RNA–Protein interactions for RNA: ENSMUST00000029682.10

Thbs3-201, Transcript of Thrombospondin-3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Thbs3, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3-201ENSMUST00000029682 NpeppsQ11011 920 aa10.92□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Ric1Q69ZJ7 1422 aa10.92□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Nop14Q8R3N1 860 aaKnown RBP10.92□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Prl7a2O54831 253 aa10.92□□□□□ -0.66
Thbs3-201ENSMUST00000029682 CebpzP53569 1052 aaKnown RBP10.92□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Nlrp1aQ2LKU9 1182 aa10.92□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Nxf2Q4ZGD8 691 aa10.92□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Prdm4Q80V63 803 aa10.92□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Ptcd1Q8C2E4 695 aaKnown RBP10.92□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Erc1Q99MI1 1120 aa10.92□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Kansl3A2RSY1 903 aaKnown RBP10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Ppp4r3aQ6P2K6 820 aa10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Prl3d3A0A0M6L0J6 224 aa10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Cfap58B2RW38 873 aa10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 TrdnE9Q9K5 693 aa10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Sult6b1P0CC03 303 aa10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Limch1Q3UH68 1057 aa10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Smarcc2Q6PDG5 1213 aa10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Ccdc158Q8CDI6 1109 aa10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Rassf8Q8CJ96 419 aa10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Ssfa2Q922B9 1252 aa10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Hmgn5Q9JL35 406 aa10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Slit1Q80TR4 1531 aa10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Gm45140A0A0N4SUM8 220 aa10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Ccdc129Q14B48 1034 aa10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Ddx17Q501J6 650 aaKnown RBP10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Usp28Q5I043 1051 aa10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 NfkbibQ60778 359 aa10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Zfp251Q6PCX8 632 aa10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Ercc6lQ8BHK9 1240 aa10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Efcab2Q9CQ46 164 aa10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Sh3bp5Q9Z131 463 aa10.91□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Syde2E9PUP1 1314 aa10.9□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Gm973E9Q295 1059 aa10.9□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Cyp2d10P24456 504 aa10.9□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Ifit1Q64282 463 aa10.9□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Zbtb40Q6PCS8 1258 aa10.9□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Golim4Q8BXA1 655 aa10.9□□□□□ -0.66
Thbs3-201ENSMUST00000029682 4930572O03RikQ8C5Y0 211 aa10.9□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Trim30aP15533 496 aa10.9□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Timm10P62073 90 aa10.9□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Atg9aQ68FE2 551 aa10.9□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Fbxo41Q6NS60 873 aa10.9□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Tmx1Q8VBT0 278 aa10.9□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Rrs1Q9CYH6 365 aaKnown RBP10.9□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Irx4Q9QY61 515 aa10.9□□□□□ -0.66
Thbs3-201ENSMUST00000029682 Col22a1E9Q7P1 1613 aa10.9□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Flad1Q8R123 492 aa10.89□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Tmc2Q8R4P4 888 aa10.89□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Nrbp1Q99J45 535 aa10.89□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Osbpl5Q9ER64 874 aa10.89□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Aox4Q3TYQ9 1336 aa10.89□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Ubr2Q6WKZ8 1755 aa10.89□□□□□ -0.67
Thbs3-201ENSMUST00000029682 FosbP13346 338 aa10.89□□□□□ -0.67
Thbs3-201ENSMUST00000029682 ZyxQ62523 564 aa10.89□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Trim52Q8CDV4 233 aa10.89□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Eif3bQ8JZQ9 803 aaKnown RBP10.89□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Mtmr3Q8K296 1196 aa10.89□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Tomm22Q9CPQ3 142 aa10.89□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Tnks1bp1P58871 1720 aa10.89□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Tmem109Q3UBX0 243 aa10.89□□□□□ -0.67
Thbs3-201ENSMUST00000029682 TrhQ62361 256 aa10.89□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Gm21985Q6P6P5 1106 aa10.89□□□□□ -0.67
Thbs3-201ENSMUST00000029682 RbsnQ80Y56 783 aa10.89□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Lmbrd2Q8C561 694 aa10.89□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Mrpl44Q9CY73 333 aaKnown RBP10.89□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Gm21663A0A0G2JE01 267 aa10.88□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Gm7361D3Z6R1 267 aa10.88□□□□□ -0.67
Thbs3-201ENSMUST00000029682 5031410I06RikE9Q4E0 267 aa10.88□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Gm1979E9QAN3 267 aa10.88□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Gm5862K7N5V5 267 aa10.88□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Gm10220K7N660 267 aa10.88□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Tpd52l1O54818 204 aa10.88□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Exosc10P56960 887 aaKnown RBP10.88□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Cct2P80314 535 aaKnown RBP10.88□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Fam102bQ8BQS4 339 aa10.88□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Sos2Q02384 1333 aa10.88□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Ubn2Q80WC1 1314 aa10.88□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Cdk4P30285 303 aa10.88□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Ppfia3P60469 1194 aa10.88□□□□□ -0.67
Thbs3-201ENSMUST00000029682 RgmbQ7TQ33 436 aa10.88□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Nxf7Q80SZ6 620 aaKnown RBP10.88□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Tsen34Q8BMZ5 316 aa10.88□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Slc5a1Q8C3K6 665 aa10.88□□□□□ -0.67
Thbs3-201ENSMUST00000029682 BrapQ99MP8 591 aa10.88□□□□□ -0.67
Thbs3-201ENSMUST00000029682 AtrnQ9WU60 1428 aa10.88□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Oas2E9Q9A9 742 aa10.87□□□□□ -0.67
Thbs3-201ENSMUST00000029682 RdxP26043 583 aaKnown RBP10.87□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Hspd1P63038 573 aaKnown RBP10.87□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Ano6Q6P9J9 911 aa10.87□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Ccdc112A0AUP1 442 aa10.87□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Zpr1Q62384 459 aa10.87□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Pms1Q8K119 917 aa10.87□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Trim59Q922Y2 403 aa10.87□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Speer4bQ9D9F7 267 aa10.87□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Stard3nlQ9DCI3 235 aa10.87□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Pde3aQ9Z0X4 1141 aa10.87□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Rgs9O54828 675 aa10.87□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Clec11aO88200 328 aa10.87□□□□□ -0.67
Thbs3-201ENSMUST00000029682 Podxl2Q8CAE9 603 aa10.87□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms