201ENST00000261037 JAG2Q9Y219 1238 aa13.84□□□□□ -0.19
COL8A1-201ENST00000261037 GJC1P36383 396 aa13.83□□□□□ -0.19
COL8A1-201ENST00000261037 UBASH3AP57075 661 aa13.83□□□□□ -0.19
COL8A1-201ENST00000261037 LRRC59Q96AG4 307 aaKnown RBP13.83□□□□□ -0.19
COL8A1-201ENST00000261037 TMEM110-MUSTN1A8MSY1 372 aa13.83□□□□□ -0.2
COL8A1-201ENST00000261037 NEMFO60524 1076 aa13.83□□□□□ -0.2
COL8A1-201ENST00000261037 C8orf58Q8NAV2 365 aa13.83□□□□□ -0.2
COL8A1-201ENST00000261037 SETDB2Q96T68 719 aa13.83□□□□□ -0.2
COL8A1-201ENST00000261037 SERPINA10Q9UK55 444 aa13.83□□□□□ -0.2
COL8A1-201ENST00000261037 TTC21AQ8NDW8 1320 aa13.83□□□□□ -0.2
COL8A1-201ENST00000261037 PPIP5K1Q6PFW1 1433 aa13.83□□□□□ -0.2
COL8A1-201ENST00000261037 LMBR1LQ6UX01 489 aa13.83□□□□□ -0.2
COL8A1-201ENST00000261037 A2MP01023 1474 aa13.83□□□□□ -0.2
COL8A1-201ENST00000261037 SYNCQ9H7C4 482 aa13.83□□□□□ -0.2
COL8A1-201ENST00000261037 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.83□□□□□ -0.2
COL8A1-201ENST00000261037 PTGS1P23219 599 aa13.83□□□□□ -0.2
COL8A1-201ENST00000261037 ATP2C2O75185 946 aa13.82□□□□□ -0.2
COL8A1-201ENST00000261037 ZNF354CQ86Y25 554 aa13.82□□□□□ -0.2
COL8A1-201ENST00000261037 NAPAP54920 295 aa13.82□□□□□ -0.2
COL8A1-201ENST00000261037 MIGA1Q8NAN2 632 aa13.82□□□□□ -0.2
COL8A1-201ENST00000261037 CABLES1Q8TDN4 633 aa13.82□□□□□ -0.2
COL8A1-201ENST00000261037 HOMER2Q9NSB8 354 aa13.82□□□□□ -0.2
COL8A1-201ENST00000261037 NIP7Q9Y221 180 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL8A1-201ENST00000261037 CFAP43Q8NDM7 1665 aa13.82□□□□□ -0.2
COL8A1-201ENST00000261037 MCMDC2Q4G0Z9 681 aa13.82□□□□□ -0.2
COL8A1-201ENST00000261037 SLC9C2Q5TAH2 1124 aa13.82□□□□□ -0.2
COL8A1-201ENST00000261037 NAA16Q6N069 864 aaPredicted RBP13.82□□□□□ -0.2
COL8A1-201ENST00000261037 ESYT1Q9BSJ8 1104 aa13.82□□□□□ -0.2
COL8A1-201ENST00000261037 TNNQ9UQP3 1299 aa13.82□□□□□ -0.2
COL8A1-201ENST00000261037 MRVI1Q9Y6F6 885 aa13.82□□□□□ -0.2
COL8A1-201ENST00000261037 DPH6Q7L8W6 267 aa13.82□□□□□ -0.2
COL8A1-201ENST00000261037 MRPL50Q8N5N7 158 aaKnown RBP13.82□□□□□ -0.2
COL8A1-201ENST00000261037 AOPEPQ8N6M6 819 aa13.82□□□□□ -0.2
COL8A1-201ENST00000261037 DHX58Q96C10 678 aa13.82□□□□□ -0.2
COL8A1-201ENST00000261037 ZSCAN16Q9H4T2 348 aaPredicted RBP13.82□□□□□ -0.2
COL8A1-201ENST00000261037 RMND1Q9NWS8 449 aa13.82□□□□□ -0.2
COL8A1-201ENST00000261037 PDE1AP54750 535 aa13.81□□□□□ -0.2
COL8A1-201ENST00000261037 PLS1Q14651 629 aa13.81□□□□□ -0.2
COL8A1-201ENST00000261037 TBC1D5Q92609 795 aa13.81□□□□□ -0.2
COL8A1-201ENST00000261037 PTPRKQ15262 1439 aa13.81□□□□□ -0.2
COL8A1-201ENST00000261037 MAGEB6P1A0A0J9YX57 407 aa13.81□□□□□ -0.2
COL8A1-201ENST00000261037 CEP63Q96MT8 703 aa13.81□□□□□ -0.2
COL8A1-201ENST00000261037 PYM1Q9BRP8 204 aaKnown RBP13.81□□□□□ -0.2
COL8A1-201ENST00000261037 POTEB2H3BUK9 544 aa13.81□□□□□ -0.2
COL8A1-201ENST00000261037 CCDC175P0C221 793 aa13.81□□□□□ -0.2
COL8A1-201ENST00000261037 RBM25P49756 843 aaKnown RBP13.81□□□□□ -0.2
COL8A1-201ENST00000261037 ARID5AQ03989 594 aa13.81□□□□□ -0.2
COL8A1-201ENST00000261037 HELBQ8NG08 1087 aaPredicted RBP13.81□□□□□ -0.2
COL8A1-201ENST00000261037 ESR2Q92731 530 aa13.81□□□□□ -0.2
COL8A1-201ENST00000261037 AKR1B10O60218 316 aa13.81□□□□□ -0.2
COL8A1-201ENST00000261037 ERMNQ8TAM6 284 aa13.81□□□□□ -0.2
COL8A1-201ENST00000261037 TNRQ92752 1358 aa13.81□□□□□ -0.2
COL8A1-201ENST00000261037 PBRM1Q86U86 1689 aa13.81□□□□□ -0.2
COL8A1-201ENST00000261037 AKNAD1Q5T1N1 836 aa13.81□□□□□ -0.2
COL8A1-201ENST00000261037 RBM26Q5T8P6 1007 aaKnown RBP13.81□□□□□ -0.2
COL8A1-201ENST00000261037 LRRC27Q9C0I9 530 aa13.81□□□□□ -0.2
COL8A1-201ENST00000261037 RIMBP2O15034 1052 aa13.8□□□□□ -0.2
COL8A1-201ENST00000261037 RXRAP19793 462 aa13.8□□□□□ -0.2
COL8A1-201ENST00000261037 LRSAM1Q6UWE0 723 aa13.8□□□□□ -0.2
COL8A1-201ENST00000261037 VEZTQ9HBM0 779 aa13.8□□□□□ -0.2
COL8A1-201ENST00000261037 FSD2A1L4K1 749 aa13.8□□□□□ -0.2
COL8A1-201ENST00000261037 GRM8O00222 908 aa13.8□□□□□ -0.2
COL8A1-201ENST00000261037 PHACTR2O75167 634 aa13.8□□□□□ -0.2
COL8A1-201ENST00000261037 ASIC1P78348 528 aa13.8□□□□□ -0.2
COL8A1-201ENST00000261037 DNM1Q05193 864 aaKnown RBP13.8□□□□□ -0.2
COL8A1-201ENST00000261037 DNAJC25Q9H1X3 360 aa13.8□□□□□ -0.2
COL8A1-201ENST00000261037 PAG1Q9NWQ8 432 aa13.8□□□□□ -0.2
COL8A1-201ENST00000261037 PCDHB15Q9Y5E8 787 aa13.8□□□□□ -0.2
COL8A1-201ENST00000261037 SMARCC2Q8TAQ2 1214 aa13.8□□□□□ -0.2
COL8A1-201ENST00000261037 VTI1AQ96AJ9 217 aa13.8□□□□□ -0.2
COL8A1-201ENST00000261037 C8orf37Q96NL8 207 aa13.8□□□□□ -0.2
COL8A1-201ENST00000261037 PLIN2Q99541 437 aa13.8□□□□□ -0.2
COL8A1-201ENST00000261037 MAGEB6Q8N7X4 407 aa13.8□□□□□ -0.2
COL8A1-201ENST00000261037 PAIP2Q9BPZ3 127 aaKnown RBP13.8□□□□□ -0.2
COL8A1-201ENST00000261037 UTP14AQ9BVJ6 771 aaKnown RBP13.8□□□□□ -0.2
COL8A1-201ENST00000261037 ZBTB21Q9ULJ3 1066 aa13.8□□□□□ -0.2
COL8A1-201ENST00000261037 IL16Q14005 1332 aa13.79□□□□□ -0.2
COL8A1-201ENST00000261037 FAM212AQ96EL1 285 aa13.79□□□□□ -0.2
COL8A1-201ENST00000261037 TCOF1Q13428 1488 aaKnown RBP13.79□□□□□ -0.2
COL8A1-201ENST00000261037 APOBRQ0VD83 1088 aa13.79□□□□□ -0.2
COL8A1-201ENST00000261037 MICALCLQ6ZW33 695 aa13.79□□□□□ -0.2
COL8A1-201ENST00000261037 SRRTQ9BXP5 876 aaKnown RBP13.79□□□□□ -0.2
COL8A1-201ENST00000261037 HSF2BPO75031 334 aa13.79□□□□□ -0.2
COL8A1-201ENST00000261037 CWF19L2Q2TBE0 894 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms