RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 OR5H1A6NKK0 313 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 CPSF4LA6NMK7 179 aaKnown RBP14.51□□□□□ -0.09
DDX41-213ENST00000512027 LRRN3E7EW58 273 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 M0R082 166 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 PDLIM1O00151 329 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 CNOT4O95628 575 aaKnown RBP14.51□□□□□ -0.09
DDX41-213ENST00000512027 LGI1O95970 557 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 GRPRP30550 384 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 SELENOPP49908 381 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 CDH12P55289 794 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 ADAM8P78325 824 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 MAPRE2Q15555 327 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 ULK3Q6PHR2 472 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 CREB3L2Q70SY1 520 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 AAED1Q7RTV5 226 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 RANBP3LQ86VV4 465 aaPredicted RBP14.51□□□□□ -0.09
DDX41-213ENST00000512027 CALHM3Q86XJ0 350 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 TGIF2LYQ8IUE0 185 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 KRTAP1-3Q8IUG1 177 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 EPHX4Q8IUS5 362 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 KBTBD8Q8NFY9 601 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 ZNF417Q8TAU3 575 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 DNAJA4Q8WW22 397 aaPredicted RBP14.51□□□□□ -0.09
DDX41-213ENST00000512027 AKAP1Q92667 903 aaKnown RBP eCLIP14.51□□□□□ -0.09
DDX41-213ENST00000512027 SLC38A4Q969I6 547 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 TMEM45BQ96B21 275 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 ZNF587Q96SQ5 575 aaPredicted RBP14.51□□□□□ -0.09
DDX41-213ENST00000512027 MCHR1Q99705 422 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 SF3B5Q9BWJ5 86 aaKnown RBP14.51□□□□□ -0.09
DDX41-213ENST00000512027 C12orf10Q9HB07 376 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 TMEM27Q9HBJ8 222 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 TAS2R16Q9NYV7 291 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 UPB1Q9UBR1 384 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 PRDM4Q9UKN5 801 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 RNF115Q9Y4L5 304 aa14.51□□□□□ -0.09
DDX41-213ENST00000512027 BBIP1A8MTZ0 92 aa14.5□□□□□ -0.09
DDX41-213ENST00000512027 THY1P04216 161 aa14.5□□□□□ -0.09
DDX41-213ENST00000512027 CDH2P19022 906 aaPredicted RBP14.5□□□□□ -0.09
DDX41-213ENST00000512027 TNFRSF1BP20333 461 aa14.5□□□□□ -0.09
DDX41-213ENST00000512027 GTF2E2P29084 291 aaKnown RBP14.5□□□□□ -0.09
DDX41-213ENST00000512027 SEC24CP53992 1094 aa14.5□□□□□ -0.09
DDX41-213ENST00000512027 SLC25A3Q00325 362 aa14.5□□□□□ -0.09
DDX41-213ENST00000512027 LTBQ06643 244 aa14.5□□□□□ -0.09
DDX41-213ENST00000512027 FOXD4Q12950 439 aaPredicted RBP14.5□□□□□ -0.09
DDX41-213ENST00000512027 GABRA6Q16445 453 aa14.5□□□□□ -0.09
DDX41-213ENST00000512027 COQ5Q5HYK3 327 aa14.5□□□□□ -0.09
DDX41-213ENST00000512027 TIMM23BQ5SRD1 257 aa14.5□□□□□ -0.09
DDX41-213ENST00000512027 FAM91A1Q658Y4 838 aa14.5□□□□□ -0.09
DDX41-213ENST00000512027 ADAM5Q6NVV9 412 aa14.5□□□□□ -0.09
DDX41-213ENST00000512027 PATL1Q86TB9 770 aaKnown RBP14.5□□□□□ -0.09
DDX41-213ENST00000512027 BHLHE22Q8NFJ8 381 aaPredicted RBP14.5□□□□□ -0.09
DDX41-213ENST00000512027 OR8J3Q8NGG0 315 aa14.5□□□□□ -0.09
DDX41-213ENST00000512027 SLC26A7Q8TE54 656 aa14.5□□□□□ -0.09
DDX41-213ENST00000512027 SLC47A1Q96FL8 570 aa14.5□□□□□ -0.09
DDX41-213ENST00000512027 ALKBH3Q96Q83 286 aaPredicted RBP14.5□□□□□ -0.09
DDX41-213ENST00000512027 ECSITQ9BQ95 431 aa14.5□□□□□ -0.09
DDX41-213ENST00000512027 C1QTNF6Q9BXI9 259 aa14.5□□□□□ -0.09
DDX41-213ENST00000512027 SLCO5A1Q9H2Y9 848 aa14.5□□□□□ -0.09
DDX41-213ENST00000512027 BEX4Q9NWD9 120 aaPredicted RBP14.5□□□□□ -0.09
DDX41-213ENST00000512027 PARPBPQ9NWS1 579 aa14.5□□□□□ -0.09
DDX41-213ENST00000512027 B3GAT1Q9P2W7 334 aa14.5□□□□□ -0.09
DDX41-213ENST00000512027 ARID1AO14497 2285 aa14.5□□□□□ -0.09
DDX41-213ENST00000512027 SETD2Q9BYW2 2564 aaPredicted RBP14.49□□□□□ -0.09
DDX41-213ENST00000512027 TRAV36DV7A0A075B6V5 113 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 A0A087WUJ7 227 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 HS3ST1O14792 307 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 CD3EP07766 207 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 ZNF83P51522 516 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 SPOCK1Q08629 439 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 ENTPD8Q5MY95 495 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 FAM69AQ5T7M9 428 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 NIPAL3Q6P499 406 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 WDR88Q6ZMY6 472 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 C20orf204Q6ZNR8 217 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 LINGO2Q7L985 606 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 TREML1Q86YW5 311 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 SLC30A8Q8IWU4 369 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 MUCL1Q96DR8 90 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 PERPQ96FX8 193 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 ZNF583Q96ND8 569 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 MOGAT1Q96PD6 335 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 TMUB1Q9BVT8 246 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 FAM107BQ9H098 131 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 ESRP2Q9H6T0 727 aaKnown RBP14.49□□□□□ -0.09
DDX41-213ENST00000512027 SELENONQ9NZV5 590 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 RASD1Q9Y272 281 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 SLC25A15Q9Y619 301 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 NF1P21359 2839 aa14.49□□□□□ -0.09
DDX41-213ENST00000512027 ATP8B1O43520 1251 aa14.48□□□□□ -0.09
DDX41-213ENST00000512027 SHOX2O60902 331 aaPredicted RBP14.48□□□□□ -0.09
DDX41-213ENST00000512027 SMPD2O60906 423 aa14.48□□□□□ -0.09
DDX41-213ENST00000512027 FZD7O75084 574 aa14.48□□□□□ -0.09
DDX41-213ENST00000512027 UPK3AO75631 287 aa14.48□□□□□ -0.09
DDX41-213ENST00000512027 VAMP5O95183 116 aa14.48□□□□□ -0.09
DDX41-213ENST00000512027 LYPD3O95274 346 aa14.48□□□□□ -0.09
DDX41-213ENST00000512027 HPRP00739 348 aa14.48□□□□□ -0.09
DDX41-213ENST00000512027 BGLAPP02818 100 aa14.48□□□□□ -0.09
DDX41-213ENST00000512027 COX4I1P13073 169 aa14.48□□□□□ -0.09
DDX41-213ENST00000512027 CD99P14209 185 aa14.48□□□□□ -0.09
DDX41-213ENST00000512027 GYS2P54840 703 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms