RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 FN1P02751 2386 aaKnown RBP13.43□□□□□ -0.26
CAPN1-213ENST00000527897 DCTN3O75935 186 aa13.42□□□□□ -0.26
CAPN1-213ENST00000527897 DIRAS1O95057 198 aa13.42□□□□□ -0.26
CAPN1-213ENST00000527897 CCL2P13500 99 aa13.42□□□□□ -0.26
CAPN1-213ENST00000527897 NR4A1P22736 598 aa13.42□□□□□ -0.26
CAPN1-213ENST00000527897 RPL4P36578 427 aaKnown RBP13.42□□□□□ -0.26
CAPN1-213ENST00000527897 RPL27P61353 136 aaKnown RBP13.42□□□□□ -0.26
CAPN1-213ENST00000527897 PRKCDQ05655 676 aa13.42□□□□□ -0.26
CAPN1-213ENST00000527897 EFNB3Q15768 340 aa13.42□□□□□ -0.26
CAPN1-213ENST00000527897 SGCAQ16586 387 aa13.42□□□□□ -0.26
CAPN1-213ENST00000527897 HIST3H3Q16695 136 aa13.42□□□□□ -0.26
CAPN1-213ENST00000527897 SLC36A2Q495M3 483 aa13.42□□□□□ -0.26
CAPN1-213ENST00000527897 ARMC4Q5T2S8 1044 aa13.42□□□□□ -0.26
CAPN1-213ENST00000527897 MBOAT2Q6ZWT7 520 aa13.42□□□□□ -0.26
CAPN1-213ENST00000527897 FAM86B1Q8N7N1 296 aa13.42□□□□□ -0.26
CAPN1-213ENST00000527897 CLDN22Q8N7P3 220 aa13.42□□□□□ -0.26
CAPN1-213ENST00000527897 OR10H5Q8NGA6 315 aa13.42□□□□□ -0.26
CAPN1-213ENST00000527897 ZNF75AQ96N20 296 aa13.42□□□□□ -0.26
CAPN1-213ENST00000527897 KCNN2Q9H2S1 579 aa13.42□□□□□ -0.26
CAPN1-213ENST00000527897 DENND2DQ9H6A0 471 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-213ENST00000527897 NMNAT1Q9HAN9 279 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-213ENST00000527897 TAGLN3Q9UI15 199 aa13.42□□□□□ -0.26
CAPN1-213ENST00000527897 FBXL3Q9UKT7 428 aa13.42□□□□□ -0.26
CAPN1-213ENST00000527897 SAMD4AQ9UPU9 718 aaKnown RBP13.42□□□□□ -0.26
CAPN1-213ENST00000527897 ABCA1O95477 2261 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 HTR3EA5X5Y0 456 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 PRSS23O95084 383 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 SERPINA5P05154 406 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 H1F0P07305 194 aaKnown RBP13.41□□□□□ -0.26
CAPN1-213ENST00000527897 CSF3P09919 207 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 TSPAN19P0C672 248 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 ZNF35P13682 527 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 PDLIM4P50479 330 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 HSF2Q03933 536 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 PLP2Q04941 152 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 KRTAP1-1Q07627 177 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 KRT72Q14CN4 511 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 PODNL1Q6PEZ8 512 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 ZNF584Q8IVC4 421 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 RNF113BQ8IZP6 322 aaKnown RBP13.41□□□□□ -0.26
CAPN1-213ENST00000527897 ICA1LQ8NDH6 482 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 SLC30A7Q8NEW0 376 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 OR52J3Q8NH60 311 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 C10orf105Q8TEF2 133 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 FAM46AQ96IP4 442 aaKnown RBP13.41□□□□□ -0.26
CAPN1-213ENST00000527897 TSPAN32Q96QS1 320 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 RBP7Q96R05 134 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 CDRT15Q96T59 188 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 SYT3Q9BQG1 590 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 RAB1BQ9H0U4 201 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 TPK1Q9H3S4 243 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 CDH20Q9HBT6 801 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 CCNB1IP1Q9NPC3 277 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 YAE1D1Q9NRH1 226 aa13.41□□□□□ -0.26
CAPN1-213ENST00000527897 DCAF13Q9NV06 445 aaKnown RBP13.41□□□□□ -0.26
CAPN1-213ENST00000527897 IGKV1D-43A0A0B4J1Z2 117 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 CENPBD1B2RD01 187 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 H7C1C5 153 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 CDC42EP2O14613 210 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 ERCC1P07992 297 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-213ENST00000527897 ADRA2AP08913 450 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 FAM157BP0CG42 384 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 NR2C1P13056 603 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 SLC25A16P16260 332 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 SLC9A3P48764 834 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 PPOXP50336 477 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 LCN6P62502 163 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 ERVK-25P63136 954 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 VLDLRP98155 873 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 GGTLC2Q14390 218 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 TAF11Q15544 211 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 SAMD4BQ5PRF9 694 aaKnown RBP13.4□□□□□ -0.26
CAPN1-213ENST00000527897 C10orf128Q5T292 105 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 TSEN54Q7Z6J9 526 aaKnown RBP13.4□□□□□ -0.26
CAPN1-213ENST00000527897 PIGWQ7Z7B1 504 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 PGAM4Q8N0Y7 254 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 SLC7A13Q8TCU3 470 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 SEPHS2Q99611 448 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 DOK1Q99704 481 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 PIMREGQ9BSJ6 248 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 MRPL37Q9BZE1 423 aaKnown RBP13.4□□□□□ -0.26
CAPN1-213ENST00000527897 NDUFAF4Q9P032 175 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 DUSP13Q9UII6 198 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 MAGEL2Q9UJ55 1249 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 TMEM5Q9Y2B1 443 aa13.4□□□□□ -0.26
CAPN1-213ENST00000527897 IQCMA0A1B0GVH7 501 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 A0A1W2PPL8 197 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 TMEM129A0AVI4 362 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 A6NIZ1 184 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 NPIPB13A6NJU9 1138 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 NPIPB4C9JG80 1138 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 RHCEP18577 417 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 CCNOP22674 350 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 GUCA1AP43080 201 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-213ENST00000527897 RAP1BP61224 184 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 RPS23P62266 143 aaKnown RBP13.39□□□□□ -0.27
CAPN1-213ENST00000527897 RAP1AP62834 184 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 MSMPQ1L6U9 139 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 TBC1D28Q2M2D7 210 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 ZBED5Q49AG3 693 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms