RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 AP2M1Q96CW1 435 aa-1.47□□□□□ -2.64
SNORA40.13-201ENST00000516379 CDKN2AIPNLQ96HQ2 116 aa-1.47□□□□□ -2.64
SNORA40.13-201ENST00000516379 OR5B2Q96R09 309 aa-1.47□□□□□ -2.64
SNORA40.13-201ENST00000516379 TREX2Q9BQ50 279 aaPredicted RBP-1.47□□□□□ -2.64
SNORA40.13-201ENST00000516379 MLPHQ9BV36 600 aaPredicted RBP-1.47□□□□□ -2.64
SNORA40.13-201ENST00000516379 CACNG6Q9BXT2 260 aa-1.47□□□□□ -2.64
SNORA40.13-201ENST00000516379 NAT10Q9H0A0 1025 aaKnown RBP-1.47□□□□□ -2.64
SNORA40.13-201ENST00000516379 PARP12Q9H0J9 701 aaKnown RBP-1.47□□□□□ -2.64
SNORA40.13-201ENST00000516379 CYSTM1Q9H1C7 97 aa-1.47□□□□□ -2.64
SNORA40.13-201ENST00000516379 CXCL16Q9H2A7 254 aa-1.47□□□□□ -2.64
SNORA40.13-201ENST00000516379 SUDS3Q9H7L9 328 aaPredicted RBP-1.47□□□□□ -2.64
SNORA40.13-201ENST00000516379 SRD5A3Q9H8P0 318 aa-1.47□□□□□ -2.64
SNORA40.13-201ENST00000516379 UGT1A7Q9HAW7 530 aa-1.47□□□□□ -2.64
SNORA40.13-201ENST00000516379 UGT1A10Q9HAW8 530 aa-1.47□□□□□ -2.64
SNORA40.13-201ENST00000516379 UGT1A8Q9HAW9 530 aa-1.47□□□□□ -2.64
SNORA40.13-201ENST00000516379 PALMDQ9NP74 551 aa-1.47□□□□□ -2.64
SNORA40.13-201ENST00000516379 PLAC8Q9NZF1 115 aa-1.47□□□□□ -2.64
SNORA40.13-201ENST00000516379 C22orf24Q9Y442 160 aa-1.47□□□□□ -2.64
SNORA40.13-201ENST00000516379 SNX8Q9Y5X2 465 aa-1.47□□□□□ -2.64
SNORA40.13-201ENST00000516379 FLNAP21333 2647 aaKnown RBP-1.47□□□□□ -2.65
SNORA40.13-201ENST00000516379 NPC1L1Q9UHC9 1359 aa-1.47□□□□□ -2.65
SNORA40.13-201ENST00000516379 ATP10DQ9P241 1426 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 NCKAP5O14513 1909 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 C12orf77C9JDV5 145 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 SYNGR2O43760 224 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 NME6O75414 186 aaPredicted RBP-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 SCELO95171 688 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 HSPA4LO95757 839 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 CYB5R3P00387 301 aaPredicted RBP-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 CSF3P09919 207 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 CPA3P15088 417 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 ZNF18P17022 549 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 ME2P23368 584 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 ATP5A1P25705 553 aaKnown RBP-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 ADRA1AP35348 466 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 SPP2Q13103 211 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 BIRC2Q13490 618 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 CEBPEQ15744 281 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 SNRNP35Q16560 246 aaKnown RBP-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 ANKRD22Q5VYY1 191 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 FAM205BPQ63HN1 556 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 KCTD16Q68DU8 428 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 MED27Q6P2C8 311 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 TMEM126BQ8IUX1 230 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 SBSPONQ8IVN8 264 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 ZNF645Q8N7E2 425 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 C12orf42Q96LP6 360 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 ZNF488Q96MN9 340 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 RIOK2Q9BVS4 552 aaKnown RBP-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 ANKRD2Q9GZV1 360 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 COMMD4Q9H0A8 199 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 OR52D1Q9H346 318 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 ZNF385DQ9H6B1 395 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 ZNF160Q9HCG1 818 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 GLRX2Q9NS18 164 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 SOX21Q9Y651 276 aaPredicted RBP-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 U3KQK5 164 aa-1.48□□□□□ -2.65
SNORA40.13-201ENST00000516379 ABCA2Q9BZC7 2435 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 NYNRINQ9P2P1 1898 aaKnown RBP-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 PIEZO1Q92508 2521 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 RTTNQ86VV8 2226 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 HTR3EA5X5Y0 456 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 CASKO14936 926 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 ZNF189O75820 626 aaPredicted RBP-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 IGLV3-25P01717 112 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 HLA-DPB1P04440 258 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 SFTPBP07988 381 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 ZFYP08048 801 aaPredicted RBP-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 GKN3PP0CG01 181 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 UROSP10746 265 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 PDHBP11177 359 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 ABOP16442 354 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 CTNNB1P35222 781 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 PARP6Q2NL67 630 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 ZBED5Q49AG3 693 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 TEX30Q5JUR7 227 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 NKAIN2Q5VXU1 208 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 CCDC137Q6PK04 289 aaKnown RBP-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 GRINAQ7Z429 371 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 LINC01561Q8N1V8 128 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 UXS1Q8NBZ7 420 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 OR6N1Q8NGY5 312 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 TBCDQ9BTW9 1192 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 POLR3FQ9H1D9 316 aaPredicted RBP-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 FOLH1BQ9HBA9 442 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 EXOSC4Q9NPD3 245 aaKnown RBP-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 C21orf62Q9NYP8 219 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 CEMIPQ8WUJ3 1361 aa-1.49□□□□□ -2.65
SNORA40.13-201ENST00000516379 RPRD2Q5VT52 1461 aaKnown RBP-1.5□□□□□ -2.65
SNORA40.13-201ENST00000516379 IGHV1OR15-9A0A0B4J2B8 117 aa-1.5□□□□□ -2.65
SNORA40.13-201ENST00000516379 IGHV1-3A0A0C4DH29 117 aa-1.5□□□□□ -2.65
SNORA40.13-201ENST00000516379 TTC26A0AVF1 554 aa-1.5□□□□□ -2.65
SNORA40.13-201ENST00000516379 C5orf51A6NDU8 294 aa-1.5□□□□□ -2.65
SNORA40.13-201ENST00000516379 ZSCAN12O43309 604 aa-1.5□□□□□ -2.65
SNORA40.13-201ENST00000516379 GMNNO75496 209 aa-1.5□□□□□ -2.65
SNORA40.13-201ENST00000516379 OXTP01178 125 aa-1.5□□□□□ -2.65
SNORA40.13-201ENST00000516379 ALDOBP05062 364 aa-1.5□□□□□ -2.65
SNORA40.13-201ENST00000516379 MMP7P09237 267 aaPredicted RBP-1.5□□□□□ -2.65
SNORA40.13-201ENST00000516379 HOXB8P17481 243 aaPredicted RBP-1.5□□□□□ -2.65
SNORA40.13-201ENST00000516379 GCAP28676 217 aa-1.5□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms