RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 MRPL28Q13084 256 aaKnown RBP6.06□□□□□ -1.44
MSH5-217ENST00000494458 SLC17A1Q14916 467 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 TRAM1Q15629 374 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 MOGQ16653 247 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 THEM4Q5T1C6 240 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 AGAP7PQ5VUJ5 663 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 LIPKQ5VXJ0 399 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 POMZP3Q6PJE2 187 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 SLC25A47Q6Q0C1 308 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 IGFL3Q6UXB1 125 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 FOXL2NBQ6ZUU3 175 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 ESPNLQ6ZVH7 1005 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 SLC35F2Q8IXU6 374 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 PM20D2Q8IYS1 436 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 MS4A15Q8N5U1 240 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 ZIC4Q8N9L1 334 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 ZNF511Q8NB15 262 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 OR5M1Q8NGP8 315 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 OTOSQ8NHW6 89 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 FNDC8Q8TC99 324 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 PHYHIPQ92561 330 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 UFD1Q92890 307 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 PELI1Q96FA3 418 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 SLC25A44Q96H78 314 aaPredicted RBP6.06□□□□□ -1.44
MSH5-217ENST00000494458 TXNDC15Q96J42 360 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 MAP6Q96JE9 813 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 ADAD1Q96M93 576 aaKnown RBP6.06□□□□□ -1.44
MSH5-217ENST00000494458 KLHL15Q96M94 604 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 AGAP4Q96P64 663 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 SMAD5Q99717 465 aaKnown RBP6.06□□□□□ -1.44
MSH5-217ENST00000494458 DCSTAMPQ9H295 470 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 SYT4Q9H2B2 425 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 ZCCHC4Q9H5U6 513 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 SRA1Q9HD15 236 aaKnown RBP6.06□□□□□ -1.44
MSH5-217ENST00000494458 TXNL4BQ9NX01 149 aaKnown RBP6.06□□□□□ -1.44
MSH5-217ENST00000494458 ING1Q9UK53 422 aaPredicted RBP6.06□□□□□ -1.44
MSH5-217ENST00000494458 BOKQ9UMX3 212 aaPredicted RBP6.06□□□□□ -1.44
MSH5-217ENST00000494458 POLHQ9Y253 713 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 CEP250Q9BV73 2442 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 IGKV3D-15A0A087WSY6 115 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 IGKV1D-43A0A0B4J1Z2 117 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 SLC35F4A4IF30 521 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 TRABD2BA6NFA1 517 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 METTL15A6NJ78 407 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 ZNF716A6NP11 495 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 E9PI62 339 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 C11orf98E9PRG8 122 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 KLRC4-KLRK1H3BQV0 150 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 XKRYO14609 159 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 PHYHO14832 338 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 SELENOFO60613 162 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 NOL3O60936 208 aaKnown RBP6.05□□□□□ -1.44
MSH5-217ENST00000494458 SRSF10O75494 262 aaKnown RBP6.05□□□□□ -1.44
MSH5-217ENST00000494458 HLA-DPB1P04440 258 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 HSMCR30P0CW71 290 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 TFPIP10646 304 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 CD37P11049 281 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 PSKH1P11801 424 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 SDHBP21912 280 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 NR4A1P22736 598 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 AHCYP23526 432 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 ITGA3P26006 1051 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 DCTDP32321 178 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 PYCR1P32322 319 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 ATP6V1E1P36543 226 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 TGFBR1P36897 503 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 RPS19P39019 145 aaKnown RBP6.05□□□□□ -1.44
MSH5-217ENST00000494458 CASRP41180 1078 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 ETV6P41212 452 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 CD97P48960 835 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 LHX2P50458 406 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 TNFSF10P50591 281 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 HCCSP53701 268 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 CLDN18P56856 261 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 RPS11P62280 158 aaKnown RBP eCLIP6.05□□□□□ -1.44
MSH5-217ENST00000494458 RPS25P62851 125 aaKnown RBP6.05□□□□□ -1.44
MSH5-217ENST00000494458 FABP5Q01469 135 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 ROR2Q01974 943 aaKnown RBP6.05□□□□□ -1.44
MSH5-217ENST00000494458 SRSF6Q13247 344 aaKnown RBP6.05□□□□□ -1.44
MSH5-217ENST00000494458 DGUOKQ16854 277 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 SOWAHCQ53LP3 525 aaPredicted RBP6.05□□□□□ -1.44
MSH5-217ENST00000494458 C10orf128Q5T292 105 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 ATP1A1-AS1Q5TC04 95 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 ABLIM2Q6H8Q1 611 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 RPL22L1Q6P5R6 122 aaKnown RBP6.05□□□□□ -1.44
MSH5-217ENST00000494458 LRFN4Q6PJG9 635 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 DEGS2Q6QHC5 323 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 LYPD4Q6UWN0 246 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 PLEKHG7Q6ZR37 379 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 CREB3L2Q70SY1 520 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 HDDC2Q7Z4H3 204 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 KLBQ86Z14 1044 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 UEVLDQ8IX04 471 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 TMEM123Q8N131 208 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 KDM8Q8N371 416 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 RFLNBQ8N5W9 214 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 KBTBD8Q8NFY9 601 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 SLC26A10Q8NG04 563 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 OR10H4Q8NGA5 316 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 OR51L1Q8NGJ5 315 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms