RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Trim34aQ99PP6 485 aa15.83■□□□□ 0.13
Pdlim5-208ENSMUST00000196220 Ube3bQ9ES34 1070 aa15.83■□□□□ 0.13
Pdlim5-208ENSMUST00000196220 Rps6ka4Q9Z2B9 773 aa15.83■□□□□ 0.13
Pdlim5-208ENSMUST00000196220 Gadd45bP22339 160 aa15.82■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Cyp2d10P24456 504 aa15.82■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 ErmnQ5EBJ4 281 aa15.82■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Esco1Q69Z69 843 aa15.82■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Zfp113Q8C689 439 aa15.82■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Atad2Q8CDM1 1040 aa15.82■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Med4Q9CQA5 270 aa15.82■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Myh1Q5SX40 1942 aa15.82■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Itga6Q61739 1091 aa15.82■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Klc3Q91W40 508 aa15.82■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 BrapQ99MP8 591 aa15.82■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Appbp2Q9DAX9 585 aa15.82■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Plekho1Q9JIY0 408 aa15.82■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Igbp1bQ9QZ29 343 aa15.82■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Lama4P97927 1816 aa15.81■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Ankrd31A0A140LI88 1765 aa15.81■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Pde8bE9Q4S1 865 aa15.81■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 TrdnE9Q9K5 693 aa15.81■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Prl3d1P18121 224 aa15.81■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Leo1Q5XJE5 667 aa15.81■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Adam1aQ60813 791 aa15.81■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Cyp7a1Q64505 503 aa15.81■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Gm21985Q6P6P5 1106 aa15.81■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Ncaph2Q8BSP2 607 aa15.81■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Ccdc158Q8CDI6 1109 aa15.81■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Usp42B2RQC2 1324 aaKnown RBP15.8■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Setdb1O88974 1307 aa15.8■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 AU015836B2RUM3 263 aa15.8■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 F2rP30558 430 aa15.8■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Sept1P42209 366 aa15.8■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Exosc10P56960 887 aaKnown RBP15.8■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Snrpa1P57784 255 aaKnown RBP15.8■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 BcanQ61361 883 aa15.8■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Nme8Q715T0 586 aa15.8■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 SowahdQ8BY98 327 aa15.8■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Ccdc178Q8CDV0 866 aa15.8■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Cacna1sQ02789 1880 aa15.8■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Prl7a2O54831 253 aa15.8■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Igflr1Q3U4N7 345 aa15.8■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Slf2Q6P9P0 1278 aa15.8■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 ImmtQ8CAQ8 757 aaKnown RBP15.8■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Sh3bp5Q9Z131 463 aa15.8■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 4931408C20RikE9PWP9 1381 aa15.79■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 PtmaP26350 111 aa15.79■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Rtkn2Q14B46 604 aa15.79■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Plekhf1Q3TB82 279 aa15.79■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Nlrp9aQ66X03 949 aa15.79■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Tbc1d30Q69ZT9 766 aa15.79■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Rassf8Q8CJ96 419 aa15.79■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Rbm17Q8JZX4 405 aaKnown RBP15.79■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Sik3Q6P4S6 1311 aa15.78■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Usp48Q3V0C5 1052 aa15.78■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Smarcc2Q6PDG5 1213 aa15.78■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Nap1l3Q794H2 544 aa15.78■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Map10Q8BJS7 891 aa15.78■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Kdm4aQ8BW72 1064 aa15.78■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Bcl11bQ99PV8 884 aa15.78■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Pus3Q9JI38 481 aa15.78■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Wdr19Q3UGF1 1341 aa15.78■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Myh7Q91Z83 1935 aa15.77■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Bin2D3Z6Q9 489 aa15.77■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Speer4dL7N216 212 aa15.77■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Limch1Q3UH68 1057 aa15.77■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Kiaa0753Q6A000 959 aa15.77■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 R3hcc1Q8BSI6 488 aa15.77■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Alx1Q8C8B0 326 aa15.77■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 ZwintQ9CQU5 252 aa15.77■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Dpf1Q9QX66 387 aa15.77■□□□□ 0.12
Pdlim5-208ENSMUST00000196220 Col3a1P08121 1464 aa15.77■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Syce3B5KM66 88 aa15.77■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Fam184aE9PW83 1143 aa15.77■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Gm4340L7N2C4 268 aa15.77■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 SlkO54988 1233 aa15.77■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Ltv1Q6NSQ7 470 aaKnown RBP15.77■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Tceanc2Q8R2M0 207 aa15.77■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Iffo2Q8R2V2 512 aa15.77■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Ccne2Q9Z238 404 aa15.77■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Dhx16G3X8X0 1044 aaKnown RBP15.76■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Susd4Q8BH32 490 aa15.76■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Tmem67Q8BR76 992 aa15.76■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Lmbrd2Q8C561 694 aa15.76■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Slc5a4bQ91ZP4 660 aa15.76■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Trim44Q9QXA7 346 aa15.76■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Cfap44E9Q5M6 1843 aa15.75■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Ctdnep1Q3TP92 244 aa15.75■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Cep63Q3UPP8 700 aa15.75■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Casc1Q6TDU8 730 aa15.75■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Me3Q8BMF3 604 aa15.75■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Nup88Q8CEC0 753 aaKnown RBP15.75■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 DpydQ8CHR6 1025 aa15.75■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Emilin2Q8K482 1074 aa15.75■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 PdcQ9QW08 244 aa15.75■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Npy5rO70342 466 aa15.74■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Znf326O88291 580 aa15.74■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Anxa1P10107 346 aaKnown RBP15.74■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Pald1P70261 859 aa15.74■□□□□ 0.11
Pdlim5-208ENSMUST00000196220 Ifit1bl2Q3U687 466 aa15.74■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 45.3 ms