RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 AEBP2Q6ZN18 517 aaPredicted RBP14.4□□□□□ -0.1
SNORA40.13-201ENST00000516379 CHIC1Q5VXU3 224 aa13.36□□□□□ -0.27
SNORA40.13-201ENST00000516379 SENP3Q9H4L4 574 aaPredicted RBP12.32□□□□□ -0.44
SNORA40.13-201ENST00000516379 PHF23Q9BUL5 403 aaPredicted RBP12.09□□□□□ -0.47
SNORA40.13-201ENST00000516379 POTEDQ86YR6 584 aa11.95□□□□□ -0.5
SNORA40.13-201ENST00000516379 FOXD1Q16676 465 aa11.6□□□□□ -0.55
SNORA40.13-201ENST00000516379 MSH5O43196 834 aa11.05□□□□□ -0.64
SNORA40.13-201ENST00000516379 PIAS4Q8N2W9 510 aaPredicted RBP10.63□□□□□ -0.71
SNORA40.13-201ENST00000516379 PPP6R1Q9UPN7 881 aa10.37□□□□□ -0.75
SNORA40.13-201ENST00000516379 ADRA2BP18089 450 aa10.26□□□□□ -0.77
SNORA40.13-201ENST00000516379 PLPPR3Q6T4P5 718 aa10.06□□□□□ -0.8
SNORA40.13-201ENST00000516379 CACNB1Q02641 598 aaPredicted RBP9.87□□□□□ -0.83
SNORA40.13-201ENST00000516379 DMRT2Q9Y5R5 561 aa9.69□□□□□ -0.86
SNORA40.13-201ENST00000516379 MAPK8IP2Q13387 824 aaPredicted RBP9.64□□□□□ -0.87
SNORA40.13-201ENST00000516379 RNF39Q9H2S5 420 aa9.42□□□□□ -0.9
SNORA40.13-201ENST00000516379 SCAF1Q9H7N4 1312 aaKnown RBP9.32□□□□□ -0.92
SNORA40.13-201ENST00000516379 DCAF8L1A6NGE4 600 aa9.24□□□□□ -0.93
SNORA40.13-201ENST00000516379 C1QBPQ07021 282 aaKnown RBP9.21□□□□□ -0.94
SNORA40.13-201ENST00000516379 POTEHQ6S545 545 aa9.21□□□□□ -0.94
SNORA40.13-201ENST00000516379 HOXD11P31277 338 aaPredicted RBP9.09□□□□□ -0.95
SNORA40.13-201ENST00000516379 DNAJC5BQ9UF47 199 aa8.91□□□□□ -0.98
SNORA40.13-201ENST00000516379 RNF216Q9NWF9 866 aaPredicted RBP8.82□□□□□ -1
SNORA40.13-201ENST00000516379 PPP4R3CPQ6ZMV5 832 aa8.74□□□□□ -1.01
SNORA40.13-201ENST00000516379 CNKSR2Q8WXI2 1034 aa8.72□□□□□ -1.01
SNORA40.13-201ENST00000516379 DSG3P32926 999 aa8.6□□□□□ -1.03
SNORA40.13-201ENST00000516379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.58□□□□□ -1.04
SNORA40.13-201ENST00000516379 SPINK5Q9NQ38 1064 aaPredicted RBP8.47□□□□□ -1.05
SNORA40.13-201ENST00000516379 CAPN15O75808 1086 aa8.42□□□□□ -1.06
SNORA40.13-201ENST00000516379 U3KPZ7 1027 aaPredicted RBP8.39□□□□□ -1.07
SNORA40.13-201ENST00000516379 SP7Q8TDD2 431 aaPredicted RBP8.33□□□□□ -1.08
SNORA40.13-201ENST00000516379 CHRDL2Q6WN34 429 aa8.27□□□□□ -1.09
SNORA40.13-201ENST00000516379 ABCB7O75027 752 aa8.19□□□□□ -1.1
SNORA40.13-201ENST00000516379 RBM42Q9BTD8 480 aaKnown RBP8.16□□□□□ -1.1
SNORA40.13-201ENST00000516379 NCBP3Q53F19 620 aaKnown RBP8.15□□□□□ -1.1
SNORA40.13-201ENST00000516379 TRHP20396 242 aaPredicted RBP8.14□□□□□ -1.11
SNORA40.13-201ENST00000516379 NPM3O75607 178 aaKnown RBP8.11□□□□□ -1.11
SNORA40.13-201ENST00000516379 ZNF219Q9P2Y4 722 aaPredicted RBP8.1□□□□□ -1.11
SNORA40.13-201ENST00000516379 APLP2Q06481 763 aa7.99□□□□□ -1.13
SNORA40.13-201ENST00000516379 PIP4P2Q8N4L2 257 aa7.95□□□□□ -1.14
SNORA40.13-201ENST00000516379 HAX1O00165 279 aa7.94□□□□□ -1.14
SNORA40.13-201ENST00000516379 SLC4A2P04920 1241 aa7.94□□□□□ -1.14
SNORA40.13-201ENST00000516379 EVX2Q03828 476 aa7.88□□□□□ -1.15
SNORA40.13-201ENST00000516379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.86□□□□□ -1.15
SNORA40.13-201ENST00000516379 HNRNPUL2Q1KMD3 747 aaKnown RBP7.86□□□□□ -1.15
SNORA40.13-201ENST00000516379 AKT1S1Q96B36 256 aa7.86□□□□□ -1.15
SNORA40.13-201ENST00000516379 FXR2P51116 673 aaKnown RBP eCLIP7.81□□□□□ -1.16
SNORA40.13-201ENST00000516379 PLSCR2Q9NRY7 297 aa7.81□□□□□ -1.16
SNORA40.13-201ENST00000516379 POLA2Q14181 598 aa7.8□□□□□ -1.16
SNORA40.13-201ENST00000516379 LHX8Q68G74 356 aa7.8□□□□□ -1.16
SNORA40.13-201ENST00000516379 SAMD1Q6SPF0 538 aaPredicted RBP7.8□□□□□ -1.16
SNORA40.13-201ENST00000516379 REM2Q8IYK8 340 aaPredicted RBP7.8□□□□□ -1.16
SNORA40.13-201ENST00000516379 PITPNM1O00562 1244 aa7.72□□□□□ -1.17
SNORA40.13-201ENST00000516379 GABBR2O75899 941 aa7.62□□□□□ -1.19
SNORA40.13-201ENST00000516379 OSCARQ8IYS5 282 aa7.58□□□□□ -1.2
SNORA40.13-201ENST00000516379 C19orf67A6NJJ6 358 aa7.57□□□□□ -1.2
SNORA40.13-201ENST00000516379 ZBTB12Q9Y330 459 aaPredicted RBP7.55□□□□□ -1.2
SNORA40.13-201ENST00000516379 PRKAR2AP13861 404 aaKnown RBP7.5□□□□□ -1.21
SNORA40.13-201ENST00000516379 POTEIP0CG38 1075 aa7.49□□□□□ -1.21
SNORA40.13-201ENST00000516379 MYCNP04198 464 aaPredicted RBP7.48□□□□□ -1.21
SNORA40.13-201ENST00000516379 ATF5Q9Y2D1 282 aaPredicted RBP7.42□□□□□ -1.22
SNORA40.13-201ENST00000516379 POTEMA6NI47 508 aa7.37□□□□□ -1.23
SNORA40.13-201ENST00000516379 KCNA4P22459 653 aa7.37□□□□□ -1.23
SNORA40.13-201ENST00000516379 POTEGQ6S5H5 508 aa7.32□□□□□ -1.24
SNORA40.13-201ENST00000516379 OTUD5Q96G74 571 aa7.32□□□□□ -1.24
SNORA40.13-201ENST00000516379 CLEC11AQ9Y240 323 aa7.32□□□□□ -1.24
SNORA40.13-201ENST00000516379 SPDYE1Q8NFV5 336 aaPredicted RBP7.31□□□□□ -1.24
SNORA40.13-201ENST00000516379 SPDYE2BA6NHP3 402 aa7.29□□□□□ -1.24
SNORA40.13-201ENST00000516379 SPDYE6P0CI01 402 aa7.29□□□□□ -1.24
SNORA40.13-201ENST00000516379 SPDYE2Q495Y8 402 aa7.29□□□□□ -1.24
SNORA40.13-201ENST00000516379 CHADLQ6NUI6 762 aa7.28□□□□□ -1.24
SNORA40.13-201ENST00000516379 PCDH10Q9P2E7 1040 aa7.28□□□□□ -1.24
SNORA40.13-201ENST00000516379 CLCN6P51797 869 aa7.25□□□□□ -1.25
SNORA40.13-201ENST00000516379 POTEB2H3BUK9 544 aa7.24□□□□□ -1.25
SNORA40.13-201ENST00000516379 CD44P16070 742 aaKnown RBP7.22□□□□□ -1.25
SNORA40.13-201ENST00000516379 DCBLD2Q96PD2 775 aa7.22□□□□□ -1.25
SNORA40.13-201ENST00000516379 SSUH2Q9Y2M2 353 aa7.15□□□□□ -1.26
SNORA40.13-201ENST00000516379 LCE2DQ5TA82 110 aaPredicted RBP7.12□□□□□ -1.27
SNORA40.13-201ENST00000516379 PRR29P0C7W0 189 aa7.11□□□□□ -1.27
SNORA40.13-201ENST00000516379 FARP1Q9Y4F1 1045 aaPredicted RBP7.11□□□□□ -1.27
SNORA40.13-201ENST00000516379 ZNF579Q8NAF0 562 aaKnown RBP7.1□□□□□ -1.27
SNORA40.13-201ENST00000516379 ZNF692Q9BU19 519 aaPredicted RBP7.09□□□□□ -1.27
SNORA40.13-201ENST00000516379 FBLN2P98095 1184 aa7.08□□□□□ -1.28
SNORA40.13-201ENST00000516379 GALR2O43603 387 aaPredicted RBP7.07□□□□□ -1.28
SNORA40.13-201ENST00000516379 FOXD4L1Q9NU39 408 aa7.05□□□□□ -1.28
SNORA40.13-201ENST00000516379 POTEJP0CG39 1038 aa7.04□□□□□ -1.28
SNORA40.13-201ENST00000516379 MKRN4PQ13434 485 aaPredicted RBP7.04□□□□□ -1.28
SNORA40.13-201ENST00000516379 PELP1Q8IZL8 1130 aaKnown RBP7.01□□□□□ -1.29
SNORA40.13-201ENST00000516379 ZRANB1Q9UGI0 708 aa7.01□□□□□ -1.29
SNORA40.13-201ENST00000516379 FAM163AQ96GL9 167 aaPredicted RBP6.98□□□□□ -1.29
SNORA40.13-201ENST00000516379 PABPN1Q86U42 306 aaKnown RBP eCLIP6.97□□□□□ -1.29
SNORA40.13-201ENST00000516379 MAMSTRQ6ZN01 415 aa6.92□□□□□ -1.3
SNORA40.13-201ENST00000516379 CDAN1Q8IWY9 1227 aa6.92□□□□□ -1.3
SNORA40.13-201ENST00000516379 METRNQ9UJH8 293 aa6.92□□□□□ -1.3
SNORA40.13-201ENST00000516379 ATXN8OSP0DMR3 200 aa6.91□□□□□ -1.3
SNORA40.13-201ENST00000516379 C7P10643 843 aa6.88□□□□□ -1.31
SNORA40.13-201ENST00000516379 ASTLQ6HA08 431 aaPredicted RBP6.88□□□□□ -1.31
SNORA40.13-201ENST00000516379 PHF12Q96QT6 1004 aa6.87□□□□□ -1.31
SNORA40.13-201ENST00000516379 SLC39A7Q92504 469 aa6.86□□□□□ -1.31
SNORA40.13-201ENST00000516379 ATMINO43313 823 aaPredicted RBP6.84□□□□□ -1.31
SNORA40.13-201ENST00000516379 SCUBE2Q9NQ36 999 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms