RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Q8BZJ8 459 aa15.74■□□□□ 0.11
Nup88-201ENSMUST00000035283 Slc39a6Q8C145 765 aa15.74■□□□□ 0.11
Nup88-201ENSMUST00000035283 Lmbrd2Q8C561 694 aa15.74■□□□□ 0.11
Nup88-201ENSMUST00000035283 Rims2Q9EQZ7 1530 aa15.73■□□□□ 0.11
Nup88-201ENSMUST00000035283 Nfat5Q9WV30 1534 aa15.73■□□□□ 0.11
Nup88-201ENSMUST00000035283 AppP12023 770 aa15.73■□□□□ 0.11
Nup88-201ENSMUST00000035283 L1td1Q587J6 782 aaKnown RBP15.73■□□□□ 0.11
Nup88-201ENSMUST00000035283 Prkab2Q6PAM0 271 aa15.73■□□□□ 0.11
Nup88-201ENSMUST00000035283 Rgs9O54828 675 aa15.73■□□□□ 0.11
Nup88-201ENSMUST00000035283 Ms4a1P19437 291 aa15.73■□□□□ 0.11
Nup88-201ENSMUST00000035283 Cyp2d10P24456 504 aa15.73■□□□□ 0.11
Nup88-201ENSMUST00000035283 Q8C5K5 320 aa15.73■□□□□ 0.11
Nup88-201ENSMUST00000035283 Gm10471E9Q1C7 252 aa15.72■□□□□ 0.11
Nup88-201ENSMUST00000035283 Ccdc129Q14B48 1034 aa15.72■□□□□ 0.11
Nup88-201ENSMUST00000035283 Ccdc82Q6PG04 518 aa15.72■□□□□ 0.11
Nup88-201ENSMUST00000035283 Tomm22Q9CPQ3 142 aa15.72■□□□□ 0.11
Nup88-201ENSMUST00000035283 Fam84aQ9D650 292 aa15.72■□□□□ 0.11
Nup88-201ENSMUST00000035283 Pdzd9Q9D9M4 266 aa15.72■□□□□ 0.11
Nup88-201ENSMUST00000035283 Zkscan5Q9Z1D8 819 aa15.72■□□□□ 0.11
Nup88-201ENSMUST00000035283 Ubap1lG3UW59 384 aa15.72■□□□□ 0.11
Nup88-201ENSMUST00000035283 Sh3bp1P55194 680 aa15.72■□□□□ 0.11
Nup88-201ENSMUST00000035283 Anks1aP59672 1150 aa15.72■□□□□ 0.11
Nup88-201ENSMUST00000035283 Irx2P81066 474 aa15.72■□□□□ 0.11
Nup88-201ENSMUST00000035283 Ncoa4Q5U4H9 625 aa15.72■□□□□ 0.11
Nup88-201ENSMUST00000035283 Fsd1Q7TPM6 496 aa15.72■□□□□ 0.11
Nup88-201ENSMUST00000035283 Gpatch3Q8BIY1 525 aa15.72■□□□□ 0.11
Nup88-201ENSMUST00000035283 Col4a3bpQ9EQG9 624 aa15.72■□□□□ 0.11
Nup88-201ENSMUST00000035283 Elf2Q9JHC9 593 aa15.72■□□□□ 0.11
Nup88-201ENSMUST00000035283 InsrrQ9WTL4 1300 aa15.71■□□□□ 0.11
Nup88-201ENSMUST00000035283 Fbxl16A2RT62 479 aa15.71■□□□□ 0.11
Nup88-201ENSMUST00000035283 Znf568E9PYI1 671 aa15.71■□□□□ 0.11
Nup88-201ENSMUST00000035283 Cyp2d34L7N463 504 aa15.71■□□□□ 0.11
Nup88-201ENSMUST00000035283 Stac3Q8BZ71 360 aa15.71■□□□□ 0.11
Nup88-201ENSMUST00000035283 Pms1Q8K119 917 aa15.71■□□□□ 0.11
Nup88-201ENSMUST00000035283 Ccer1Q9CQL2 403 aa15.71■□□□□ 0.11
Nup88-201ENSMUST00000035283 PigbQ9JJQ0 542 aa15.71■□□□□ 0.11
Nup88-201ENSMUST00000035283 Cnnm1Q0GA42 951 aa15.71■□□□□ 0.1
Nup88-201ENSMUST00000035283 Hps3Q91VB4 1002 aa15.71■□□□□ 0.1
Nup88-201ENSMUST00000035283 Samsn1P57725 372 aa15.7■□□□□ 0.1
Nup88-201ENSMUST00000035283 Cdca8Q8BHX3 289 aa15.7■□□□□ 0.1
Nup88-201ENSMUST00000035283 Golim4Q8BXA1 655 aa15.7■□□□□ 0.1
Nup88-201ENSMUST00000035283 Pramel3A2AHA7 463 aa15.7■□□□□ 0.1
Nup88-201ENSMUST00000035283 Gm7903A2AWL1 463 aa15.7■□□□□ 0.1
Nup88-201ENSMUST00000035283 AV320801A2AWL3 467 aa15.7■□□□□ 0.1
Nup88-201ENSMUST00000035283 Gm15023L7MUB4 467 aa15.7■□□□□ 0.1
Nup88-201ENSMUST00000035283 Bin1O08539 588 aaKnown RBP15.7■□□□□ 0.1
Nup88-201ENSMUST00000035283 Gm21985Q6P6P5 1106 aa15.7■□□□□ 0.1
Nup88-201ENSMUST00000035283 Ripor2Q80U16 1078 aa15.7■□□□□ 0.1
Nup88-201ENSMUST00000035283 Dnaaf4Q8R368 420 aa15.7■□□□□ 0.1
Nup88-201ENSMUST00000035283 Trim59Q922Y2 403 aa15.7■□□□□ 0.1
Nup88-201ENSMUST00000035283 Fam114a1Q9D281 569 aa15.7■□□□□ 0.1
Nup88-201ENSMUST00000035283 Vps33aQ9D2N9 598 aa15.7■□□□□ 0.1
Nup88-201ENSMUST00000035283 Odf2lQ9D478 642 aa15.7■□□□□ 0.1
Nup88-201ENSMUST00000035283 MypnQ5DTJ9 1315 aa15.69■□□□□ 0.1
Nup88-201ENSMUST00000035283 Iqsec3Q3TES0 1195 aa15.69■□□□□ 0.1
Nup88-201ENSMUST00000035283 Ints4Q8CIM8 964 aa15.69■□□□□ 0.1
Nup88-201ENSMUST00000035283 Frat2Q8K025 231 aa15.69■□□□□ 0.1
Nup88-201ENSMUST00000035283 Creld2Q9CYA0 350 aa15.69■□□□□ 0.1
Nup88-201ENSMUST00000035283 Pes1Q9EQ61 584 aaKnown RBP15.69■□□□□ 0.1
Nup88-201ENSMUST00000035283 Xpo4Q9ESJ0 1151 aa15.69■□□□□ 0.1
Nup88-201ENSMUST00000035283 Robo1O89026 1612 aa15.69■□□□□ 0.1
Nup88-201ENSMUST00000035283 Exosc10P56960 887 aaKnown RBP15.69■□□□□ 0.1
Nup88-201ENSMUST00000035283 Cers3Q1A3B0 383 aa15.69■□□□□ 0.1
Nup88-201ENSMUST00000035283 Tmem87bQ8BKU8 555 aa15.69■□□□□ 0.1
Nup88-201ENSMUST00000035283 Gimap6Q8K349 305 aa15.69■□□□□ 0.1
Nup88-201ENSMUST00000035283 Kcnh5Q920E3 988 aa15.69■□□□□ 0.1
Nup88-201ENSMUST00000035283 C3P01027 1663 aa15.69■□□□□ 0.1
Nup88-201ENSMUST00000035283 Timm10P62073 90 aa15.68■□□□□ 0.1
Nup88-201ENSMUST00000035283 Kiaa1524Q8BWY9 907 aa15.68■□□□□ 0.1
Nup88-201ENSMUST00000035283 Alg3Q8K2A8 438 aa15.68■□□□□ 0.1
Nup88-201ENSMUST00000035283 BrapQ99MP8 591 aa15.68■□□□□ 0.1
Nup88-201ENSMUST00000035283 Clic4Q9QYB1 253 aa15.68■□□□□ 0.1
Nup88-201ENSMUST00000035283 Tpm1P58771 284 aa15.68■□□□□ 0.1
Nup88-201ENSMUST00000035283 Ltv1Q6NSQ7 470 aaKnown RBP15.68■□□□□ 0.1
Nup88-201ENSMUST00000035283 Soga3Q6NZL0 945 aa15.68■□□□□ 0.1
Nup88-201ENSMUST00000035283 Rufy2Q8R4C2 606 aa15.68■□□□□ 0.1
Nup88-201ENSMUST00000035283 RbsnQ80Y56 783 aa15.67■□□□□ 0.1
Nup88-201ENSMUST00000035283 Ddx27Q921N6 760 aaKnown RBP15.67■□□□□ 0.1
Nup88-201ENSMUST00000035283 Erc1Q99MI1 1120 aa15.67■□□□□ 0.1
Nup88-201ENSMUST00000035283 Itga6Q61739 1091 aa15.67■□□□□ 0.1
Nup88-201ENSMUST00000035283 Ehd2Q8BH64 543 aa15.67■□□□□ 0.1
Nup88-201ENSMUST00000035283 Dnm3Q8BZ98 863 aa15.67■□□□□ 0.1
Nup88-201ENSMUST00000035283 Rbm17Q8JZX4 405 aaKnown RBP15.67■□□□□ 0.1
Nup88-201ENSMUST00000035283 Rrs1Q9CYH6 365 aaKnown RBP15.67■□□□□ 0.1
Nup88-201ENSMUST00000035283 Ddx60E9PZQ1 1711 aa15.66■□□□□ 0.1
Nup88-201ENSMUST00000035283 Hspd1P63038 573 aaKnown RBP15.66■□□□□ 0.1
Nup88-201ENSMUST00000035283 Vgll3P85442 326 aa15.66■□□□□ 0.1
Nup88-201ENSMUST00000035283 Ercc6lQ8BHK9 1240 aa15.66■□□□□ 0.1
Nup88-201ENSMUST00000035283 Luzp1Q8R4U7 1068 aaKnown RBP15.66■□□□□ 0.1
Nup88-201ENSMUST00000035283 Col15a1O35206 1367 aa15.66■□□□□ 0.1
Nup88-201ENSMUST00000035283 Nbr1P97432 988 aa15.66■□□□□ 0.1
Nup88-201ENSMUST00000035283 Panx2Q6IMP4 677 aa15.66■□□□□ 0.1
Nup88-201ENSMUST00000035283 Trim56Q80VI1 734 aaKnown RBP15.66■□□□□ 0.1
Nup88-201ENSMUST00000035283 Ulbp1Q8HWA3 334 aa15.66■□□□□ 0.1
Nup88-201ENSMUST00000035283 Terf2ipQ91VL8 393 aa15.66■□□□□ 0.1
Nup88-201ENSMUST00000035283 Ess2O70279 479 aa15.65■□□□□ 0.1
Nup88-201ENSMUST00000035283 Scaf1Q5U4C3 1256 aaKnown RBP15.65■□□□□ 0.1
Nup88-201ENSMUST00000035283 Mei4Q8BRM6 389 aa15.65■□□□□ 0.1
Nup88-201ENSMUST00000035283 Mei1Q9D4I2 1268 aa15.65■□□□□ 0.1
Nup88-201ENSMUST00000035283 CoblQ5NBX1 1337 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms