RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 WIPI1Q5MNZ9 446 aaPredicted RBP13.56□□□□□ -0.24
ACTB-204ENST00000425660 THEM4Q5T1C6 240 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 RPL22L1Q6P5R6 122 aaKnown RBP13.56□□□□□ -0.24
ACTB-204ENST00000425660 RPTNQ6XPR3 784 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 TMEM91Q6ZNR0 172 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 PLEKHG7Q6ZR37 379 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 SLC26A10Q8NG04 563 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 OR6Q1Q8NGQ2 317 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 RNF166Q96A37 237 aaPredicted RBP13.56□□□□□ -0.24
ACTB-204ENST00000425660 ADAD1Q96M93 576 aaKnown RBP13.56□□□□□ -0.24
ACTB-204ENST00000425660 SFXN2Q96NB2 322 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 EMC6Q9BV81 110 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 HDHD5Q9BXW7 423 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 TTTY10Q9BZA0 68 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 LAMP5Q9UJQ1 280 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 GNG8Q9UK08 70 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 HSPB2A8KAH6 182 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 TNFSF11O14788 317 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 TRAPPC6AO75865 159 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 GLSO94925 669 aaPredicted RBP13.55□□□□□ -0.24
ACTB-204ENST00000425660 GPANK1O95872 356 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 IGHG1P01857 330 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 HRGP04196 525 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 PRKAR1AP10644 381 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 PSKH1P11801 424 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 SOX6P35712 828 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 CD97P48960 835 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 ENTPD1P49961 510 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 FMODQ06828 376 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 MRPL28Q13084 256 aaKnown RBP13.55□□□□□ -0.24
ACTB-204ENST00000425660 HSPB2Q16082 182 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 ZNF829Q3KNS6 432 aaPredicted RBP13.55□□□□□ -0.24
ACTB-204ENST00000425660 SLC25A25Q6KCM7 469 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 MS4A15Q8N5U1 240 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 NOXO1Q8NFA2 376 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 MCFD2Q8NI22 146 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 FNDC8Q8TC99 324 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 SLC25A46Q96AG3 418 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 NAA11Q9BSU3 229 aaPredicted RBP13.55□□□□□ -0.24
ACTB-204ENST00000425660 TTTY12Q9BZ98 90 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 KCNN2Q9H2S1 579 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 KLHL9Q9P2J3 617 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 MRM2Q9UI43 246 aaKnown RBP13.55□□□□□ -0.24
ACTB-204ENST00000425660 COA3Q9Y2R0 106 aaPredicted RBP13.55□□□□□ -0.24
ACTB-204ENST00000425660 GRIP1Q9Y3R0 1128 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 MED12Q93074 2177 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 IGKV1D-43A0A0B4J1Z2 117 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 SLC35F4A4IF30 521 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 ZNF593O00488 134 aaPredicted RBP13.55□□□□□ -0.24
ACTB-204ENST00000425660 RGS9O75916 674 aaPredicted RBP13.55□□□□□ -0.24
ACTB-204ENST00000425660 HLA-DQA2P01906 255 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 TACSTD2P09758 323 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 OPRL1P41146 370 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 SLC17A1Q14916 467 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 TEX30Q5JUR7 227 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 ARL9Q6T311 187 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 ZFP62Q8NB50 900 aaPredicted RBP13.55□□□□□ -0.24
ACTB-204ENST00000425660 ASB17Q8WXJ9 295 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 GHSRQ92847 366 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 SCMH1Q96GD3 660 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 RBP7Q96R05 134 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 SF3B5Q9BWJ5 86 aaKnown RBP13.55□□□□□ -0.24
ACTB-204ENST00000425660 SRXN1Q9BYN0 137 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 CCDC86Q9H6F5 360 aaKnown RBP13.55□□□□□ -0.24
ACTB-204ENST00000425660 GALNT8Q9NY28 637 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 KCNG2Q9UJ96 466 aa13.55□□□□□ -0.24
ACTB-204ENST00000425660 PIEZO1Q92508 2521 aa13.54□□□□□ -0.24
ACTB-204ENST00000425660 TRABD2BA6NFA1 517 aa13.54□□□□□ -0.24
ACTB-204ENST00000425660 A6NL46 340 aa13.54□□□□□ -0.24
ACTB-204ENST00000425660 H0YC42 278 aa13.54□□□□□ -0.24
ACTB-204ENST00000425660 KLRC4-KLRK1H3BQV0 150 aa13.54□□□□□ -0.24
ACTB-204ENST00000425660 KHDRBS3O75525 346 aaKnown RBP13.54□□□□□ -0.24
ACTB-204ENST00000425660 UPK3AO75631 287 aa13.54□□□□□ -0.24
ACTB-204ENST00000425660 CD46P15529 392 aa13.54□□□□□ -0.24
ACTB-204ENST00000425660 ROM1Q03395 351 aa13.54□□□□□ -0.24
ACTB-204ENST00000425660 DCTN2Q13561 401 aaKnown RBP13.54□□□□□ -0.24
ACTB-204ENST00000425660 INSL4Q14641 139 aa13.54□□□□□ -0.24
ACTB-204ENST00000425660 IGFL2Q6UWQ7 119 aa13.54□□□□□ -0.24
ACTB-204ENST00000425660 CREB3L2Q70SY1 520 aa13.54□□□□□ -0.24
ACTB-204ENST00000425660 GALNTL5Q7Z4T8 443 aa13.54□□□□□ -0.24
ACTB-204ENST00000425660 ZNF454Q8N9F8 522 aa13.54□□□□□ -0.24
ACTB-204ENST00000425660 UCN2Q96RP3 112 aa13.54□□□□□ -0.24
ACTB-204ENST00000425660 BARHL1Q9BZE3 327 aa13.54□□□□□ -0.24
ACTB-204ENST00000425660 AKIP1Q9NQ31 210 aa13.54□□□□□ -0.24
ACTB-204ENST00000425660 NCKAP5O14513 1909 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 SPTBN4Q9H254 2564 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 A0A075B6Q4 140 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 ZNF891A8MT65 544 aaPredicted RBP13.53□□□□□ -0.24
ACTB-204ENST00000425660 SMAD9O15198 467 aaKnown RBP13.53□□□□□ -0.24
ACTB-204ENST00000425660 KRT8P05787 483 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 POU3F2P20265 443 aaPredicted RBP13.53□□□□□ -0.24
ACTB-204ENST00000425660 SDC2P34741 201 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 RPS27P42677 84 aaKnown RBP13.53□□□□□ -0.24
ACTB-204ENST00000425660 RORCP51449 518 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 SUCLG1P53597 346 aaKnown RBP13.53□□□□□ -0.24
ACTB-204ENST00000425660 CLDN15P56746 228 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 ADAM8P78325 824 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 SLC3A1Q07837 685 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 CDC20Q12834 499 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 LIPNQ5VXI9 398 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms