RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 RhbgQ8BUX5 455 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr1466Q8VFW4 310 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Eef1akmt1Q9CY45 214 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Wdr89Q9D0R9 386 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Vmn1r48Q9EQ52 302 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Clec4eQ9R0Q8 214 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Mbd4Q9Z2D7 554 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr1493-ps1A0A140LHU2 316 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Zfp993A2A8V4 313 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Fbxw24E9PXM9 466 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Vmn1r13G5E8I3 300 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 UgdhO70475 493 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Hcrtr2P58308 460 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Pou3f4P62515 361 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Hist1h3bP84228 136 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Cdk2P97377 346 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Lhfpl5Q4KL25 219 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 4930438A08RikQ5SPH3 536 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 CmahQ61419 577 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 GcaQ8VC88 220 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr1423Q8VFV0 310 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Papd4Q91YI6 484 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Q922R1 422 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 RtcAQ9D7H3 366 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 DhdhQ9DBB8 333 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Scn7aB1AYL1 1681 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gm5678A0A1B0GRG8 277 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Vmn1r55E9Q8I6 310 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Vmn1r204I7HIK1 302 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Shisa8J3QNX5 399 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gjd2O54851 321 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 P06335 190 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 FlgP11088 336 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Sstr4P49660 385 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 PdxpP60487 292 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Fahd2Q3TC72 313 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Krba1Q6NXZ1 1043 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 GnptgQ6S5C2 307 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Smco3Q8BQM7 225 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Slc1a7Q8JZR4 559 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Tmem242Q8VCR3 140 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Mtmr14Q8VEL2 648 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Upk1aQ9D132 257 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Zdhhc4Q9D6H5 343 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Jam3Q9D8B7 310 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 ClcnkaQ9WUB7 687 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Cav2Q9WVC3 162 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Golga4Q91VW5 2238 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr619E9PV95 320 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Hoxd9P28357 339 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Itpripl2Q3UV16 535 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gcnt7Q3V3K7 433 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Map3k3Q61084 626 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 ArhgdibQ61599 200 aaKnown RBP9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Tmem130Q6NXM3 419 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr160Q8VGE3 309 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Lrg1Q91XL1 342 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Spns3Q9D232 514 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Obp1aQ9D3H2 163 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Slc9a3r2Q9JHL1 337 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Lmx1aQ9JKU8 382 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 NmuQ9QXK8 174 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr576A0A0G2JFH3 312 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr31E9Q3K2 317 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 SparcP07214 302 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Slc12a3P59158 1002 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 PrtgQ2EY15 1191 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr320Q7TRZ4 306 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 NraddQ8CJ26 228 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Q8R3C1 574 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Swsap1Q8VCI7 278 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr54Q8VFE6 313 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr1257Q8VGP0 309 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Pttg1Q9CQJ7 199 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 B4galt2Q9Z2Y2 369 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr663A0A1B0GSI9 319 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gm3676D3Z236 184 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gm3573L7N292 184 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Agpat1O35083 285 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Adam19O35674 920 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 NnmtO55239 264 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 P01851 173 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 P01852 173 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Prdx1P35700 199 aaKnown RBP9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Fosl1P48755 273 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Hif3aQ0VBL6 662 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Tbrg1Q3UB74 406 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 EndouQ3V188 412 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Ntmt1Q8R2U4 223 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr166Q8VGX2 312 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 MtfmtQ9D799 386 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Amdhd1Q9DBA8 426 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 RgccQ9DBX1 137 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Eif3fQ9DCH4 361 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Eny2Q9JIX0 101 aaKnown RBP9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Wdr54Q9R0D8 334 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Zfp69A2A761 587 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Zfp820E9Q5G8 549 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 ChrneP20782 493 aa9.5□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Ceacam19Q3TQ88 271 aa9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms