RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 CCDC58Q4VC31 144 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 ZNF684Q5T5D7 378 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 LRRC69Q6ZNQ3 347 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 KCTD20Q7Z5Y7 419 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 CEACAM19Q7Z692 300 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 BTLAQ7Z6A9 289 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 GALNT16Q8N428 558 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 MS4A15Q8N5U1 240 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 OR2M7Q8NG81 312 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 OR13C5Q8NGS8 318 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 CEP19Q96LK0 163 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 SFXN2Q96NB2 322 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 RBP7Q96R05 134 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 NAA11Q9BSU3 229 aaPredicted RBP13.38□□□□□ -0.27
NEK2-201ENST00000366998 HES7Q9BYE0 225 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 KLHL13Q9P2N7 655 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 MRM2Q9UI43 246 aaKnown RBP13.38□□□□□ -0.27
NEK2-201ENST00000366998 ZFHX2Q9C0A1 2572 aaPredicted RBP13.38□□□□□ -0.27
NEK2-201ENST00000366998 IGHV3-15A0A0B4J1V0 119 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 A0A0J9YW62 118 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 CTDSP2O14595 271 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 EIF1BO60739 113 aaKnown RBP13.38□□□□□ -0.27
NEK2-201ENST00000366998 KHDRBS3O75525 346 aaKnown RBP13.38□□□□□ -0.27
NEK2-201ENST00000366998 PRKAR1AP10644 381 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 CALRP27797 417 aaKnown RBP13.38□□□□□ -0.27
NEK2-201ENST00000366998 ZNF239Q16600 458 aaKnown RBP13.38□□□□□ -0.27
NEK2-201ENST00000366998 WIPI1Q5MNZ9 446 aaPredicted RBP13.38□□□□□ -0.27
NEK2-201ENST00000366998 CARD17Q5XLA6 110 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 HDDC2Q7Z4H3 204 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 NOXO1Q8NFA2 376 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 KCNE4Q8WWG9 221 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 NSMAFQ92636 917 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 DTNBP1Q96EV8 351 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 RASD1Q9Y272 281 aa13.38□□□□□ -0.27
NEK2-201ENST00000366998 RIF1Q5UIP0 2472 aaKnown RBP13.37□□□□□ -0.27
NEK2-201ENST00000366998 CACNA1CQ13936 2221 aa13.37□□□□□ -0.27
NEK2-201ENST00000366998 IGKV1D-43A0A0B4J1Z2 117 aa13.37□□□□□ -0.27
NEK2-201ENST00000366998 SHISA3A0PJX4 238 aa13.37□□□□□ -0.27
NEK2-201ENST00000366998 CENPBD1B2RD01 187 aa13.37□□□□□ -0.27
NEK2-201ENST00000366998 MPZL1O95297 269 aa13.37□□□□□ -0.27
NEK2-201ENST00000366998 SERPINA3P01011 423 aa13.37□□□□□ -0.27
NEK2-201ENST00000366998 IGHG1P01857 330 aa13.37□□□□□ -0.27
NEK2-201ENST00000366998 GAAP10253 952 aa13.37□□□□□ -0.27
NEK2-201ENST00000366998 ZNF823P16415 610 aa13.37□□□□□ -0.27
NEK2-201ENST00000366998 CD97P48960 835 aa13.37□□□□□ -0.27
NEK2-201ENST00000366998 EGR3Q06889 387 aa13.37□□□□□ -0.27
NEK2-201ENST00000366998 ACSM3Q53FZ2 586 aa13.37□□□□□ -0.27
NEK2-201ENST00000366998 FAM27D1Q5T7N8 215 aa13.37□□□□□ -0.27
NEK2-201ENST00000366998 LIPNQ5VXI9 398 aa13.37□□□□□ -0.27
NEK2-201ENST00000366998 SLC18B1Q6NT16 456 aa13.37□□□□□ -0.27
NEK2-201ENST00000366998 NHLRC1Q6VVB1 395 aa13.37□□□□□ -0.27
NEK2-201ENST00000366998 AMELYQ99218 206 aa13.37□□□□□ -0.27
NEK2-201ENST00000366998 PDCD1LG2Q9BQ51 273 aa13.37□□□□□ -0.27
NEK2-201ENST00000366998 TTYH2Q9BSA4 534 aa13.37□□□□□ -0.27
NEK2-201ENST00000366998 PALMDQ9NP74 551 aa13.37□□□□□ -0.27
NEK2-201ENST00000366998 IQCMA0A1B0GVH7 501 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 ZNF726A6NNF4 738 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 EIF1AYO14602 144 aaKnown RBP13.36□□□□□ -0.27
NEK2-201ENST00000366998 SULT1C4O75897 302 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 NCR1O76036 304 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 ABHD16AO95870 558 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 MYL9P24844 172 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 RFC3P40938 356 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 RRADP55042 308 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 FOXO1Q12778 655 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 SRSF6Q13247 344 aaKnown RBP13.36□□□□□ -0.27
NEK2-201ENST00000366998 EIF2B1Q14232 305 aaKnown RBP13.36□□□□□ -0.27
NEK2-201ENST00000366998 UBQLNLQ8IYU4 475 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 SLC26A10Q8NG04 563 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 ASB17Q8WXJ9 295 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 SLC25A44Q96H78 314 aaPredicted RBP13.36□□□□□ -0.27
NEK2-201ENST00000366998 UCN2Q96RP3 112 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 SMAD5Q99717 465 aaKnown RBP13.36□□□□□ -0.27
NEK2-201ENST00000366998 OR2B2Q9GZK3 357 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 OCEL1Q9H607 264 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 SLCO1C1Q9NYB5 712 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 B4GALT7Q9UBV7 327 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 PLEKHB1Q9UF11 243 aaPredicted RBP13.36□□□□□ -0.27
NEK2-201ENST00000366998 A0A1B0GVG6 124 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 H0YC42 278 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 TM4SF5O14894 197 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 GPRIN2O60269 458 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 UPK3AO75631 287 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 PGA4P0DJD7 388 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 PGA3P0DJD8 388 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 PTGS2P35354 604 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 MTNR1BP49286 362 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 CLDN17P56750 224 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 CLDN20P56880 219 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 NANOS3P60323 173 aaKnown RBP13.36□□□□□ -0.27
NEK2-201ENST00000366998 MRPL28Q13084 256 aaKnown RBP13.36□□□□□ -0.27
NEK2-201ENST00000366998 SPANXN2Q5MJ10 180 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 THEM4Q5T1C6 240 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 AGAP7PQ5VUJ5 663 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 LRRN1Q6UXK5 716 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 SPATC1Q76KD6 591 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 ASCL5Q7RTU5 278 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 TMPRSS7Q7RTY8 843 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 SULF2Q8IWU5 870 aa13.36□□□□□ -0.27
NEK2-201ENST00000366998 OR6X1Q8NH79 312 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms