RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Nlrp1aQ2LKU9 1182 aa22.8■■□□□ 1.24
Vti1b-201ENSMUST00000055262 Dhx38Q80X98 1228 aa22.8■■□□□ 1.24
Vti1b-201ENSMUST00000055262 Plekhg6Q8R0J1 787 aa22.8■■□□□ 1.24
Vti1b-201ENSMUST00000055262 Fbxo3Q9DC63 480 aa22.8■■□□□ 1.24
Vti1b-201ENSMUST00000055262 Plbd2Q3TCN2 594 aa22.79■■□□□ 1.24
Vti1b-201ENSMUST00000055262 Tmc2Q8R4P4 888 aa22.79■■□□□ 1.24
Vti1b-201ENSMUST00000055262 LratQ9JI60 231 aa22.79■■□□□ 1.24
Vti1b-201ENSMUST00000055262 Yy1Q00899 414 aa22.79■■□□□ 1.24
Vti1b-201ENSMUST00000055262 Armcx1Q9CX83 456 aa22.79■■□□□ 1.24
Vti1b-201ENSMUST00000055262 CarsQ9ER72 831 aaKnown RBP22.79■■□□□ 1.24
Vti1b-201ENSMUST00000055262 Carmil3Q3UFQ8 1375 aa22.78■■□□□ 1.24
Vti1b-201ENSMUST00000055262 Eddm13E9Q7F5 164 aa22.78■■□□□ 1.24
Vti1b-201ENSMUST00000055262 SkilQ60665 675 aa22.78■■□□□ 1.24
Vti1b-201ENSMUST00000055262 Atl3Q91YH5 541 aa22.78■■□□□ 1.24
Vti1b-201ENSMUST00000055262 Znfx1Q8R151 1909 aaKnown RBP22.77■■□□□ 1.24
Vti1b-201ENSMUST00000055262 Rab3gap1Q80UJ7 981 aa22.77■■□□□ 1.24
Vti1b-201ENSMUST00000055262 Dis3l2Q8CI75 870 aaKnown RBP22.77■■□□□ 1.24
Vti1b-201ENSMUST00000055262 Zfp646Q6NV66 1788 aa22.76■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Ets1P27577 440 aa22.76■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Zc3h15Q3TIV5 426 aaKnown RBP22.76■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Usp48Q3V0C5 1052 aa22.76■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Zkscan8Q8BSL0 588 aa22.76■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Rrs1Q9CYH6 365 aaKnown RBP22.76■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Sytl4Q9R0Q1 673 aa22.76■■□□□ 1.23
Vti1b-201ENSMUST00000055262 EvplQ9D952 2035 aa22.76■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Glt1d1A4FUP9 346 aa22.75■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Casp1P29452 402 aa22.75■■□□□ 1.23
Vti1b-201ENSMUST00000055262 LifrP42703 1092 aa22.75■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Gtpbp6Q3U6U5 514 aa22.75■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Aldh8a1Q8BH00 487 aa22.75■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Scn11aQ9R053 1765 aa22.75■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Pde8bE9Q4S1 865 aa22.74■■□□□ 1.23
Vti1b-201ENSMUST00000055262 NpcdF8VQB8 469 aa22.74■■□□□ 1.23
Vti1b-201ENSMUST00000055262 GabrdP22933 449 aa22.74■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Plekhf1Q3TB82 279 aa22.74■■□□□ 1.23
Vti1b-201ENSMUST00000055262 FanclQ9CR14 375 aa22.74■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Osbpl5Q9ER64 874 aa22.74■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Gsdma2Q32M21 443 aa22.73■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Ddx46Q569Z5 1032 aaKnown RBP22.73■■□□□ 1.23
Vti1b-201ENSMUST00000055262 NfkbibQ60778 359 aa22.73■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Ly6iQ9WU67 134 aa22.73■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Atg4a-psA0A0G2JFS9 396 aa22.73■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Hoxa7P02830 229 aa22.73■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Lrch1P62046 709 aa22.73■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Znf692Q3U381 531 aa22.73■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Glis3Q6XP49 780 aa22.73■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Atg4aQ8C9S8 396 aa22.73■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Smc5Q8CG46 1101 aaKnown RBP22.73■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Nup98Q6PFD9 1816 aaKnown RBP22.72■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Tpx2A2APB8 745 aaKnown RBP22.72■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Cgnl1Q6AW69 1298 aa22.72■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Fam102bQ8BQS4 339 aa22.72■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Fam122aQ9DB52 284 aa22.72■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Eif6O55135 245 aa22.71■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Psmd1Q3TXS7 953 aa22.71■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Edc3Q8K2D3 508 aaKnown RBP22.71■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Smarca5Q91ZW3 1051 aaKnown RBP22.71■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Gcc1Q9D4H2 778 aa22.71■■□□□ 1.23
Vti1b-201ENSMUST00000055262 Scn9aQ62205 1984 aa22.7■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Setdb1O88974 1307 aa22.7■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Neurod6P48986 337 aa22.7■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Mex3cQ05A36 652 aaKnown RBP22.7■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Mctp2Q5RJH2 878 aa22.7■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Speer4dL7N216 212 aa22.69■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Csrnp1P59054 583 aa22.69■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Map9Q3TRR0 646 aa22.69■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Cetn4Q8K4K1 168 aa22.69■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Sh3bp5lQ99LH9 392 aa22.69■■□□□ 1.22
Vti1b-201ENSMUST00000055262 ParvgQ9ERD8 331 aa22.69■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Nphp3Q7TNH6 1325 aa22.68■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Dcdc2bF7BCK0 340 aa22.68■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Ccdc27Q3V036 639 aa22.68■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Glis2Q8VDL9 521 aa22.68■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Mrpl12Q9DB15 201 aaKnown RBP22.68■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Klf15Q9EPW2 415 aa22.68■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Atp2b3Q0VF55 1220 aa22.67■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Tom1l2Q5SRX1 507 aa22.67■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Pdzrn3Q69ZS0 1063 aa22.67■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Ccdc93Q7TQK5 629 aa22.67■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Col24a1Q30D77 1733 aa22.67■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Rasgrp4Q8BTM9 673 aa22.66■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Terf1P70371 421 aa22.66■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Mcm2P97310 904 aa22.66■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Ccdc51Q3URS9 406 aa22.66■■□□□ 1.22
Vti1b-201ENSMUST00000055262 WdpcpQ8C456 722 aa22.66■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Sf3a1Q8K4Z5 791 aaKnown RBP22.66■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Mtmr2Q9Z2D1 643 aa22.66■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Col1a1P11087 1453 aa22.66■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Gm4340L7N2C4 268 aa22.65■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Timm10P62073 90 aa22.65■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Kiaa0753Q6A000 959 aa22.65■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Fchsd1Q6PFY1 688 aa22.65■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Ift57Q8BXG3 429 aa22.65■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Kcnq5Q9JK45 933 aa22.65■■□□□ 1.22
Vti1b-201ENSMUST00000055262 Bag3Q9JLV1 577 aaKnown RBP22.65■■□□□ 1.22
Vti1b-201ENSMUST00000055262 AaasP58742 546 aa22.64■■□□□ 1.21
Vti1b-201ENSMUST00000055262 4930504O13RikQ8C5Z9 145 aa22.64■■□□□ 1.21
Vti1b-201ENSMUST00000055262 Slc26a8Q8R0C3 999 aa22.64■■□□□ 1.21
Vti1b-201ENSMUST00000055262 Rbm33Q9CXK9 1231 aaKnown RBP22.64■■□□□ 1.21
Vti1b-201ENSMUST00000055262 Tbc1d4Q8BYJ6 1307 aa22.63■■□□□ 1.21
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms