RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Gbx1P82976 418 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Zfp729aQ4QQP3 973 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Tnfaip3Q60769 775 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Rdh16f2Q8K3M1 318 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Agpat4Q8K4X7 378 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 CcsapQ8QZT2 252 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Slc35a3Q8R1T4 326 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Tmed4Q8R1V4 227 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr572Q8VGZ3 318 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Otud1Q9CUB6 454 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Dusp3Q9D7X3 185 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Vmn2r49D3Z6L3 852 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Vmn2r32K7N686 852 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Efna3O08545 230 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Rasd1O35626 280 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Polr2iP60898 125 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Trim63Q38HM4 350 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr1015Q7TR94 312 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Rspo2Q8BFU0 243 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gpr107Q8BUV8 551 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 SptssaQ8R207 71 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Vmn1r81Q8R286 306 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Cd276Q8VE98 316 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Lnx2Q91XL2 687 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ttc3O88196 1979 aaKnown RBP11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Hoxb3P09026 433 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Crhr1P35347 415 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Hsd11b1P50172 292 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 CbfbQ08024 187 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Yy2Q3TTC2 378 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gal3st2cQ3ULK5 396 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Tmem253Q3UNB8 204 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Slc5a12Q49B93 619 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gpr152Q8BXS7 511 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ash2lQ91X20 623 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Pop4Q9CR08 221 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Qrsl1Q9CZN8 525 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Snu13Q9D0T1 128 aaKnown RBP10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Clca3a1Q9QX15 902 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Akirin2B1AXD8 201 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Mettl7a3G3X9G9 244 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Vmn2r69G3XA45 850 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Thbs1P35441 1170 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Npbwr1P49681 329 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Hes5P70120 167 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 St8sia1Q64687 355 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Tmem151aQ6GQT5 468 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr524Q7TRU0 318 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Map6Q7TSJ2 906 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 CenpxQ8C4X1 78 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Slc22a22Q8R0S9 554 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr558Q8VGZ7 317 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Satb2Q8VI24 733 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Sgk3Q9ERE3 496 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 H2-M11F6U8V3 335 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Nme2Q01768 152 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Dcdc2Q5DU00 475 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Kcmf1Q80UY2 381 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Rhox11Q810N8 206 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Nars2Q8BGV0 477 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Tmem17Q8K0U3 198 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Elf5Q8VDK3 253 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr763Q8VGC1 309 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Prss42Q8VIF2 335 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Memo1Q91VH6 297 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Alg2Q9DBE8 415 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Abhd5Q9DBL9 351 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Tyk2Q9R117 1184 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Shroom3Q9QXN0 1986 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Rnf39A2RT81 352 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Apoc1P34928 88 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Slc26a10Q5EBI0 492 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Serinc4Q5XK03 492 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Slc30a6Q8BJM5 460 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr460Q8VF31 314 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 EsamQ925F2 394 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Rp2Q9EPK2 347 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Trpv4Q9EPK8 871 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 DiabloQ9JIQ3 237 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Slc7a11Q9WTR6 502 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Myo5aQ99104 1853 aaKnown RBP10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Plin4O88492 1403 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm6569D3YTM9 175 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm4788E9Q8B5 879 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Slc30a4O35149 430 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Tp63O88898 680 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Nid1P10493 1245 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Bbs1Q3V3N7 593 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Cdc123Q8CII2 336 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr488Q8VG02 314 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Slc35a4Q9D321 324 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Lgi1Q9JIA1 557 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Cnot9Q9JKY0 299 aa10.99□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr424E9Q0Q2 315 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm6803J3QPI8 144 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Nkx3-2P97503 333 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ccdc106Q3ULM0 279 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Alg8Q6P8H8 526 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Lrrn3Q8CBC6 707 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 AcppQ8CE08 381 aa10.98□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms