RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Zkscan4Q5SZT6 480 aa9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Tgfb1i1Q62219 461 aa9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Ift57Q8BXG3 429 aa9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Nlgn1Q99K10 843 aa9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 SarnpQ9D1J3 210 aaKnown RBP9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Ugt1a5B2RT14 529 aa9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Stx1aO35526 288 aa9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Scp2P32020 547 aaKnown RBP9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Stat1P42225 749 aa9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Pa2g4P50580 394 aaKnown RBP9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Ube2oQ6ZPJ3 1288 aa9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Sp8Q8BMJ8 486 aa9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 WdpcpQ8C456 722 aa9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Zbtb3Q91X45 518 aa9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Hmg20bQ9Z104 317 aa9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Map2P20357 1828 aa9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Dip2bQ3UH60 1574 aa9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Arfgef2A2A5R2 1792 aa9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Lnx1O70263 728 aa9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Ercc3P49135 783 aa9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Morc2aQ69ZX6 1030 aa9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Rad17Q6NXW6 688 aa9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Il1rapl2Q9ERS6 686 aa9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Kif2aP28740 705 aa9.61□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Paxbp1P58501 919 aa9.61□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Cct2P80314 535 aaKnown RBP9.61□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Cdca8Q8BHX3 289 aa9.61□□□□□ -0.87
Cdc40-201ENSMUST00000044166 CalrP14211 416 aaKnown RBP9.61□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Zbtb45Q52KG4 520 aa9.61□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Arid5bQ8BM75 1188 aaKnown RBP9.61□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Ulbp1Q8HWA3 334 aa9.61□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Mtmr3Q8K296 1196 aa9.61□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Armcx6Q8K3A6 301 aa9.61□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Bag3Q9JLV1 577 aaKnown RBP9.61□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Stk11Q9WTK7 436 aa9.61□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Eif3aP23116 1344 aaKnown RBP9.61□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Eif4a1P60843 406 aaKnown RBP9.61□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Ripply1Q2WG77 201 aa9.61□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Ints4Q8CIM8 964 aa9.61□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Rhot2Q8JZN7 620 aa9.61□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Kcnk13Q8R1P5 405 aa9.61□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Ankrd49Q8VE42 238 aa9.61□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Trap1aP19473 224 aa9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Mdm2P23804 489 aa9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Recql4Q75NR7 1216 aaKnown RBP9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Ppp1r10Q80W00 888 aaKnown RBP9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Zfp317Q8C0Q5 607 aa9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 CrebrfQ8CDG5 640 aaKnown RBP9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Slc26a8Q8R0C3 999 aa9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Odf2lQ9D478 642 aa9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 PhaxQ9JJT9 385 aaKnown RBP9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Ubr1O70481 1757 aa9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Fyb1O35601 819 aa9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Hoxc9P09633 260 aa9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Surf1P09925 306 aa9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Ctr9Q62018 1173 aaKnown RBP9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Cnpy2Q9QXT0 182 aa9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Ccdc112A0AUP1 442 aa9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Fkbp4P30416 458 aa9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Traf1P39428 409 aa9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Ctdnep1Q3TP92 244 aa9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Rbm33Q9CXK9 1231 aaKnown RBP9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Nckap5lQ6GQX2 1323 aa9.6□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Rrp1P56183 494 aaKnown RBP9.59□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Tmem109Q3UBX0 243 aa9.59□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Tshz1Q5DTH5 1084 aa9.59□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Usp28Q5I043 1051 aa9.59□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Tbc1d4Q8BYJ6 1307 aa9.59□□□□□ -0.87
Cdc40-201ENSMUST00000044166 N4bp2F8VQG7 1678 aaKnown RBP9.59□□□□□ -0.87
Cdc40-201ENSMUST00000044166 IghaA0A0A6YXW6 389 aa9.59□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Zfp597E9Q6S0 419 aa9.59□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Gpatch3Q8BIY1 525 aa9.59□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Camta1A2A891 1682 aa9.59□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Adcy9P51830 1353 aa9.59□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Atp6v1aP50516 617 aaKnown RBP9.59□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Anks1aP59672 1150 aa9.59□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Limch1Q3UH68 1057 aa9.59□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Map3k2Q61083 619 aa9.59□□□□□ -0.88
Cdc40-201ENSMUST00000044166 PsapQ61207 557 aaKnown RBP9.59□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Larp1Q6ZQ58 1072 aaKnown RBP9.59□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Pcdhgc5Q91XW9 944 aa9.59□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Rbm5Q91YE7 815 aaKnown RBP9.59□□□□□ -0.88
Cdc40-201ENSMUST00000044166 RubcnlQ3TD16 648 aa9.58□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Naif1Q6PFD7 327 aa9.58□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Spag5Q7TME2 1165 aa9.58□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Edc3Q8K2D3 508 aaKnown RBP9.58□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Pcdhb15Q91Y04 786 aa9.58□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Amotl1Q9D4H4 968 aa9.58□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Dlg5E9Q9R9 1921 aa9.58□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Q8BZJ8 459 aa9.58□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Tmx4Q8C0L0 335 aa9.58□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Saal1Q9D2C2 474 aa9.58□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Col16a1Q8BLX7 1580 aa9.58□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Ahnak2E9PYB0 1738 aaKnown RBP9.58□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Pik3c2aQ61194 1686 aa9.58□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Alpk3Q924C5 1678 aa9.58□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Synpo2Q91YE8 1087 aaKnown RBP9.57□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Bicc1Q99MQ1 977 aaKnown RBP9.57□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Snw1Q9CSN1 536 aaKnown RBP9.57□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Elf2Q9JHC9 593 aa9.57□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms