RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 KCNMB1Q16558 191 aa9.22□□□□□ -0.93
LIG1-210ENST00000596332 FAM27BQ5VT28 67 aa9.22□□□□□ -0.93
LIG1-210ENST00000596332 OR7E24Q6IFN5 339 aa9.22□□□□□ -0.93
LIG1-210ENST00000596332 SLC27A4Q6P1M0 643 aa9.22□□□□□ -0.93
LIG1-210ENST00000596332 LEG1Q6P5S2 330 aa9.22□□□□□ -0.93
LIG1-210ENST00000596332 LYPD4Q6UWN0 246 aa9.22□□□□□ -0.93
LIG1-210ENST00000596332 P2RY8Q86VZ1 359 aa9.22□□□□□ -0.93
LIG1-210ENST00000596332 ZNF584Q8IVC4 421 aa9.22□□□□□ -0.93
LIG1-210ENST00000596332 C17orf78Q8N4C9 275 aa9.22□□□□□ -0.93
LIG1-210ENST00000596332 SLC22A24Q8N4F4 322 aa9.22□□□□□ -0.93
LIG1-210ENST00000596332 LILRB1Q8NHL6 650 aaPredicted RBP9.22□□□□□ -0.93
LIG1-210ENST00000596332 FAM222BQ8WU58 562 aa9.22□□□□□ -0.93
LIG1-210ENST00000596332 NSMAFQ92636 917 aa9.22□□□□□ -0.93
LIG1-210ENST00000596332 FBXO17Q96EF6 278 aa9.22□□□□□ -0.93
LIG1-210ENST00000596332 FOXN4Q96NZ1 517 aa9.22□□□□□ -0.93
LIG1-210ENST00000596332 HS3ST6Q96QI5 342 aa9.22□□□□□ -0.93
LIG1-210ENST00000596332 RBP7Q96R05 134 aa9.22□□□□□ -0.93
LIG1-210ENST00000596332 SH3GL3Q99963 347 aa9.22□□□□□ -0.93
LIG1-210ENST00000596332 RBM4BQ9BQ04 359 aaKnown RBP9.22□□□□□ -0.93
LIG1-210ENST00000596332 MED20Q9H944 212 aa9.22□□□□□ -0.93
LIG1-210ENST00000596332 SRA1Q9HD15 236 aaKnown RBP9.22□□□□□ -0.93
LIG1-210ENST00000596332 MRPL22Q9NWU5 206 aaKnown RBP9.22□□□□□ -0.93
LIG1-210ENST00000596332 BAIAP2Q9UQB8 552 aa9.22□□□□□ -0.93
LIG1-210ENST00000596332 RRP15Q9Y3B9 282 aaKnown RBP9.22□□□□□ -0.93
LIG1-210ENST00000596332 TACC2O95359 2948 aa9.21□□□□□ -0.93
LIG1-210ENST00000596332 CIB4A0PJX0 185 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 FAM183AA6NL82 134 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 CYSRT1A8MQ03 144 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 FAM171A2A8MVW0 826 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 H3BN98 237 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 KRT33AO76009 404 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 SNAP29O95721 258 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 IGKV3-15P01624 115 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 IGLV1-44P01699 117 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 HLA-HP01893 362 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 HRGP04196 525 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 GYPBP06028 91 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 B4GALT1P15291 398 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 PPP3CBP16298 524 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 IL32P24001 234 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 IGFBP5P24593 272 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 SLC25A1P53007 311 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 SH3BGRP55822 239 aaPredicted RBP9.21□□□□□ -0.94
LIG1-210ENST00000596332 KRTAP10-9P60411 292 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 HIST1H3AP68431 136 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 CD47Q08722 323 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 RSPO1Q2MKA7 263 aaPredicted RBP9.21□□□□□ -0.94
LIG1-210ENST00000596332 ZIK1Q3SY52 487 aaPredicted RBP9.21□□□□□ -0.94
LIG1-210ENST00000596332 NRN1LQ496H8 165 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 HIST2H3PS2Q5TEC6 136 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 ZNF813Q6ZN06 617 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 ZBTB49Q6ZSB9 765 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 HIST2H3AQ71DI3 136 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 HDDC2Q7Z4H3 204 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 ABHD12BQ7Z5M8 362 aaPredicted RBP9.21□□□□□ -0.94
LIG1-210ENST00000596332 BCDIN3DQ7Z5W3 292 aaKnown RBP9.21□□□□□ -0.94
LIG1-210ENST00000596332 BBS1Q8NFJ9 593 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 SLC26A10Q8NG04 563 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 OR52L1Q8NGH7 329 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 OR9Q1Q8NGQ5 310 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 OR52N5Q8NH56 324 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 TEX47Q8TBZ9 253 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 FNDC8Q8TC99 324 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 STMN2Q93045 179 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 ZC3HAV1LQ96H79 300 aaKnown RBP9.21□□□□□ -0.94
LIG1-210ENST00000596332 HRASLS5Q96KN8 279 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 USB1Q9BQ65 265 aaKnown RBP9.21□□□□□ -0.94
LIG1-210ENST00000596332 TMEM204Q9BSN7 226 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 C9orf16Q9BUW7 83 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 C1QTNF6Q9BXI9 259 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 RACGAP1Q9H0H5 632 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 TOR3AQ9H497 397 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 ZNF556Q9HAH1 456 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 SIAEQ9HAT2 523 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 RNPEPL1Q9HAU8 725 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 B3GAT2Q9NPZ5 323 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 HINT3Q9NQE9 182 aaKnown RBP9.21□□□□□ -0.94
LIG1-210ENST00000596332 RPRD1BQ9NQG5 326 aaKnown RBP9.21□□□□□ -0.94
LIG1-210ENST00000596332 POLE4Q9NR33 117 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 ZNF226Q9NYT6 803 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 KCNN3Q9UGI6 736 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 NDRG4Q9ULP0 352 aaKnown RBP9.21□□□□□ -0.94
LIG1-210ENST00000596332 FKBP7Q9Y680 259 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 FLNBO75369 2602 aaKnown RBP9.21□□□□□ -0.94
LIG1-210ENST00000596332 APCP25054 2843 aa9.21□□□□□ -0.94
LIG1-210ENST00000596332 PKDREJQ9NTG1 2253 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 A6NNC1 897 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 XKRYO14609 159 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 KHDRBS3O75525 346 aaKnown RBP9.2□□□□□ -0.94
LIG1-210ENST00000596332 CTAG2O75638 210 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 PLAUP00749 431 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 CELA3BP08861 270 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 CBR1P16152 277 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 ZNF14P17017 642 aaPredicted RBP9.2□□□□□ -0.94
LIG1-210ENST00000596332 SPI1P17947 270 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 GABRB1P18505 474 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 LAP3P28838 519 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 PYCR1P32322 319 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 GGT2P36268 569 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 ADARB1P78563 741 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms