Protein–RNA interactions for Protein: Q8R1V4

Tmed4, Transmembrane emp24 domain-containing protein 4, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed4Q8R1V4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29,43■■■□□ 2,3
Tmed4Q8R1V4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28,33■■■□□ 2,13
Tmed4Q8R1V4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28,23■■■□□ 2,11
Tmed4Q8R1V4 Gm25239-201ENSMUST00000174915 86 ntBASIC27,88■■■□□ 2,05
Tmed4Q8R1V4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27,74■■■□□ 2,03
Tmed4Q8R1V4 Psd-208ENSMUST00000224556 2034 ntBASIC27,65■■■□□ 2,02
Tmed4Q8R1V4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27,29■■□□□ 1,96
Tmed4Q8R1V4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26,8■■□□□ 1,88
Tmed4Q8R1V4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26,66■■□□□ 1,86
Tmed4Q8R1V4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26,35■■□□□ 1,81
Tmed4Q8R1V4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26,34■■□□□ 1,81
Tmed4Q8R1V4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26,3■■□□□ 1,8
Tmed4Q8R1V4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26,17■■□□□ 1,78
Tmed4Q8R1V4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26,1■■□□□ 1,77
Tmed4Q8R1V4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1,75
Tmed4Q8R1V4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25,95■■□□□ 1,74
Tmed4Q8R1V4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25,78■■□□□ 1,72
Tmed4Q8R1V4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25,74■■□□□ 1,71
Tmed4Q8R1V4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25,67■■□□□ 1,7
Tmed4Q8R1V4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25,56■■□□□ 1,68
Tmed4Q8R1V4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25,49■■□□□ 1,67
Tmed4Q8R1V4 Gm15042-201ENSMUST00000120212 883 ntBASIC25,36■■□□□ 1,65
Tmed4Q8R1V4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25,31■■□□□ 1,64
Tmed4Q8R1V4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25,3■■□□□ 1,64
Tmed4Q8R1V4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25,27■■□□□ 1,64
Tmed4Q8R1V4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25,21■■□□□ 1,63
Tmed4Q8R1V4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25,13■■□□□ 1,61
Tmed4Q8R1V4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25,12■■□□□ 1,61
Tmed4Q8R1V4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25,09■■□□□ 1,61
Tmed4Q8R1V4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25,01■■□□□ 1,59
Tmed4Q8R1V4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24,96■■□□□ 1,59
Tmed4Q8R1V4 Gm15045-201ENSMUST00000117359 883 ntBASIC24,93■■□□□ 1,58
Tmed4Q8R1V4 Gm42596-201ENSMUST00000196305 1958 ntBASIC24,88■■□□□ 1,57
Tmed4Q8R1V4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24,88■■□□□ 1,57
Tmed4Q8R1V4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24,87■■□□□ 1,57
Tmed4Q8R1V4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24,85■■□□□ 1,57
Tmed4Q8R1V4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24,85■■□□□ 1,57
Tmed4Q8R1V4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24,83■■□□□ 1,57
Tmed4Q8R1V4 Gm10524-201ENSMUST00000181931 1893 ntBASIC24,81■■□□□ 1,56
Tmed4Q8R1V4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24,78■■□□□ 1,56
Tmed4Q8R1V4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24,77■■□□□ 1,56
Tmed4Q8R1V4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24,75■■□□□ 1,55
Tmed4Q8R1V4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24,74■■□□□ 1,55
Tmed4Q8R1V4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24,7■■□□□ 1,54
Tmed4Q8R1V4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24,68■■□□□ 1,54
Tmed4Q8R1V4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24,64■■□□□ 1,54
Tmed4Q8R1V4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24,59■■□□□ 1,53
Tmed4Q8R1V4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24,58■■□□□ 1,53
Tmed4Q8R1V4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24,54■■□□□ 1,52
Tmed4Q8R1V4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24,51■■□□□ 1,51
Tmed4Q8R1V4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24,49■■□□□ 1,51
Tmed4Q8R1V4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24,45■■□□□ 1,5
Tmed4Q8R1V4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24,42■■□□□ 1,5
Tmed4Q8R1V4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24,4■■□□□ 1,5
Tmed4Q8R1V4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24,36■■□□□ 1,49
Tmed4Q8R1V4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24,29■■□□□ 1,48
Tmed4Q8R1V4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24,28■■□□□ 1,48
Tmed4Q8R1V4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24,23■■□□□ 1,47
Tmed4Q8R1V4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24,22■■□□□ 1,47
Tmed4Q8R1V4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24,15■■□□□ 1,46
Tmed4Q8R1V4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24,11■■□□□ 1,45
Tmed4Q8R1V4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24,04■■□□□ 1,44
Tmed4Q8R1V4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24,03■■□□□ 1,44
Tmed4Q8R1V4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24,03■■□□□ 1,44
Tmed4Q8R1V4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23,97■■□□□ 1,43
Tmed4Q8R1V4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23,97■■□□□ 1,43
Tmed4Q8R1V4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23,96■■□□□ 1,43
Tmed4Q8R1V4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23,95■■□□□ 1,42
Tmed4Q8R1V4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23,88■■□□□ 1,41
Tmed4Q8R1V4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23,86■■□□□ 1,41
Tmed4Q8R1V4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23,84■■□□□ 1,41
Tmed4Q8R1V4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23,8■■□□□ 1,4
Tmed4Q8R1V4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23,77■■□□□ 1,4
Tmed4Q8R1V4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23,76■■□□□ 1,39
Tmed4Q8R1V4 Gm24109-201ENSMUST00000175489 103 ntBASIC23,68■■□□□ 1,38
Tmed4Q8R1V4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23,66■■□□□ 1,38
Tmed4Q8R1V4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23,65■■□□□ 1,38
Tmed4Q8R1V4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23,64■■□□□ 1,37
Tmed4Q8R1V4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23,62■■□□□ 1,37
Tmed4Q8R1V4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23,62■■□□□ 1,37
Tmed4Q8R1V4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23,62■■□□□ 1,37
Tmed4Q8R1V4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23,58■■□□□ 1,36
Tmed4Q8R1V4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23,54■■□□□ 1,36
Tmed4Q8R1V4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23,54■■□□□ 1,36
Tmed4Q8R1V4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23,51■■□□□ 1,35
Tmed4Q8R1V4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23,47■■□□□ 1,35
Tmed4Q8R1V4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23,45■■□□□ 1,34
Tmed4Q8R1V4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23,45■■□□□ 1,34
Tmed4Q8R1V4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23,43■■□□□ 1,34
Tmed4Q8R1V4 Gm23366-201ENSMUST00000175022 89 ntBASIC23,43■■□□□ 1,34
Tmed4Q8R1V4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23,42■■□□□ 1,34
Tmed4Q8R1V4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23,41■■□□□ 1,34
Tmed4Q8R1V4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23,39■■□□□ 1,34
Tmed4Q8R1V4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23,39■■□□□ 1,33
Tmed4Q8R1V4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23,38■■□□□ 1,33
Tmed4Q8R1V4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23,38■■□□□ 1,33
Tmed4Q8R1V4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23,34■■□□□ 1,33
Tmed4Q8R1V4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23,33■■□□□ 1,33
Tmed4Q8R1V4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23,33■■□□□ 1,32
Tmed4Q8R1V4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23,31■■□□□ 1,32
Retrieved 100 of 76,532 protein–RNA pairs in 11,2 ms