RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 NIPAL3Q6P499 406 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 BHLHA9Q7RTU4 235 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 CPEB2Q7Z5Q1 589 aaKnown RBP9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 TPRA1Q86W33 373 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 LACC1Q8IV20 430 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 FAM109AQ8N4B1 249 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 OR2A1Q8NGT9 310 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 OR14K1Q8NGZ2 314 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 UCN3Q969E3 161 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 FAM3DQ96BQ1 224 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 DERL3Q96Q80 235 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 CSF3RQ99062 836 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 PRRT1Q99946 306 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 ARHGAP9Q9BRR9 750 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 RPP25Q9BUL9 199 aaKnown RBP9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 A4GALTQ9NPC4 353 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 ZNF223Q9UK11 482 aaPredicted RBP9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 SLC22A13Q9Y226 551 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 PUS1Q9Y606 427 aaKnown RBP eCLIP9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 TMEM235A6NFC5 223 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 NAP1L6A6NFF2 107 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 FZD6O60353 706 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 PRAF2O60831 178 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 RPL19P84098 196 aaKnown RBP9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 AFMIDQ63HM1 303 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 ANGPTL5Q86XS5 388 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 LIX1LQ8IVB5 337 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 RNF113BQ8IZP6 322 aaKnown RBP9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 ANKRD53Q8N9V6 530 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 LCORQ96JN0 433 aaPredicted RBP9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 CNTNAP3BQ96NU0 1288 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 C1QTNF6Q9BXI9 259 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 C1orf198Q9H425 327 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 KIR3DX1Q9H7L2 352 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 CDH20Q9HBT6 801 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 MED29Q9NX70 200 aa9.74□□□□□ -0.85
SEMA4D-208ENST00000422704 PLCE1Q9P212 2302 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 PKDREJQ9NTG1 2253 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 TRDV1A0A1B0GX56 115 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 M0R082 166 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 SDCBPO00560 298 aaPredicted RBP9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 IGHA2P01877 340 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 C1QAP02745 245 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 ATP1B1P05026 303 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 CYCSP99999 105 aaKnown RBP9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 PHLDA2Q53GA4 152 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 ZNF595Q8IYB9 648 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 ZNF566Q969W8 418 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 MRPL38Q96DV4 380 aaKnown RBP9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 RAB3CQ96E17 227 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 MYADMQ96S97 322 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 A6NIZ1 184 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 C1orf196B1AJZ1 125 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 ZNF749O43361 778 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 MED6O75586 246 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 ACTL6BO94805 426 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 GUSBP08236 651 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 CD1CP29017 333 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 GFERP55789 205 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 RAP1BP61224 184 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 RAP2BP61225 183 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 RAP1AP62834 184 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 RBMS2Q15434 407 aaKnown RBP9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 TMEM81Q6P7N7 255 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 ADAMTSL4Q6UY14 1074 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 SLC16A14Q7RTX9 510 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 CMTM1Q8IZ96 169 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 ADGRF3Q8IZF5 1079 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 ST7LQ8TDW4 575 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 TCEAL2Q9H3H9 227 aaPredicted RBP9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 SERGEFQ9UGK8 458 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 TMEFF2Q9UIK5 374 aaPredicted RBP9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 ZAR1LA6NP61 321 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 RAB27BO00194 218 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 RAB40ALP0C0E4 278 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 SLC35E2P0CK97 266 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 POU3F2P20265 443 aaPredicted RBP9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 CTGFP29279 349 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 ZNF77Q15935 545 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 ADAMTS18Q8TE60 1221 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 RAB40AQ8WXH6 277 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 SLC25A46Q96AG3 418 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 RSPRY1Q96DX4 576 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 OPALINQ96PE5 141 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 FAM234AQ9H0X4 552 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 EMC7Q9NPA0 242 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 KCNIP1Q9NZI2 227 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 DNAJB11Q9UBS4 358 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 GPR55Q9Y2T6 319 aaPredicted RBP9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 NOTCH2Q04721 2471 aa9.73□□□□□ -0.85
SEMA4D-208ENST00000422704 SYT5O00445 386 aa9.72□□□□□ -0.85
SEMA4D-208ENST00000422704 CTNSO60931 367 aa9.72□□□□□ -0.85
SEMA4D-208ENST00000422704 ALKBH1Q13686 389 aaKnown RBP9.72□□□□□ -0.85
SEMA4D-208ENST00000422704 PRTGQ2VWP7 1150 aa9.72□□□□□ -0.85
SEMA4D-208ENST00000422704 PXDC1Q5TGL8 231 aa9.72□□□□□ -0.85
SEMA4D-208ENST00000422704 LYSMD4Q5XG99 296 aa9.72□□□□□ -0.85
SEMA4D-208ENST00000422704 ZNF620Q6ZNG0 422 aa9.72□□□□□ -0.85
SEMA4D-208ENST00000422704 VASH1Q7L8A9 365 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms