RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 H7C1C5 153 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 DCTN6O00399 190 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 SSNA1O43805 119 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 ITGA10O75578 1167 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 HPXP02790 462 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 SULT1A3P0DMM9 295 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 SULT1A4P0DMN0 295 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 PNMTP11086 282 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 SRFP11831 508 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 PRKACBP22694 351 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 MST1P26927 711 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 CCR9P51686 369 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 HSD17B7P56937 341 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 LCN6P62502 163 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 EGR4Q05215 589 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 LTBQ06643 244 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 SLC6A19Q695T7 634 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 APOOLQ6UXV4 268 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 FAM220AQ7Z4H9 259 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 FGD2Q7Z6J4 655 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 CCDC120Q96HB5 630 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 ADAD1Q96M93 576 aaKnown RBP13.09□□□□□ -0.31
HIF3A-202ENST00000244303 ACTR6Q9GZN1 396 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 PLEKHA1Q9HB21 404 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 HRASLSQ9HDD0 168 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 SLC2A4RGQ9NR83 387 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 PRODH2Q9UF12 536 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 MRM2Q9UI43 246 aaKnown RBP13.09□□□□□ -0.31
HIF3A-202ENST00000244303 FLVCR2Q9UPI3 526 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 MEIKINA0A087WXM9 373 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 IGHV1OR15-9A0A0B4J2B8 117 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 C17orf105B2RV13 164 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 CHURC1-FNTBB4DL54 471 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 GABARAPH6UMI1 98 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 UPK3AO75631 287 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 SDHAP31040 664 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 SLC25A1P53007 311 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 LIPNQ5VXI9 398 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 STAC2Q6ZMT1 411 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 ZNF680Q8NEM1 530 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 OR11G2Q8NGC1 345 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 SYNPRQ8TBG9 265 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 LIPHQ8WWY8 451 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 KLHDC3Q9BQ90 382 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 UBQLN4Q9NRR5 601 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 KLHL9Q9P2J3 617 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 KLK11Q9UBX7 282 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 OR5V1Q9UGF6 321 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 TVP23AA6NH52 213 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 SCDO00767 359 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 PEX14O75381 377 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 PDGFAP04085 211 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 TACSTD2P09758 323 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 ASAH2BP0C7U1 165 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 ADH7P40394 386 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 CAPZBP47756 277 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 SOX2P48431 317 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 PPM1FP49593 454 aaPredicted RBP13.08□□□□□ -0.32
HIF3A-202ENST00000244303 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.08□□□□□ -0.32
HIF3A-202ENST00000244303 FAM69AQ5T7M9 428 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 PWWP2BQ6NUJ5 590 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 OR5AK2Q8NH90 309 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 HGDQ93099 445 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 CCNL2Q96S94 520 aaPredicted RBP13.08□□□□□ -0.32
HIF3A-202ENST00000244303 LPAR4Q99677 370 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 PHF7Q9BWX1 381 aaPredicted RBP13.08□□□□□ -0.32
HIF3A-202ENST00000244303 SPRTNQ9H040 489 aaPredicted RBP13.08□□□□□ -0.32
HIF3A-202ENST00000244303 TTYH1Q9H313 450 aaPredicted RBP13.08□□□□□ -0.32
HIF3A-202ENST00000244303 DLL4Q9NR61 685 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 FRRS1LQ9P0K9 344 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 AKAP7Q9P0M2 348 aaPredicted RBP13.08□□□□□ -0.32
HIF3A-202ENST00000244303 RABL2AQ9UBK7 228 aaPredicted RBP13.08□□□□□ -0.32
HIF3A-202ENST00000244303 GMEB2Q9UKD1 530 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 RABL2BQ9UNT1 228 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 MOKQ9UQ07 419 aa13.08□□□□□ -0.32
HIF3A-202ENST00000244303 A0A1B0GTH9 108 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 I3L521 148 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 ZNF264O43296 627 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 KRT33AO76009 404 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 IGF2P01344 180 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 PROS1P07225 676 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 PTHLHP12272 177 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 GABRA4P48169 554 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 PTH2RP49190 550 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 FNTBP49356 437 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 ZP1P60852 638 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 RPS15P62841 145 aaKnown RBP13.07□□□□□ -0.32
HIF3A-202ENST00000244303 RPL18Q07020 188 aaKnown RBP13.07□□□□□ -0.32
HIF3A-202ENST00000244303 SMAD4Q13485 552 aaKnown RBP13.07□□□□□ -0.32
HIF3A-202ENST00000244303 CAMK2DQ13557 499 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 ALKBH1Q13686 389 aaKnown RBP13.07□□□□□ -0.32
HIF3A-202ENST00000244303 GRM7Q14831 915 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 Q499Y3 187 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 MESTQ5EB52 335 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 FAM174AQ8TBP5 190 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 PIGKQ92643 395 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 KTI12Q96EK9 354 aaPredicted RBP13.07□□□□□ -0.32
HIF3A-202ENST00000244303 S100A16Q96FQ6 103 aaKnown RBP13.07□□□□□ -0.32
HIF3A-202ENST00000244303 NXF5Q9H1B4 397 aaKnown RBP13.07□□□□□ -0.32
HIF3A-202ENST00000244303 FKRPQ9H9S5 495 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms