RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 FBXL3Q9UKT7 428 aa19.84■□□□□ 0.77
SNF8-209ENST00000510558 CMAHPQ9Y471 501 aa19.84■□□□□ 0.77
SNF8-209ENST00000510558 NME4O00746 187 aa19.83■□□□□ 0.77
SNF8-209ENST00000510558 PIP5K1CO60331 668 aa19.83■□□□□ 0.77
SNF8-209ENST00000510558 TSPAN19P0C672 248 aa19.83■□□□□ 0.77
SNF8-209ENST00000510558 USF1P22415 310 aaPredicted RBP19.83■□□□□ 0.77
SNF8-209ENST00000510558 IFNA8P32881 189 aa19.83■□□□□ 0.77
SNF8-209ENST00000510558 DAP3P51398 398 aaKnown RBP19.83■□□□□ 0.77
SNF8-209ENST00000510558 VLDLRP98155 873 aa19.83■□□□□ 0.77
SNF8-209ENST00000510558 RAB39AQ14964 217 aa19.83■□□□□ 0.77
SNF8-209ENST00000510558 CARTPTQ16568 116 aa19.83■□□□□ 0.77
SNF8-209ENST00000510558 HIST3H3Q16695 136 aa19.83■□□□□ 0.77
SNF8-209ENST00000510558 C8orf82Q6P1X6 216 aaPredicted RBP19.83■□□□□ 0.77
SNF8-209ENST00000510558 HDDC2Q7Z4H3 204 aa19.83■□□□□ 0.77
SNF8-209ENST00000510558 VTCN1Q7Z7D3 282 aa19.83■□□□□ 0.77
SNF8-209ENST00000510558 TREML1Q86YW5 311 aa19.83■□□□□ 0.77
SNF8-209ENST00000510558 MOSPD2Q8NHP6 518 aa19.83■□□□□ 0.77
SNF8-209ENST00000510558 MCHR2Q969V1 340 aa19.83■□□□□ 0.77
SNF8-209ENST00000510558 HOPXQ9BPY8 73 aaPredicted RBP19.83■□□□□ 0.77
SNF8-209ENST00000510558 PIMREGQ9BSJ6 248 aa19.83■□□□□ 0.77
SNF8-209ENST00000510558 MRPL13Q9BYD1 178 aaKnown RBP19.83■□□□□ 0.77
SNF8-209ENST00000510558 EFCAB1Q9HAE3 211 aa19.83■□□□□ 0.77
SNF8-209ENST00000510558 MYOZ1Q9NP98 299 aaPredicted RBP19.83■□□□□ 0.77
SNF8-209ENST00000510558 SPEF1Q9Y4P9 236 aa19.83■□□□□ 0.77
SNF8-209ENST00000510558 SH3PXD2BA1X283 911 aa19.82■□□□□ 0.76
SNF8-209ENST00000510558 A8MV72 311 aaPredicted RBP19.82■□□□□ 0.76
SNF8-209ENST00000510558 KIAA1324LA8MWY0 1029 aaPredicted RBP19.82■□□□□ 0.76
SNF8-209ENST00000510558 VWC2LB2RUY7 222 aa19.82■□□□□ 0.76
SNF8-209ENST00000510558 NDUFS8O00217 210 aa19.82■□□□□ 0.76
SNF8-209ENST00000510558 CXCR6O00574 342 aa19.82■□□□□ 0.76
SNF8-209ENST00000510558 TRMUO75648 421 aaKnown RBP19.82■□□□□ 0.76
SNF8-209ENST00000510558 FARS2O95363 451 aaKnown RBP19.82■□□□□ 0.76
SNF8-209ENST00000510558 YAP1P46937 504 aaKnown RBP19.82■□□□□ 0.76
SNF8-209ENST00000510558 MYBPC1Q00872 1141 aa19.82■□□□□ 0.76
SNF8-209ENST00000510558 C6orf52Q5T4I8 152 aa19.82■□□□□ 0.76
SNF8-209ENST00000510558 CDK20Q8IZL9 346 aa19.82■□□□□ 0.76
SNF8-209ENST00000510558 SYT14Q8NB59 555 aa19.82■□□□□ 0.76
SNF8-209ENST00000510558 SEPHS2Q99611 448 aa19.82■□□□□ 0.76
SNF8-209ENST00000510558 SH3GL3Q99963 347 aa19.82■□□□□ 0.76
SNF8-209ENST00000510558 DYNLRB1Q9NP97 96 aa19.82■□□□□ 0.76
SNF8-209ENST00000510558 RTTNQ86VV8 2226 aa19.82■□□□□ 0.76
SNF8-209ENST00000510558 LOC390937A0A1W2PQ73 354 aa19.81■□□□□ 0.76
SNF8-209ENST00000510558 CENPBD1B2RD01 187 aa19.81■□□□□ 0.76
SNF8-209ENST00000510558 GSTA4O15217 222 aa19.81■□□□□ 0.76
SNF8-209ENST00000510558 ZNF682O95780 498 aa19.81■□□□□ 0.76
SNF8-209ENST00000510558 IFNW1P05000 195 aa19.81■□□□□ 0.76
SNF8-209ENST00000510558 SERPINA5P05154 406 aa19.81■□□□□ 0.76
SNF8-209ENST00000510558 IFI30P13284 250 aa19.81■□□□□ 0.76
SNF8-209ENST00000510558 ACADSP16219 412 aa19.81■□□□□ 0.76
SNF8-209ENST00000510558 NR4A2P43354 598 aa19.81■□□□□ 0.76
SNF8-209ENST00000510558 NUDT2P50583 147 aa19.81■□□□□ 0.76
SNF8-209ENST00000510558 ZNF84P51523 738 aa19.81■□□□□ 0.76
SNF8-209ENST00000510558 LSM11P83369 360 aaKnown RBP eCLIP19.81■□□□□ 0.76
SNF8-209ENST00000510558 LAPTM4AQ15012 233 aa19.81■□□□□ 0.76
SNF8-209ENST00000510558 MSMPQ1L6U9 139 aa19.81■□□□□ 0.76
SNF8-209ENST00000510558 ZNF584Q8IVC4 421 aa19.81■□□□□ 0.76
SNF8-209ENST00000510558 OFCC1Q8IZS5 231 aa19.81■□□□□ 0.76
SNF8-209ENST00000510558 ZCCHC24Q8N2G6 241 aaKnown RBP19.81■□□□□ 0.76
SNF8-209ENST00000510558 OR4K5Q8NGD3 323 aa19.81■□□□□ 0.76
SNF8-209ENST00000510558 GEMIN6Q8WXD5 167 aaKnown RBP19.81■□□□□ 0.76
SNF8-209ENST00000510558 MRPL24Q96A35 216 aaKnown RBP19.81■□□□□ 0.76
SNF8-209ENST00000510558 SNX13Q9Y5W8 968 aa19.81■□□□□ 0.76
SNF8-209ENST00000510558 NPIPB13A6NJU9 1138 aa19.8■□□□□ 0.76
SNF8-209ENST00000510558 NPIPB4C9JG80 1138 aa19.8■□□□□ 0.76
SNF8-209ENST00000510558 J3KTA2 159 aa19.8■□□□□ 0.76
SNF8-209ENST00000510558 ATP8B1O43520 1251 aa19.8■□□□□ 0.76
SNF8-209ENST00000510558 ERCC1P07992 297 aaPredicted RBP19.8■□□□□ 0.76
SNF8-209ENST00000510558 IGFBP1P08833 259 aaPredicted RBP19.8■□□□□ 0.76
SNF8-209ENST00000510558 FUT4P22083 530 aa19.8■□□□□ 0.76
SNF8-209ENST00000510558 GLRXP35754 106 aa19.8■□□□□ 0.76
SNF8-209ENST00000510558 GSK3BP49841 420 aa19.8■□□□□ 0.76
SNF8-209ENST00000510558 GALK2Q01415 458 aa19.8■□□□□ 0.76
SNF8-209ENST00000510558 GGTLC2Q14390 218 aa19.8■□□□□ 0.76
SNF8-209ENST00000510558 NRN1LQ496H8 165 aa19.8■□□□□ 0.76
SNF8-209ENST00000510558 ARMC4Q5T2S8 1044 aa19.8■□□□□ 0.76
SNF8-209ENST00000510558 GKAP1Q5VSY0 366 aaPredicted RBP19.8■□□□□ 0.76
SNF8-209ENST00000510558 HACD2Q6Y1H2 254 aa19.8■□□□□ 0.76
SNF8-209ENST00000510558 NEU4Q8WWR8 484 aaPredicted RBP19.8■□□□□ 0.76
SNF8-209ENST00000510558 BPIFA2Q96DR5 249 aa19.8■□□□□ 0.76
SNF8-209ENST00000510558 FOXN4Q96NZ1 517 aa19.8■□□□□ 0.76
SNF8-209ENST00000510558 ELAC2Q9BQ52 826 aaKnown RBP19.8■□□□□ 0.76
SNF8-209ENST00000510558 FNDC11Q9BVV2 318 aa19.8■□□□□ 0.76
SNF8-209ENST00000510558 MRPL37Q9BZE1 423 aaKnown RBP19.8■□□□□ 0.76
SNF8-209ENST00000510558 MAN2C1Q9NTJ4 1040 aa19.8■□□□□ 0.76
SNF8-209ENST00000510558 STX18Q9P2W9 335 aaKnown RBP19.8■□□□□ 0.76
SNF8-209ENST00000510558 RHCGQ9UBD6 479 aa19.8■□□□□ 0.76
SNF8-209ENST00000510558 HIF3AQ9Y2N7 669 aa19.8■□□□□ 0.76
SNF8-209ENST00000510558 HTR3EA5X5Y0 456 aa19.79■□□□□ 0.76
SNF8-209ENST00000510558 IGHV4-31P0DP07 118 aa19.79■□□□□ 0.76
SNF8-209ENST00000510558 LSP1P33241 339 aa19.79■□□□□ 0.76
SNF8-209ENST00000510558 EVX1P49640 407 aa19.79■□□□□ 0.76
SNF8-209ENST00000510558 ZNF133P52736 654 aaPredicted RBP19.79■□□□□ 0.76
SNF8-209ENST00000510558 RPS23P62266 143 aaKnown RBP19.79■□□□□ 0.76
SNF8-209ENST00000510558 TRAM2Q15035 370 aa19.79■□□□□ 0.76
SNF8-209ENST00000510558 FXNQ16595 210 aa19.79■□□□□ 0.76
SNF8-209ENST00000510558 IFI44LQ53G44 452 aa19.79■□□□□ 0.76
SNF8-209ENST00000510558 ALG10Q5BKT4 473 aa19.79■□□□□ 0.76
SNF8-209ENST00000510558 TMEM53Q6P2H8 277 aa19.79■□□□□ 0.76
SNF8-209ENST00000510558 CBLL1Q75N03 491 aa19.79■□□□□ 0.76
SNF8-209ENST00000510558 SLC16A14Q7RTX9 510 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms