RNA–Protein interactions for RNA: ENSMUST00000221654.1

Rnf220-212, Transcript of E3 ubiquitin-protein ligase Rnf220, mousemouse

TSL 1 (best) BASIC

Gene Rnf220, Length 1,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220-212ENSMUST00000221654 Rbm17Q8JZX4 405 aaKnown RBP29.73■■■□□ 2.35
Rnf220-212ENSMUST00000221654 Emilin2Q8K482 1074 aa29.73■■■□□ 2.35
Rnf220-212ENSMUST00000221654 Tceanc2Q8R2M0 207 aa29.73■■■□□ 2.35
Rnf220-212ENSMUST00000221654 Pde8bE9Q4S1 865 aa29.72■■■□□ 2.35
Rnf220-212ENSMUST00000221654 Hspd1P63038 573 aaKnown RBP29.72■■■□□ 2.35
Rnf220-212ENSMUST00000221654 Irgm2A0A140LIF8 407 aa29.71■■■□□ 2.35
Rnf220-212ENSMUST00000221654 Plekhf1Q3TB82 279 aa29.71■■■□□ 2.35
Rnf220-212ENSMUST00000221654 Ifit1bl2Q3U687 466 aa29.71■■■□□ 2.35
Rnf220-212ENSMUST00000221654 Lmbrd2Q8C561 694 aa29.71■■■□□ 2.35
Rnf220-212ENSMUST00000221654 Ttc14Q9CSP9 761 aa29.71■■■□□ 2.35
Rnf220-212ENSMUST00000221654 Bcl11aQ9QYE3 773 aa29.71■■■□□ 2.35
Rnf220-212ENSMUST00000221654 Prl7a2O54831 253 aa29.71■■■□□ 2.35
Rnf220-212ENSMUST00000221654 Riok1Q922Q2 567 aa29.71■■■□□ 2.35
Rnf220-212ENSMUST00000221654 Sept1P42209 366 aa29.7■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Bms1Q6PGF5 1284 aaKnown RBP29.7■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Glipr1l2Q9CQ35 332 aa29.7■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Il17raQ60943 864 aa29.69■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Map10Q8BJS7 891 aa29.69■■■□□ 2.34
Rnf220-212ENSMUST00000221654 AidaQ8C4Q6 305 aa29.69■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Plekho1Q9JIY0 408 aa29.69■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Trip6Q9Z1Y4 480 aa29.69■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Gadd45bP22339 160 aa29.69■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Snrpa1P57784 255 aaKnown RBP29.69■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Snai1Q02085 264 aa29.69■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Rtkn2Q14B46 604 aa29.69■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Ccar2Q8VDP4 922 aaKnown RBP29.69■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Ube3bQ9ES34 1070 aa29.69■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Dctn1O08788 1281 aa29.68■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Aox1O54754 1333 aa29.67■■■□□ 2.34
Rnf220-212ENSMUST00000221654 InhbeO08717 350 aa29.67■■■□□ 2.34
Rnf220-212ENSMUST00000221654 FanccP50652 591 aa29.67■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Nlrp9aQ66X03 949 aa29.67■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Nhsl1Q8CAF4 1587 aa29.67■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Bicdl1A0JNT9 577 aa29.67■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Cfap44E9Q5M6 1843 aa29.67■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Prl3d1P18121 224 aa29.66■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Wdr93Q402B2 695 aa29.66■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Sptlc3Q8BG54 563 aa29.66■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Appbp2Q9DAX9 585 aa29.66■■■□□ 2.34
Rnf220-212ENSMUST00000221654 IncenpQ9WU62 880 aa29.66■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Setdb1O88974 1307 aa29.66■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Myh7Q91Z83 1935 aa29.66■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Trim56Q80VI1 734 aaKnown RBP29.65■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Ppp1r10Q80W00 888 aaKnown RBP29.65■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Ccdc158Q8CDI6 1109 aa29.65■■■□□ 2.34
Rnf220-212ENSMUST00000221654 NgdnQ9DB96 315 aaKnown RBP29.65■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Dpf1Q9QX66 387 aa29.65■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Hap1O35668 628 aa29.65■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Il4rP16382 810 aa29.65■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Plch1Q4KWH5 1682 aa29.65■■■□□ 2.34
Rnf220-212ENSMUST00000221654 GakQ99KY4 1305 aa29.64■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Ltbp1Q8CG19 1712 aa29.64■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Gm9992B2RWK3 458 aa29.64■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Smarcc1P97496 1104 aa29.64■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Unc93aQ710D3 458 aa29.64■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Rassf8Q8CJ96 419 aa29.64■■■□□ 2.34
Rnf220-212ENSMUST00000221654 Usp42B2RQC2 1324 aaKnown RBP29.64■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Cyp2c23E9Q5K4 494 aa29.63■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Irx3P81067 507 aa29.63■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Sh3bp5Q9Z131 463 aa29.63■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Stat1P42225 749 aa29.63■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Abtb2Q7TQI7 1024 aa29.63■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Carmil3Q3UFQ8 1375 aa29.62■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Nol12Q8BG17 217 aa29.62■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Bloc1s2Q9CWG9 143 aa29.62■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Mapk8ip1Q9WVI9 707 aa29.62■■■□□ 2.33
Rnf220-212ENSMUST00000221654 C4bP01029 1738 aa29.62■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Exosc10P56960 887 aaKnown RBP29.61■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Zc3h12cQ5DTV4 884 aa29.61■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Tsr2Q8C8T8 191 aa29.61■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Atad2Q8CDM1 1040 aa29.61■■■□□ 2.33
Rnf220-212ENSMUST00000221654 NaspQ99MD9 773 aaKnown RBP29.61■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Gm4340L7N2C4 268 aa29.61■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Npy5rO70342 466 aa29.61■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Ctdnep1Q3TP92 244 aa29.61■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Gm21985Q6P6P5 1106 aa29.61■■■□□ 2.33
Rnf220-212ENSMUST00000221654 DpydQ8CHR6 1025 aa29.61■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Pde3aQ9Z0X4 1141 aa29.61■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Usp48Q3V0C5 1052 aa29.6■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Edrf1Q6GQV7 1239 aa29.6■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Ppp6r1Q7TSI3 856 aa29.6■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Cep57l1Q8VDS7 400 aa29.6■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Sik3Q6P4S6 1311 aa29.6■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Speer4dL7N216 212 aa29.59■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Zfp113Q8C689 439 aa29.59■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Col3a1P08121 1464 aa29.59■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Lrrc43Q3V0L5 667 aa29.59■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Nme8Q715T0 586 aa29.59■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Tmem67Q8BR76 992 aa29.59■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Dnttip2Q8R2M2 758 aaKnown RBP29.59■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Sgsm1Q8BPQ7 1093 aa29.58■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Kiaa0319lQ8K135 1048 aa29.58■■■□□ 2.33
Rnf220-212ENSMUST00000221654 4931400O07RikQ9D4M5 137 aa29.58■■■□□ 2.33
Rnf220-212ENSMUST00000221654 Kiaa0753Q6A000 959 aa29.57■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Gm13023A2A8N2 498 aa29.57■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Vsig10D3YX43 558 aa29.57■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Adam1bQ8R534 806 aa29.57■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Emilin1Q99K41 1017 aa29.57■■■□□ 2.32
Rnf220-212ENSMUST00000221654 4930523C07RikE9Q2T4 99 aa29.55■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Leo1Q5XJE5 667 aa29.55■■■□□ 2.32
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms