RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 RTL8AQ9BWD3 113 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 FN3KRPQ9HA64 309 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 NOX3Q9HBY0 568 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 TMED7Q9Y3B3 224 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 ARPC4-TTLL3A0A0A6YYG9 625 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 TLCD2A6NGC4 264 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 HCRTR1O43613 425 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 ABLIM3O94929 683 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 HBE1P02100 147 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 LIPCP11150 499 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 MYF6P23409 242 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 BIDP55957 195 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 CEACAM7Q14002 265 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 HYAL4Q2M3T9 481 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 KCTD11Q693B1 232 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 PGAP1Q75T13 922 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 BPIFB2Q8N4F0 458 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 RAB3CQ96E17 227 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 FGF21Q9NSA1 209 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 SERINC4A6NH21 518 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 IMPA2O14732 288 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 UTS2O95399 124 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 GRPP07492 148 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 METTL15P1P0C7V9 234 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 SDC1P18827 310 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 PSMB5P28074 263 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 CTSCP53634 463 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 PRDX1Q06830 199 aaKnown RBP8.28□□□□□ -1.08
CTNND1-208ENST00000428599 GAB1Q13480 694 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 SLC9A3R2Q15599 337 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 FRMD1Q8N878 549 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 KCNG3Q8TAE7 436 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 SLC46A1Q96NT5 459 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 SEMA6CQ9H3T2 930 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 HEYLQ9NQ87 328 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-208ENST00000428599 ACSS1Q9NUB1 689 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-208ENST00000428599 MRPS28Q9Y2Q9 187 aaKnown RBP8.28□□□□□ -1.08
CTNND1-208ENST00000428599 LAMA4Q16363 1823 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-208ENST00000428599 K7EPK0 472 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 ALOX12BO75342 701 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 AIFM1O95831 613 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 SNTB1Q13884 538 aaKnown RBP8.28□□□□□ -1.08
CTNND1-208ENST00000428599 ADGRG5Q8IZF4 528 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 FAM71E2Q8N5Q1 922 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 L3MBTL4Q8NA19 623 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 OR8J2Q8NGG1 315 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 ABHD6Q9BV23 337 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 NTMT1Q9BV86 223 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 C1GALT1Q9NS00 363 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 SLC39A9Q9NUM3 307 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 PROCRQ9UNN8 238 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 ABCD4O14678 606 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 YIF1AO95070 293 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 OPRD1P41143 372 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 PPT1P50897 306 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 GABREP78334 506 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 MC2RQ01718 297 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 GTDC1Q4AE62 458 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 MRPL2Q5T653 305 aaKnown RBP8.28□□□□□ -1.08
CTNND1-208ENST00000428599 HIST2H3PS2Q5TEC6 136 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 OGFOD3Q6PK18 319 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 CLEC14AQ86T13 490 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 CHTF18Q8WVB6 975 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 LIPHQ8WWY8 451 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 GTF2H4Q92759 462 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 EMG1Q92979 244 aaKnown RBP8.28□□□□□ -1.08
CTNND1-208ENST00000428599 BIRC8Q96P09 236 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 OR51J1Q9H342 316 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 ERVMER34-1Q9H9K5 563 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 PRDM9Q9NQV7 894 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 TXNL4BQ9NX01 149 aaKnown RBP8.28□□□□□ -1.08
CTNND1-208ENST00000428599 CAPNS1P04632 268 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 UBBP0CG47 229 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 CD27P26842 260 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 NDUFA6P56556 154 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 RPS27AP62979 156 aaKnown RBP8.28□□□□□ -1.08
CTNND1-208ENST00000428599 UBA52P62987 128 aaKnown RBP8.28□□□□□ -1.08
CTNND1-208ENST00000428599 TMEM31Q5JXX7 168 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 PODNL1Q6PEZ8 512 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 METTL4Q8N3J2 472 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 ENDOVQ8N8Q3 282 aaKnown RBP8.28□□□□□ -1.08
CTNND1-208ENST00000428599 ARRDC2Q8TBH0 407 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 HPSE2Q8WWQ2 592 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 TFAP2CQ92754 450 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 SELENOIQ9C0D9 397 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 P2RY12Q9H244 342 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 BABAM2Q9NXR7 383 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 SDK1Q7Z5N4 2213 aa8.28□□□□□ -1.08
CTNND1-208ENST00000428599 PRAMEF25A6NGN4 478 aa8.27□□□□□ -1.08
CTNND1-208ENST00000428599 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.27□□□□□ -1.08
CTNND1-208ENST00000428599 FJX1Q86VR8 437 aa8.27□□□□□ -1.08
CTNND1-208ENST00000428599 C1orf87Q8N0U7 546 aa8.27□□□□□ -1.08
CTNND1-208ENST00000428599 ELP4Q96EB1 424 aa8.27□□□□□ -1.08
CTNND1-208ENST00000428599 WWTR1Q9GZV5 400 aa8.27□□□□□ -1.08
CTNND1-208ENST00000428599 CD300AQ9UGN4 299 aa8.27□□□□□ -1.08
CTNND1-208ENST00000428599 PUS1Q9Y606 427 aaKnown RBP eCLIP8.27□□□□□ -1.08
CTNND1-208ENST00000428599 SIPA1L3O60292 1781 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-208ENST00000428599 DEGS1O15121 323 aa8.27□□□□□ -1.09
CTNND1-208ENST00000428599 SNAPINO95295 136 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms