RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 MRVI1Q9Y6F6 885 aa19.48■□□□□ 0.71
SORT1-201ENST00000256637 BICRAQ9NZM4 1560 aa19.47■□□□□ 0.71
SORT1-201ENST00000256637 NECAB1Q8N987 351 aa19.47■□□□□ 0.71
SORT1-201ENST00000256637 AATFQ9NY61 560 aaKnown RBP eCLIP19.47■□□□□ 0.71
SORT1-201ENST00000256637 ZSCAN31Q96LW9 406 aaPredicted RBP19.47■□□□□ 0.71
SORT1-201ENST00000256637 BICC1Q9H694 974 aaKnown RBP19.47■□□□□ 0.71
SORT1-201ENST00000256637 PABPN1LA6NDY0 278 aaKnown RBP19.47■□□□□ 0.71
SORT1-201ENST00000256637 TEX11Q8IYF3 940 aa19.47■□□□□ 0.71
SORT1-201ENST00000256637 C2CD5Q86YS7 1000 aa19.47■□□□□ 0.71
SORT1-201ENST00000256637 KCNA4P22459 653 aa19.46■□□□□ 0.71
SORT1-201ENST00000256637 GDPD2Q9HCC8 539 aa19.46■□□□□ 0.71
SORT1-201ENST00000256637 NCOA1Q15788 1441 aa19.46■□□□□ 0.71
SORT1-201ENST00000256637 GRM8O00222 908 aa19.46■□□□□ 0.71
SORT1-201ENST00000256637 HOXC9P31274 260 aa19.46■□□□□ 0.71
SORT1-201ENST00000256637 ZBTB9Q96C00 473 aa19.46■□□□□ 0.71
SORT1-201ENST00000256637 ANO3Q9BYT9 981 aa19.46■□□□□ 0.71
SORT1-201ENST00000256637 PLCH2O75038 1416 aa19.45■□□□□ 0.7
SORT1-201ENST00000256637 KLF18A0A0U1RQI7 1052 aa19.45■□□□□ 0.7
SORT1-201ENST00000256637 SCNN1DP51172 638 aa19.45■□□□□ 0.7
SORT1-201ENST00000256637 RNF169Q8NCN4 708 aa19.45■□□□□ 0.7
SORT1-201ENST00000256637 GSTTP1A0A1W2PQM5 241 aa19.45■□□□□ 0.7
SORT1-201ENST00000256637 CBFA2T2O43439 604 aa19.45■□□□□ 0.7
SORT1-201ENST00000256637 RARSP54136 660 aaKnown RBP19.45■□□□□ 0.7
SORT1-201ENST00000256637 SPA17Q15506 151 aa19.45■□□□□ 0.7
SORT1-201ENST00000256637 PUS7Q96PZ0 661 aaKnown RBP19.45■□□□□ 0.7
SORT1-201ENST00000256637 CTTNBP2Q8WZ74 1663 aa19.45■□□□□ 0.7
SORT1-201ENST00000256637 TMCO5BA8MYB1 307 aa19.44■□□□□ 0.7
SORT1-201ENST00000256637 NOP56O00567 594 aaKnown RBP19.44■□□□□ 0.7
SORT1-201ENST00000256637 RNMTO43148 476 aaKnown RBP19.44■□□□□ 0.7
SORT1-201ENST00000256637 MEIS3Q99687 375 aa19.44■□□□□ 0.7
SORT1-201ENST00000256637 GJB2P29033 226 aa19.44■□□□□ 0.7
SORT1-201ENST00000256637 DCPSQ96C86 337 aaKnown RBP19.44■□□□□ 0.7
SORT1-201ENST00000256637 TSPYL1Q9H0U9 437 aa19.44■□□□□ 0.7
SORT1-201ENST00000256637 NOP2P46087 812 aaKnown RBP19.44■□□□□ 0.7
SORT1-201ENST00000256637 KIFC2Q96AC6 838 aa19.44■□□□□ 0.7
SORT1-201ENST00000256637 ITGA6P23229 1130 aa19.44■□□□□ 0.7
SORT1-201ENST00000256637 KIF22Q14807 665 aa19.44■□□□□ 0.7
SORT1-201ENST00000256637 RRP36Q96EU6 259 aaKnown RBP19.43■□□□□ 0.7
SORT1-201ENST00000256637 PTPRCP08575 1304 aa19.43■□□□□ 0.7
SORT1-201ENST00000256637 ARID5AQ03989 594 aa19.43■□□□□ 0.7
SORT1-201ENST00000256637 ITSN2Q9NZM3 1697 aa19.43■□□□□ 0.7
SORT1-201ENST00000256637 TRIM27P14373 513 aa19.43■□□□□ 0.7
SORT1-201ENST00000256637 MCM7P33993 719 aa19.43■□□□□ 0.7
SORT1-201ENST00000256637 UBE4AQ14139 1066 aa19.43■□□□□ 0.7
SORT1-201ENST00000256637 PHAXQ9H814 394 aaKnown RBP19.43■□□□□ 0.7
SORT1-201ENST00000256637 NEK1Q96PY6 1258 aa19.42■□□□□ 0.7
SORT1-201ENST00000256637 EXOC1Q9NV70 894 aa19.42■□□□□ 0.7
SORT1-201ENST00000256637 TTC21AQ8NDW8 1320 aa19.42■□□□□ 0.7
SORT1-201ENST00000256637 C8orf58Q8NAV2 365 aa19.42■□□□□ 0.7
SORT1-201ENST00000256637 RTN1Q16799 776 aa19.42■□□□□ 0.7
SORT1-201ENST00000256637 CDCA7Q9BWT1 371 aaPredicted RBP19.42■□□□□ 0.7
SORT1-201ENST00000256637 ORC3Q9UBD5 711 aaPredicted RBP19.42■□□□□ 0.7
SORT1-201ENST00000256637 CETN2P41208 172 aa19.42■□□□□ 0.7
SORT1-201ENST00000256637 UBA7P41226 1012 aa19.42■□□□□ 0.7
SORT1-201ENST00000256637 ECHDC1Q9NTX5 307 aa19.42■□□□□ 0.7
SORT1-201ENST00000256637 ZNF518AQ6AHZ1 1483 aa19.42■□□□□ 0.7
SORT1-201ENST00000256637 PRXQ9BXM0 1461 aa19.41■□□□□ 0.7
SORT1-201ENST00000256637 H0YHG0 523 aa19.41■□□□□ 0.7
SORT1-201ENST00000256637 CBX1P83916 185 aa19.41■□□□□ 0.7
SORT1-201ENST00000256637 ANKRD2Q9GZV1 360 aa19.41■□□□□ 0.7
SORT1-201ENST00000256637 PAG1Q9NWQ8 432 aa19.41■□□□□ 0.7
SORT1-201ENST00000256637 IRX3P78415 501 aaPredicted RBP19.41■□□□□ 0.7
SORT1-201ENST00000256637 TRIM6Q9C030 488 aaPredicted RBP19.41■□□□□ 0.7
SORT1-201ENST00000256637 TRAPPC8Q9Y2L5 1435 aa19.41■□□□□ 0.7
SORT1-201ENST00000256637 STX6O43752 255 aa19.41■□□□□ 0.7
SORT1-201ENST00000256637 STAT6P42226 847 aa19.4■□□□□ 0.7
SORT1-201ENST00000256637 SCAF11Q99590 1463 aaKnown RBP19.4■□□□□ 0.7
SORT1-201ENST00000256637 SERPINA10Q9UK55 444 aa19.4■□□□□ 0.7
SORT1-201ENST00000256637 SSX2IPQ9Y2D8 614 aa19.4■□□□□ 0.7
SORT1-201ENST00000256637 FSIP1Q8NA03 581 aa19.4■□□□□ 0.7
SORT1-201ENST00000256637 SYCE3A1L190 88 aa19.4■□□□□ 0.7
SORT1-201ENST00000256637 KLHDC4Q8TBB5 520 aa19.4■□□□□ 0.7
SORT1-201ENST00000256637 ARMT1Q9H993 441 aa19.4■□□□□ 0.7
SORT1-201ENST00000256637 ESR2Q92731 530 aa19.4■□□□□ 0.7
SORT1-201ENST00000256637 EYA1Q99502 592 aa19.4■□□□□ 0.7
SORT1-201ENST00000256637 HIBADHP31937 336 aaKnown RBP19.39■□□□□ 0.7
SORT1-201ENST00000256637 PSDA5PKW4 1024 aaPredicted RBP19.39■□□□□ 0.7
SORT1-201ENST00000256637 LPXNO60711 386 aa19.39■□□□□ 0.7
SORT1-201ENST00000256637 GTF2IP78347 998 aa19.39■□□□□ 0.69
SORT1-201ENST00000256637 HSP90AA2PQ14568 343 aaPredicted RBP19.39■□□□□ 0.69
SORT1-201ENST00000256637 SMTNL1A8MU46 457 aa19.39■□□□□ 0.69
SORT1-201ENST00000256637 AAMPQ13685 434 aa19.39■□□□□ 0.69
SORT1-201ENST00000256637 KRT23Q9C075 422 aa19.39■□□□□ 0.69
SORT1-201ENST00000256637 HMGB1P09429 215 aaKnown RBP19.38■□□□□ 0.69
SORT1-201ENST00000256637 LGR6Q9HBX8 967 aa19.38■□□□□ 0.69
SORT1-201ENST00000256637 C6orf50Q9HD87 102 aa19.38■□□□□ 0.69
SORT1-201ENST00000256637 CSADQ9Y600 493 aa19.38■□□□□ 0.69
SORT1-201ENST00000256637 ZBTB43O43298 467 aa19.38■□□□□ 0.69
SORT1-201ENST00000256637 MARCKSP29966 332 aaPredicted RBP19.38■□□□□ 0.69
SORT1-201ENST00000256637 NDUFB9Q9Y6M9 179 aa19.38■□□□□ 0.69
SORT1-201ENST00000256637 ATP10BO94823 1461 aa19.38■□□□□ 0.69
SORT1-201ENST00000256637 Q6ZUG5 572 aa19.38■□□□□ 0.69
SORT1-201ENST00000256637 ERCC4Q92889 916 aaPredicted RBP19.38■□□□□ 0.69
SORT1-201ENST00000256637 FAM13AO94988 1023 aa19.38■□□□□ 0.69
SORT1-201ENST00000256637 CETN1Q12798 172 aa19.38■□□□□ 0.69
SORT1-201ENST00000256637 MCM5P33992 734 aa19.37■□□□□ 0.69
SORT1-201ENST00000256637 RBM25P49756 843 aaKnown RBP19.37■□□□□ 0.69
SORT1-201ENST00000256637 ALDH1L2Q3SY69 923 aa19.37■□□□□ 0.69
SORT1-201ENST00000256637 DCAF5Q96JK2 942 aa19.37■□□□□ 0.69
SORT1-201ENST00000256637 ALG1Q9BT22 464 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms