RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 CD97P48960 835 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 RORCP51449 518 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 RAC3P60763 192 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 GLO1Q04760 184 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 SRSF6Q13247 344 aaKnown RBP12.53□□□□□ -0.4
CLK3-204ENST00000483723 MFAP5Q13361 173 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 TOMM20Q15388 145 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 HSPB2Q16082 182 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 HIST3H3Q16695 136 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 HYAL4Q2M3T9 481 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 THEM4Q5T1C6 240 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 AGAP7PQ5VUJ5 663 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 SLC25A25Q6KCM7 469 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 RPTNQ6XPR3 784 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 GGNQ86UU5 652 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 TEX19Q8NA77 164 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 SYT14Q8NB59 555 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 SLC26A10Q8NG04 563 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 SLC25A46Q96AG3 418 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 SMIM19Q96E16 107 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 AGAP4Q96P64 663 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 RBP7Q96R05 134 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 EMC6Q9BV81 110 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 TTTY10Q9BZA0 68 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 LAMP5Q9UJQ1 280 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 GNG8Q9UK08 70 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 NME2P1O60361 137 aa12.52□□□□□ -0.41
CLK3-204ENST00000483723 HRGP04196 525 aa12.52□□□□□ -0.41
CLK3-204ENST00000483723 NME2P22392 152 aa12.52□□□□□ -0.41
CLK3-204ENST00000483723 SDC2P34741 201 aa12.52□□□□□ -0.41
CLK3-204ENST00000483723 SLC3A1Q07837 685 aa12.52□□□□□ -0.41
CLK3-204ENST00000483723 ZNF846Q147U1 533 aa12.52□□□□□ -0.41
CLK3-204ENST00000483723 WIPI1Q5MNZ9 446 aaPredicted RBP12.52□□□□□ -0.41
CLK3-204ENST00000483723 SLC25A47Q6Q0C1 308 aa12.52□□□□□ -0.41
CLK3-204ENST00000483723 UNQ9370/PRO34162Q6UXP9 181 aa12.52□□□□□ -0.41
CLK3-204ENST00000483723 ESPNLQ6ZVH7 1005 aa12.52□□□□□ -0.41
CLK3-204ENST00000483723 MFSD4AQ8N468 514 aa12.52□□□□□ -0.41
CLK3-204ENST00000483723 ZNF454Q8N9F8 522 aa12.52□□□□□ -0.41
CLK3-204ENST00000483723 FNDC8Q8TC99 324 aa12.52□□□□□ -0.41
CLK3-204ENST00000483723 ASB17Q8WXJ9 295 aa12.52□□□□□ -0.41
CLK3-204ENST00000483723 SLC39A7Q92504 469 aa12.52□□□□□ -0.41
CLK3-204ENST00000483723 GHSRQ92847 366 aa12.52□□□□□ -0.41
CLK3-204ENST00000483723 BORCS5Q969J3 196 aa12.52□□□□□ -0.41
CLK3-204ENST00000483723 HES7Q9BYE0 225 aa12.52□□□□□ -0.41
CLK3-204ENST00000483723 ZNF552Q9H707 407 aaPredicted RBP12.52□□□□□ -0.41
CLK3-204ENST00000483723 ZNF703Q9H7S9 590 aaPredicted RBP12.52□□□□□ -0.41
CLK3-204ENST00000483723 ACOXLQ9NUZ1 547 aa12.52□□□□□ -0.41
CLK3-204ENST00000483723 GALNT8Q9NY28 637 aa12.52□□□□□ -0.41
CLK3-204ENST00000483723 WDFY3Q8IZQ1 3526 aa12.52□□□□□ -0.41
CLK3-204ENST00000483723 CD8B2A6NJW9 211 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 TNFSF11O14788 317 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 GPRIN2O60269 458 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 TRAPPC6AO75865 159 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 GLSO94925 669 aaPredicted RBP12.51□□□□□ -0.41
CLK3-204ENST00000483723 IGHG1P01857 330 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 CLEC2LP0C7M8 214 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 CD8BP10966 210 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 BMP4P12644 408 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 GDF1P27539 372 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 CLDN15P56746 228 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 CLDN20P56880 219 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 ROM1Q03395 351 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 FMODQ06828 376 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 INSL4Q14641 139 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 FDX2Q6P4F2 183 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 CREB3L2Q70SY1 520 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 SFXN2Q96NB2 322 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 OR8B4Q96RC9 309 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 SF3B5Q9BWJ5 86 aaKnown RBP12.51□□□□□ -0.41
CLK3-204ENST00000483723 SRXN1Q9BYN0 137 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 KCNN2Q9H2S1 579 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 HMG20AQ9NP66 347 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 SNTG1Q9NSN8 517 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 KCNG2Q9UJ96 466 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 KLF13Q9Y2Y9 288 aaPredicted RBP12.51□□□□□ -0.41
CLK3-204ENST00000483723 PEX16Q9Y5Y5 336 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 RIF1Q5UIP0 2472 aaKnown RBP12.51□□□□□ -0.41
CLK3-204ENST00000483723 FAM186AA6NE01 2351 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 MED12Q93074 2177 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 TRBV2A0A0J9YWF9 115 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 SHISA3A0PJX4 238 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 HLA-DQA2P01906 255 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 KRT8P05787 483 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 OR8G3PP0DMU2 310 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 EDNRAP25101 427 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 PSMB10P40306 273 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 GDI2P50395 445 aaKnown RBP12.51□□□□□ -0.41
CLK3-204ENST00000483723 ZNF133P52736 654 aaPredicted RBP12.51□□□□□ -0.41
CLK3-204ENST00000483723 RPS11P62280 158 aaKnown RBP eCLIP12.51□□□□□ -0.41
CLK3-204ENST00000483723 CLN3Q13286 438 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 SLC17A1Q14916 467 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 LIPNQ5VXI9 398 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 SLC18B1Q6NT16 456 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 TRILQ7L0X0 811 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 GPAT4Q86UL3 456 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 CROCCP3Q8IVE0 287 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 NOXO1Q8NFA2 376 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 NEIL3Q8TAT5 605 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 THEM6Q8WUY1 208 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 SCMH1Q96GD3 660 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms