RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Atp2b3Q0VF55 1220 aa37.46■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 Smarca5Q91ZW3 1051 aaKnown RBP37.46■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 Znfx1Q8R151 1909 aaKnown RBP37.45■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 Atg4a-psA0A0G2JFS9 396 aa37.45■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 Thrap3Q569Z6 951 aaKnown RBP37.45■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 Atg4aQ8C9S8 396 aa37.45■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 Ltn1Q6A009 1767 aa37.45■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Cyp2c68K7N6C2 491 aa37.44■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Timm10P62073 90 aa37.44■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Nphp3Q7TNH6 1325 aa37.44■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Ell2Q3UKU1 639 aa37.43■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Znf692Q3U381 531 aa37.43■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Sh3bp5lQ99LH9 392 aa37.43■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Scn11aQ9R053 1765 aa37.42■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Gm4340L7N2C4 268 aa37.42■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 PnnO35691 725 aaKnown RBP37.42■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Gpr162Q3UN16 588 aa37.42■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Gpr101Q80T62 511 aa37.42■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Aldh8a1Q8BH00 487 aa37.42■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 4930504O13RikQ8C5Z9 145 aa37.42■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 ParvgQ9ERD8 331 aa37.42■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Casp1P29452 402 aa37.41■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 LifrP42703 1092 aa37.41■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Kiaa0753Q6A000 959 aa37.41■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Atl3Q91YH5 541 aa37.41■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Mctp2Q5RJH2 878 aa37.4■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Sept1P42209 366 aa37.39■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Ift57Q8BXG3 429 aa37.39■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 WdpcpQ8C456 722 aa37.39■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Map3k9Q3U1V8 1077 aa37.39■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Rnf180Q3U827 592 aa37.39■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Mrpl12Q9DB15 201 aaKnown RBP37.39■■■■□ 3.58
Ctdnep1-201ENSMUST00000108593 Carmil3Q3UFQ8 1375 aa37.38■■■■□ 3.57
Ctdnep1-201ENSMUST00000108593 Kcnq5Q9JK45 933 aa37.38■■■■□ 3.57
Ctdnep1-201ENSMUST00000108593 Nup98Q6PFD9 1816 aaKnown RBP37.37■■■■□ 3.57
Ctdnep1-201ENSMUST00000108593 Rhbdl3P58873 404 aa37.37■■■■□ 3.57
Ctdnep1-201ENSMUST00000108593 TsksO54887 585 aa37.36■■■■□ 3.57
Ctdnep1-201ENSMUST00000108593 Sf3a1Q8K4Z5 791 aaKnown RBP37.36■■■■□ 3.57
Ctdnep1-201ENSMUST00000108593 Slc26a8Q8R0C3 999 aa37.36■■■■□ 3.57
Ctdnep1-201ENSMUST00000108593 Bag3Q9JLV1 577 aaKnown RBP37.36■■■■□ 3.57
Ctdnep1-201ENSMUST00000108593 Nrxn2E9Q7X7 1710 aa37.36■■■■□ 3.57
Ctdnep1-201ENSMUST00000108593 DbnlQ62418 436 aa37.35■■■■□ 3.57
Ctdnep1-201ENSMUST00000108593 Asap2Q7SIG6 958 aa37.35■■■■□ 3.57
Ctdnep1-201ENSMUST00000108593 Ufl1Q8CCJ3 793 aaKnown RBP37.34■■■■□ 3.57
Ctdnep1-201ENSMUST00000108593 Plekhg6Q8R0J1 787 aa37.34■■■■□ 3.57
Ctdnep1-201ENSMUST00000108593 Gcc1Q9D4H2 778 aa37.34■■■■□ 3.57
Ctdnep1-201ENSMUST00000108593 Cgnl1Q6AW69 1298 aa37.33■■■■□ 3.57
Ctdnep1-201ENSMUST00000108593 Ccdc27Q3V036 639 aa37.32■■■■□ 3.57
Ctdnep1-201ENSMUST00000108593 Ccne2Q9Z238 404 aa37.32■■■■□ 3.57
Ctdnep1-201ENSMUST00000108593 Golgb1E9PVZ8 3238 aa37.32■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Ccdc51Q3URS9 406 aa37.32■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Sptlc3Q8BG54 563 aa37.32■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Gjd4Q8BSD4 364 aa37.32■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Skor1Q8BX46 964 aa37.32■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Tmem266Q8BZB3 538 aa37.32■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Smc5Q8CG46 1101 aaKnown RBP37.32■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Sytl4Q9R0Q1 673 aa37.32■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Vil1Q62468 827 aa37.31■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Tbc1d8Q9Z1A9 1134 aa37.31■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Hoxa7P02830 229 aa37.3■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Pik3ap1Q9EQ32 811 aa37.3■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Ddx46Q569Z5 1032 aaKnown RBP37.29■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Slc51aQ8R000 340 aa37.29■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Slc4a1P04919 929 aa37.28■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Irs4Q9Z0Y7 1216 aa37.28■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Csrnp1P59054 583 aa37.28■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Cetn4Q8K4K1 168 aa37.28■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Tbc1d4Q8BYJ6 1307 aa37.27■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Cyp46a1Q9WVK8 500 aa37.27■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Megf6Q80V70 1572 aa37.27■■■■□ 3.56
Ctdnep1-201ENSMUST00000108593 Fchsd1Q6PFY1 688 aa37.25■■■■□ 3.55
Ctdnep1-201ENSMUST00000108593 Setdb1O88974 1307 aa37.25■■■■□ 3.55
Ctdnep1-201ENSMUST00000108593 Eif2s2Q99L45 331 aaKnown RBP37.25■■■■□ 3.55
Ctdnep1-201ENSMUST00000108593 Ankrd63A2ARS0 390 aa37.24■■■■□ 3.55
Ctdnep1-201ENSMUST00000108593 Mcm2P97310 904 aa37.24■■■■□ 3.55
Ctdnep1-201ENSMUST00000108593 Ccdc146E9Q9F7 977 aa37.23■■■■□ 3.55
Ctdnep1-201ENSMUST00000108593 CfhP06909 1234 aa37.23■■■■□ 3.55
Ctdnep1-201ENSMUST00000108593 NogP97466 232 aa37.23■■■■□ 3.55
Ctdnep1-201ENSMUST00000108593 Eddm13E9Q7F5 164 aa37.22■■■■□ 3.55
Ctdnep1-201ENSMUST00000108593 Abtb2Q7TQI7 1024 aa37.22■■■■□ 3.55
Ctdnep1-201ENSMUST00000108593 Brd1E9PZ26 1189 aaKnown RBP37.21■■■■□ 3.55
Ctdnep1-201ENSMUST00000108593 Gm5592Q3V0A6 857 aa37.21■■■■□ 3.55
Ctdnep1-201ENSMUST00000108593 Nlrp9aQ66X03 949 aa37.21■■■■□ 3.55
Ctdnep1-201ENSMUST00000108593 Riok1Q922Q2 567 aa37.21■■■■□ 3.55
Ctdnep1-201ENSMUST00000108593 Pdzrn3Q69ZS0 1063 aa37.21■■■■□ 3.55
Ctdnep1-201ENSMUST00000108593 HdlbpQ8VDJ3 1268 aaKnown RBP37.21■■■■□ 3.55
Ctdnep1-201ENSMUST00000108593 Izumo3A6PWV3 263 aa37.2■■■■□ 3.55
Ctdnep1-201ENSMUST00000108593 Fam228bQ497Q6 232 aa37.2■■■■□ 3.55
Ctdnep1-201ENSMUST00000108593 Zc3h15Q3TIV5 426 aaKnown RBP37.18■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Zcwpw1Q6IR42 630 aa37.18■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Spon1Q8VCC9 807 aa37.18■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Krt25Q8VCW2 446 aa37.18■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 A0A1W2P7S8 802 aa37.18■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Usp17lbE9Q9U0 468 aa37.18■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Spg7Q3ULF4 781 aa37.18■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 CbarpQ66L44 698 aa37.18■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Cdc5lQ6A068 802 aaKnown RBP37.18■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Mast3Q3U214 1321 aa37.17■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Psmd1Q3TXS7 953 aa37.17■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Nell2Q61220 819 aa37.17■■■■□ 3.54
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms