RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Fez2Q6TYB5 348 aa12.33□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Srgap1Q91Z69 1062 aa12.33□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Proca1B0QZF7 307 aa12.32□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Washc4Q3UMB9 1173 aa12.32□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Ccdc82Q6PG04 518 aa12.32□□□□□ -0.44
Rnf40-201ENSMUST00000033088 U2af1l4Q8BGJ9 220 aa12.32□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Orc1Q9Z1N2 840 aaKnown RBP12.32□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Atp12aQ9Z1W8 1035 aa12.32□□□□□ -0.44
Rnf40-201ENSMUST00000033088 ChkbO55229 394 aa12.32□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Dnm1P39053 867 aa12.32□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Zranb3Q6NZP1 1069 aa12.32□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Sil1Q9EPK6 465 aa12.32□□□□□ -0.44
Rnf40-201ENSMUST00000033088 PtpruB1AUH1 1446 aa12.32□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Ca8P28651 291 aa12.32□□□□□ -0.44
Rnf40-201ENSMUST00000033088 TbcaP48428 108 aaKnown RBP12.32□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Btbd11Q6GQW0 1109 aa12.32□□□□□ -0.44
Rnf40-201ENSMUST00000033088 RbsnQ80Y56 783 aa12.32□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Dydc1Q9D9T0 175 aa12.32□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Atp1a4Q9WV27 1032 aa12.32□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Alpk3Q924C5 1678 aa12.32□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Bbof1Q3V079 533 aa12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Atf7Q8R0S1 413 aa12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 ScaperF8VQ70 1398 aaKnown RBP12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Art2aP17981 287 aa12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Pkp1P97350 728 aaKnown RBP12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Map3k2Q61083 619 aa12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Ctr9Q62018 1173 aaKnown RBP12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Ccdc47Q9D024 483 aaKnown RBP12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Rai14Q9EP71 979 aaKnown RBP12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Xpo4Q9ESJ0 1151 aa12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Rreb1Q3UH06 1700 aaKnown RBP12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Ccdc112A0AUP1 442 aa12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Ces1hD3Z298 562 aa12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Lrrc6O88978 473 aa12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 VeztQ3ZK22 780 aa12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Pcdhb15Q91Y04 786 aa12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Tab2Q99K90 693 aa12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Fam50bQ9WTJ8 334 aa12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Ap5z1Q3U829 807 aa12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Kri1Q8VDQ9 704 aaKnown RBP12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Gps2Q921N8 327 aa12.31□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Ktn1Q61595 1327 aaKnown RBP12.3□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Sdc2P43407 202 aa12.3□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Pafah1b1P63005 410 aaKnown RBP12.3□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Trak2Q6P9N8 913 aa12.3□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Baiap2l1Q9DBJ3 514 aa12.3□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Pik3c2bE9QAN8 1632 aa12.3□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Topaz1E5FYH1 1653 aa12.3□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Vwa3bJ9JI28 736 aa12.3□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Acnat2Q8BGG9 420 aa12.3□□□□□ -0.44
Rnf40-201ENSMUST00000033088 DymQ8CHY3 669 aa12.3□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Ppp4r3bQ922R5 820 aa12.3□□□□□ -0.44
Rnf40-201ENSMUST00000033088 GmnnO88513 206 aa12.3□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Kif2aP28740 705 aa12.3□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Vps54Q5SPW0 977 aa12.3□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Kank4Q6P9J5 1016 aa12.3□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Dennd6aQ8BH65 605 aa12.3□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Tango6Q8C3S2 1079 aa12.3□□□□□ -0.44
Rnf40-201ENSMUST00000033088 2310002L09RikQ9D7L5 217 aa12.3□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Usp32F8VPZ3 1604 aa12.29□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Exoc3l2D3YUP5 789 aa12.29□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Ppp1r15aP17564 657 aa12.29□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Atp8b2P98199 1209 aa12.29□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Cyp4f39Q8BGU0 532 aa12.29□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Epc1Q8C9X6 813 aa12.29□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Arl8aQ8VEH3 186 aa12.29□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Mcmdc2E9Q956 681 aa12.29□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Tax1bp1Q3UKC1 814 aaKnown RBP12.29□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Myl10Q62082 202 aa12.29□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Ift122Q6NWV3 1182 aa12.29□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Sorbs3Q9R1Z8 733 aa12.29□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Cct4P80315 539 aaKnown RBP12.29□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Map3k11Q80XI6 850 aa12.29□□□□□ -0.44
Rnf40-201ENSMUST00000033088 4930504O13RikQ8C5Z9 145 aa12.29□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Ppfibp1Q8C8U0 969 aaKnown RBP12.29□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Ano2Q8CFW1 1002 aa12.29□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Smc1aQ9CU62 1233 aaKnown RBP12.29□□□□□ -0.44
Rnf40-201ENSMUST00000033088 LyarQ08288 388 aaKnown RBP12.28□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Cdc45Q9Z1X9 566 aa12.28□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Tnrc6bQ8BKI2 1810 aaKnown RBP12.28□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Nlrp2Q4PLS0 1046 aaKnown RBP12.28□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Kcnf1Q7TSH7 493 aa12.28□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Eif4a2P10630 407 aa12.28□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Als2cr12Q8BVM7 383 aa12.28□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Mrpl44Q9CY73 333 aaKnown RBP12.28□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Abcb6Q9DC29 842 aa12.28□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Tlr7P58681 1050 aa12.27□□□□□ -0.44
Rnf40-201ENSMUST00000033088 March6Q6ZQ89 909 aa12.27□□□□□ -0.44
Rnf40-201ENSMUST00000033088 EngaseQ8BX80 734 aa12.27□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Mrpl50Q8VDT9 159 aaKnown RBP12.27□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Ttc21aQ8C0S4 1314 aa12.27□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Spata31d1bE9QA57 1361 aa12.27□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Rbbp8nlA2ABX0 614 aa12.27□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Elmsan1E9Q2I4 1089 aaKnown RBP12.27□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Lrrc8aQ80WG5 810 aa12.27□□□□□ -0.45
Rnf40-201ENSMUST00000033088 AidaQ8C4Q6 305 aa12.27□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Kcnk13Q8R1P5 405 aa12.27□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Pik3ap1Q9EQ32 811 aa12.27□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Acot9Q9R0X4 439 aaKnown RBP12.27□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Samd15F6XZJ7 620 aa12.27□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms