RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 ZNF627Q7L945 461 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 ZNF501Q96CX3 271 aaPredicted RBP8.24□□□□□ -1.09
CKAP2-201ENST00000258607 TMCO6Q96DC7 493 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 RNF32Q9H0A6 362 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 ZNF223Q9UK11 482 aaPredicted RBP8.24□□□□□ -1.09
CKAP2-201ENST00000258607 NPIPA1Q9UND3 350 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 EMC9Q9Y3B6 208 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 SMG1Q96Q15 3661 aaKnown RBP8.24□□□□□ -1.09
CKAP2-201ENST00000258607 NCOA6Q14686 2063 aaPredicted RBP8.24□□□□□ -1.09
CKAP2-201ENST00000258607 A0A087WV62 115 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 LOC101059948A0A1B0GTJ6 334 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 MEX3AA1L020 520 aaKnown RBP8.24□□□□□ -1.09
CKAP2-201ENST00000258607 OR6C70A6NIJ9 312 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 NUDT21O43809 227 aaKnown RBP8.24□□□□□ -1.09
CKAP2-201ENST00000258607 THBS1P07996 1170 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 CSF3P09919 207 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 BIDP55957 195 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 SERTAD2Q14140 314 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 ELAVL1Q15717 326 aaKnown RBP8.24□□□□□ -1.09
CKAP2-201ENST00000258607 WBP2NLQ6ICG8 309 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 ARHGAP11AQ6P4F7 1023 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 VASH1Q7L8A9 365 aaPredicted RBP8.24□□□□□ -1.09
CKAP2-201ENST00000258607 CHST4Q8NCG5 386 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 ZNF721Q8TF20 911 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 SLC25A46Q96AG3 418 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 FAM71F1Q96KD3 344 aaPredicted RBP8.24□□□□□ -1.09
CKAP2-201ENST00000258607 FUZQ9BT04 418 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 MMP25Q9NPA2 562 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 FKBP14Q9NWM8 211 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 PLA2G3Q9NZ20 509 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 B9D1Q9UPM9 204 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 KLK4Q9Y5K2 254 aa8.24□□□□□ -1.09
CKAP2-201ENST00000258607 A0A087WUJ7 227 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 F5H5K5 113 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 KHDRBS3O75525 346 aaKnown RBP8.23□□□□□ -1.09
CKAP2-201ENST00000258607 GIMD1P0DJR0 217 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 HOXB6P17509 224 aaKnown RBP8.23□□□□□ -1.09
CKAP2-201ENST00000258607 RAB3BP20337 219 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 EPHA8P29322 1005 aaPredicted RBP8.23□□□□□ -1.09
CKAP2-201ENST00000258607 GABRA5P31644 462 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 RBMXP38159 391 aaKnown RBP8.23□□□□□ -1.09
CKAP2-201ENST00000258607 DCDP81605 110 aaKnown RBP8.23□□□□□ -1.09
CKAP2-201ENST00000258607 PRKCDQ05655 676 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 C3AR1Q16581 482 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 HSD17B12Q53GQ0 312 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 GID4Q8IVV7 300 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 OR51D1Q8NGF3 324 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 TSPAN32Q96QS1 320 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 NDEL1Q9GZM8 345 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 ERVMER34-1Q9H9K5 563 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 SLC39A1Q9NY26 324 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 SLCO1C1Q9NYB5 712 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 KLK11Q9UBX7 282 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 FARSAQ9Y285 508 aaKnown RBP8.23□□□□□ -1.09
CKAP2-201ENST00000258607 ITGA10O75578 1167 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 RGS9O75916 674 aaPredicted RBP8.23□□□□□ -1.09
CKAP2-201ENST00000258607 RENP00797 406 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 CPEP16870 476 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 ATF1P18846 271 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 PPICP45877 212 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 AP2S1P53680 142 aaPredicted RBP8.23□□□□□ -1.09
CKAP2-201ENST00000258607 PSMD4P55036 377 aaKnown RBP8.23□□□□□ -1.09
CKAP2-201ENST00000258607 SIRPAP78324 504 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 NKPD1Q17RQ9 610 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 MESTQ5EB52 335 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 SFXN4Q6P4A7 337 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 RAB43Q86YS6 212 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 DRAXINQ8NBI3 349 aaPredicted RBP8.23□□□□□ -1.09
CKAP2-201ENST00000258607 POP5Q969H6 163 aaKnown RBP8.23□□□□□ -1.09
CKAP2-201ENST00000258607 SDHCQ99643 169 aaPredicted RBP8.23□□□□□ -1.09
CKAP2-201ENST00000258607 SARGQ9BW04 601 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 PAQR5Q9NXK6 330 aaPredicted RBP8.23□□□□□ -1.09
CKAP2-201ENST00000258607 WNT16Q9UBV4 365 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 ELF5Q9UKW6 265 aaPredicted RBP8.23□□□□□ -1.09
CKAP2-201ENST00000258607 TBC1D24Q9ULP9 559 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 ZNF337Q9Y3M9 751 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 FKBP7Q9Y680 259 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 ABCA1O95477 2261 aa8.23□□□□□ -1.09
CKAP2-201ENST00000258607 ZNF292O60281 2723 aa8.22□□□□□ -1.09
CKAP2-201ENST00000258607 IGKV1D-43A0A0B4J1Z2 117 aa8.22□□□□□ -1.09
CKAP2-201ENST00000258607 TRABD2BA6NFA1 517 aa8.22□□□□□ -1.09
CKAP2-201ENST00000258607 FLRT2O43155 660 aa8.22□□□□□ -1.09
CKAP2-201ENST00000258607 OR7A10O76100 309 aa8.22□□□□□ -1.09
CKAP2-201ENST00000258607 KDM4BO94953 1096 aa8.22□□□□□ -1.09
CKAP2-201ENST00000258607 GIFP27352 417 aa8.22□□□□□ -1.09
CKAP2-201ENST00000258607 RPS15P62841 145 aaKnown RBP8.22□□□□□ -1.09
CKAP2-201ENST00000258607 GUCA2AQ02747 115 aa8.22□□□□□ -1.09
CKAP2-201ENST00000258607 MFAP5Q13361 173 aa8.22□□□□□ -1.09
CKAP2-201ENST00000258607 EIF2B1Q14232 305 aaKnown RBP8.22□□□□□ -1.09
CKAP2-201ENST00000258607 SF3B4Q15427 424 aaKnown RBP eCLIP8.22□□□□□ -1.093e-7■■□□□ 14.4
CKAP2-201ENST00000258607 SHBQ15464 509 aa8.22□□□□□ -1.09
CKAP2-201ENST00000258607 NR0B2Q15466 257 aa8.22□□□□□ -1.09
CKAP2-201ENST00000258607 ZNF74Q16587 644 aa8.22□□□□□ -1.09
CKAP2-201ENST00000258607 ZNF468Q5VIY5 522 aaPredicted RBP8.22□□□□□ -1.09
CKAP2-201ENST00000258607 NIPAL1Q6NVV3 410 aa8.22□□□□□ -1.09
CKAP2-201ENST00000258607 ZNF613Q6PF04 617 aa8.22□□□□□ -1.09
CKAP2-201ENST00000258607 BRIX1Q8TDN6 353 aaKnown RBP8.22□□□□□ -1.09
CKAP2-201ENST00000258607 CMKLR1Q99788 373 aa8.22□□□□□ -1.09
CKAP2-201ENST00000258607 RBM24Q9BX46 236 aaKnown RBP8.22□□□□□ -1.09
CKAP2-201ENST00000258607 TRPV5Q9NQA5 729 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms