RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Tex14Q7M6U3 1450 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Zscan29E9Q5B4 869 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 NmiO35309 314 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Cdr2P97817 455 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Gna11P21278 359 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Ppfibp1Q8C8U0 969 aaKnown RBP11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 DonsonQ9QXP4 560 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Mx2Q9WVP9 655 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Znf394Q9Z1D9 521 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Specc1Q5SXY1 1067 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Triml1Q8BVP1 470 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Map3k9Q3U1V8 1077 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Ccne1Q61457 408 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Soga3Q6NZL0 945 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Cdc42bpaQ3UU96 1719 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 SsbP32067 415 aaKnown RBP11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Rab3il1Q8VDV3 383 aa11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Amotl1Q9D4H4 968 aa11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Fam50bQ9WTJ8 334 aa11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Adamts12Q811B3 1600 aa11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Luc7l2Q7TNC4 392 aaKnown RBP11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Skap1Q3UUV5 355 aa11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Fam114a1Q9D281 569 aa11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Ankrd50F7BE84 1390 aa11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Gpr161B2RPY5 545 aa11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Ddx23D3Z0M9 819 aaKnown RBP11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Kdm4aQ8BW72 1064 aa11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Ddx54Q8K4L0 874 aaKnown RBP11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Slc12a5Q91V14 1138 aa11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Tmod2Q9JKK7 351 aa11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 GlmnQ8BZM1 596 aa11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Egfl6Q9JJZ5 550 aa11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Syt1P46096 421 aa11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Mkrn1Q9QXP6 481 aa11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Klhl30Q8C3F7 581 aa11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 BbxQ8VBW5 907 aa11.86□□□□□ -0.51
Scn8a-201ENSMUST00000082209 1700006A11RikB9EHI3 544 aa11.85□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Rbbp8nlA2ABX0 614 aa11.85□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Rsph10bE9PYQ0 876 aa11.85□□□□□ -0.51
Scn8a-201ENSMUST00000082209 4921530L21RikQ9CQ47 274 aa11.85□□□□□ -0.51
Scn8a-201ENSMUST00000082209 PrkcshO08795 521 aa11.85□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Bicd1Q8BR07 835 aa11.85□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Tax1bp1Q3UKC1 814 aaKnown RBP11.85□□□□□ -0.51
Scn8a-201ENSMUST00000082209 ParvgQ9ERD8 331 aa11.85□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Lrrc7Q80TE7 1490 aa11.85□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Atp8b2P98199 1209 aa11.85□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Znf131Q8K3J5 619 aa11.85□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Sos2Q02384 1333 aa11.85□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Tex2Q6ZPJ0 1128 aaKnown RBP11.85□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Trim27Q62158 513 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Themis2Q91YX0 663 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Ccdc129Q14B48 1034 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 EappQ5BU09 281 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Apol7cQ8C6E1 369 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Tbc1d8Q9Z1A9 1134 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Cdk13Q69ZA1 1511 aaKnown RBP11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Sdad1Q80UZ2 687 aaKnown RBP11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Palm3A2TJV2 734 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Dnm1P39053 867 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Cyp7a1Q64505 503 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Ctnnbl1Q9CWL8 563 aaKnown RBP11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Dydc2Q9D3X8 139 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Efcab6Q6P1E8 1516 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Gimap8Q75N62 688 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Haus1Q8BHX1 278 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Rufy3Q9D394 469 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Gbp2Q9Z0E6 589 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Trpm2Q91YD4 1506 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Dennd4bQ3U1Y4 1499 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Tyro3P55144 880 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Sptlc2P97363 560 aaKnown RBP11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Ncaph2Q8BSP2 607 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 St5Q924W7 1134 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Lman1Q9D0F3 517 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Ccdc152E9PX14 254 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Cct2P80314 535 aaKnown RBP11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 U2af1l4Q8BGJ9 220 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Smarca5Q91ZW3 1051 aaKnown RBP11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Dpf1Q9QX66 387 aa11.84□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Traf1P39428 409 aa11.83□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Rpl13P47963 211 aaKnown RBP11.83□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Zkscan4Q5SZT6 480 aa11.83□□□□□ -0.52
Scn8a-201ENSMUST00000082209 SltmQ8CH25 1031 aaKnown RBP11.83□□□□□ -0.52
Scn8a-201ENSMUST00000082209 3425401B19RikD3Z1D3 1412 aa11.83□□□□□ -0.52
Scn8a-201ENSMUST00000082209 RalylQ8BTF8 293 aa11.83□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Nphp4P59240 1425 aa11.83□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Rnf17Q99MV7 1640 aa11.83□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Ccdc157Q5SPX1 718 aa11.83□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Prpf40aQ9R1C7 953 aaKnown RBP11.83□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Gm10563F6WIE4 79 aa11.83□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Ubap1lG3UW59 384 aa11.83□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Kif5bQ61768 963 aa11.83□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Pla2r1Q62028 1487 aa11.83□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Mrpl12Q9DB15 201 aaKnown RBP11.83□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Mical3Q8CJ19 1993 aa11.83□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Serpinc1P32261 465 aa11.83□□□□□ -0.52
Scn8a-201ENSMUST00000082209 DlatQ8BMF4 642 aa11.83□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Gm28510A0A087WP28 240 aa11.83□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Slf2Q6P9P0 1278 aa11.83□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Nucb1Q02819 459 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms