RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 PTGES3LE9PB15 166 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 J3QRE1 110 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 DHHO43323 396 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 SMNDC1O75940 238 aaKnown RBP eCLIP13.16□□□□□ -0.3
VPS18-202ENST00000558474 RAB36O95755 333 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 GYPBP06028 91 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 RPSAP08865 295 aaKnown RBP13.16□□□□□ -0.3
VPS18-202ENST00000558474 SBK2P0C263 348 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 LAP3P28838 519 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 CEACAM8P31997 349 aaPredicted RBP13.16□□□□□ -0.3
VPS18-202ENST00000558474 NTF4P34130 210 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 ATP6V1E1P36543 226 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 GUCA1AP43080 201 aaPredicted RBP13.16□□□□□ -0.3
VPS18-202ENST00000558474 OR3A2P47893 321 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 ZNF84P51523 738 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 ACTC1P68032 377 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 ACTA1P68133 377 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 HSF2Q03933 536 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 ST3GAL4Q11206 333 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 NFATC3Q12968 1075 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 KCNMB1Q16558 191 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 NRN1LQ496H8 165 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 CARD17Q5XLA6 110 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 TMEM211Q6ICI0 200 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 LRFN4Q6PJG9 635 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 ZNF773Q6PK81 442 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 FOXL2NBQ6ZUU3 175 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 AHSA2Q719I0 299 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 ZNF100Q8IYN0 542 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 TSPAN14Q8NG11 270 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 OR6K6Q8NGW6 343 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 TSSK2Q96PF2 358 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 SIGLEC11Q96RL6 698 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 CNN2Q99439 309 aaKnown RBP13.16□□□□□ -0.3
VPS18-202ENST00000558474 CDCA4Q9BXL8 241 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 ULBP2Q9BZM5 246 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 YIPF3Q9GZM5 350 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 PAK1IP1Q9NWT1 392 aaPredicted RBP13.16□□□□□ -0.3
VPS18-202ENST00000558474 KCNG2Q9UJ96 466 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 EXOSC1Q9Y3B2 195 aaKnown RBP13.16□□□□□ -0.3
VPS18-202ENST00000558474 SNX5Q9Y5X3 404 aa13.16□□□□□ -0.3
VPS18-202ENST00000558474 PHF3Q92576 2039 aaKnown RBP13.15□□□□□ -0.3
VPS18-202ENST00000558474 MED12LQ86YW9 2145 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 TRIM64CA6NLI5 447 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 IL18BPO95998 194 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 IGHA1P01876 353 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 OR2T7P0C7T2 308 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 NPR2P20594 1047 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 PYCR1P32322 319 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 PER3P56645 1201 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 MVKQ03426 396 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 FMODQ06828 376 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 TEX30Q5JUR7 227 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 SEM1Q6ZVN7 128 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 SLC16A9Q7RTY1 509 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 TIGD4Q8IY51 512 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 SVOPQ8N4V2 548 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 OR52I1Q8NGK6 324 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 OR2T27Q8NH04 317 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 ZNF775Q96BV0 537 aaPredicted RBP13.15□□□□□ -0.3
VPS18-202ENST00000558474 TTYH2Q9BSA4 534 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 WACQ9BTA9 647 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 ADGRL4Q9HBW9 690 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 PLSCR4Q9NRQ2 329 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 CLEC4AQ9UMR7 237 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 COA3Q9Y2R0 106 aaPredicted RBP13.15□□□□□ -0.3
VPS18-202ENST00000558474 TMEM14AQ9Y6G1 99 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 DOCK7Q96N67 2140 aa13.15□□□□□ -0.3
VPS18-202ENST00000558474 ITPR1Q14643 2758 aa13.15□□□□□ -0.31
VPS18-202ENST00000558474 PIEZO2Q9H5I5 2752 aa13.15□□□□□ -0.31
VPS18-202ENST00000558474 HSPB2A8KAH6 182 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 E9PLN8 166 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 PHYHO14832 338 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 ZNHIT1O43257 154 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 UPK3AO75631 287 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 KRT33AO76009 404 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 TMIGD3P0DMS9 266 aaPredicted RBP13.14□□□□□ -0.31
VPS18-202ENST00000558474 GLI4P10075 376 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 GAAP10253 952 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 KIR2DL2P43627 348 aaPredicted RBP13.14□□□□□ -0.31
VPS18-202ENST00000558474 SH3BGRP55822 239 aaPredicted RBP13.14□□□□□ -0.31
VPS18-202ENST00000558474 LSM6P62312 80 aaKnown RBP13.14□□□□□ -0.31
VPS18-202ENST00000558474 MRPS34P82930 218 aaKnown RBP13.14□□□□□ -0.31
VPS18-202ENST00000558474 HSPB2Q16082 182 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 PCK2Q16822 640 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 TSPO2Q5TGU0 170 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 FBXW9Q5XUX1 488 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 PLXDC2Q6UX71 529 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 ZNF627Q7L945 461 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 SHFQ7M4L6 423 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 NUFIP2Q7Z417 695 aaKnown RBP13.14□□□□□ -0.31
VPS18-202ENST00000558474 ATCAYQ86WG3 371 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 ACBD7Q8N6N7 88 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 SLC26A10Q8NG04 563 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 OR51G2Q8NGK0 314 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 ZNRF4Q8WWF5 429 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 ZMYND19Q96E35 227 aaPredicted RBP13.14□□□□□ -0.31
VPS18-202ENST00000558474 MRPL48Q96GC5 212 aaKnown RBP13.14□□□□□ -0.31
VPS18-202ENST00000558474 INTS14Q96SY0 518 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 VKORC1Q9BQB6 163 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms