RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 NPIPA7E9PJI5 369 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 SCDO00767 359 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 ENTPD5O75356 428 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 SEMG1P04279 462 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 FESP07332 822 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 NPIPA8P0DM63 369 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 RAP2AP10114 183 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 HPGDP15428 266 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 SLC25A16P16260 332 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 USF1P22415 310 aaPredicted RBP11.9□□□□□ -0.5
RPP40-204ENST00000468105 CFPP27918 469 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 CLK3P49761 638 aaKnown RBP11.9□□□□□ -0.5
RPP40-204ENST00000468105 KCNJ10P78508 379 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 LSM11P83369 360 aaKnown RBP eCLIP11.9□□□□□ -0.5
RPP40-204ENST00000468105 CHRNB3Q05901 458 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 PPA1Q15181 289 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 NDUFAF6Q330K2 333 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 FAM98BQ52LJ0 330 aaKnown RBP11.9□□□□□ -0.5
RPP40-204ENST00000468105 TMEM201Q5SNT2 666 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 PDZK1Q5T2W1 519 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 AGAP6Q5VW22 663 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 VRK2Q86Y07 508 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 MISPQ8IVT2 679 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 SMYD1Q8NB12 490 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 CANT1Q8WVQ1 401 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 GEMIN6Q8WXD5 167 aaKnown RBP11.9□□□□□ -0.5
RPP40-204ENST00000468105 FAM168AQ92567 244 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 PROX1Q92786 737 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 TPD52L3Q96J77 140 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 HSH2DQ96JZ2 352 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 RSPO3Q9BXY4 272 aaPredicted RBP11.9□□□□□ -0.5
RPP40-204ENST00000468105 CBLN4Q9NTU7 201 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 ARMC1Q9NVT9 282 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 PAQR5Q9NXK6 330 aaPredicted RBP11.9□□□□□ -0.5
RPP40-204ENST00000468105 PRDM4Q9UKN5 801 aa11.9□□□□□ -0.5
RPP40-204ENST00000468105 TRRAPQ9Y4A5 3859 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 A0A087WZY1 265 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 A0A1W2PNR3 127 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 CDHR4A6H8M9 788 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 H3BNH8 94 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 NDUFB5O43674 189 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 TPST1O60507 370 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 YES1P07947 543 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 COX5AP20674 150 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 MAGEA2P43356 314 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 OR3A2P47893 321 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 RIPK1Q13546 671 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 MST1LQ2TV78 715 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 MRPL2Q5T653 305 aaKnown RBP11.89□□□□□ -0.51
RPP40-204ENST00000468105 ZNF836Q6ZNA1 936 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 Q6ZT83 130 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 FKBP9P1Q75LS8 142 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 FCRLAQ7L513 359 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 PIWIL3Q7Z3Z3 882 aaKnown RBP11.89□□□□□ -0.51
RPP40-204ENST00000468105 VTCN1Q7Z7D3 282 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 MUC15Q8N387 334 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 FAM86B1Q8N7N1 296 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 FAM71CQ8NEG0 241 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 STMN2Q93045 179 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 SLCO4A1Q96BD0 722 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 ZBTB8AQ96BR9 441 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 SLC47A1Q96FL8 570 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 ADAD1Q96M93 576 aaKnown RBP11.89□□□□□ -0.51
RPP40-204ENST00000468105 ARHGDIGQ99819 225 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 DHRS9Q9BPW9 319 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 C1QTNF6Q9BXI9 259 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 YY1AP1Q9H869 796 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 S100A14Q9HCY8 104 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 IL1RAPQ9NPH3 570 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 SLC13A4Q9UKG4 626 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 SLC9A8Q9Y2E8 581 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 CHST2Q9Y4C5 530 aa11.89□□□□□ -0.51
RPP40-204ENST00000468105 LOC100289279A0A1B0GTE1 492 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 H7C417 338 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 SMAD9O15198 467 aaKnown RBP11.88□□□□□ -0.51
RPP40-204ENST00000468105 MGRN1O60291 552 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 IGHV3-9P01782 118 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 ITGA2P17301 1181 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 EGR1P18146 543 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 ZNF83P51522 516 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 ZNF117Q03924 483 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 GGTLC2Q14390 218 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 RAB35Q15286 201 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 TMEM176BQ3YBM2 270 aaPredicted RBP11.88□□□□□ -0.51
RPP40-204ENST00000468105 GLIPR1L2Q4G1C9 344 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 ZNF440Q8IYI8 595 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 ZNF433Q8N7K0 673 aaPredicted RBP11.88□□□□□ -0.51
RPP40-204ENST00000468105 ZNF614Q8N883 585 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 ATP6V1C2Q8NEY4 427 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 C7orf34Q96L11 122 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 SEPHS2Q99611 448 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 BCO1Q9HAY6 547 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 NGBQ9NPG2 151 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 FANCFQ9NPI8 374 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 EXOSC3Q9NQT5 275 aaKnown RBP11.88□□□□□ -0.51
RPP40-204ENST00000468105 AURKCQ9UQB9 309 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 SH3GLB1Q9Y371 365 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 AP4S1Q9Y587 144 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 SLC25A15Q9Y619 301 aa11.88□□□□□ -0.51
RPP40-204ENST00000468105 OR5H1A6NKK0 313 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms