Protein–RNA interactions for Protein: Q9D7H3

RtcA, RNA 3'-terminal phosphate cyclase, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcAQ9D7H3 Gm25239-201ENSMUST00000174915 86 ntBASIC36.7■■■■□ 3.47
RtcAQ9D7H3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.81■■■■□ 3
RtcAQ9D7H3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
RtcAQ9D7H3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
RtcAQ9D7H3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
RtcAQ9D7H3 Gm15042-201ENSMUST00000120212 883 ntBASIC32.35■■■□□ 2.77
RtcAQ9D7H3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.04■■■□□ 2.72
RtcAQ9D7H3 Gm15045-201ENSMUST00000117359 883 ntBASIC31.7■■■□□ 2.67
RtcAQ9D7H3 Gm24109-201ENSMUST00000175489 103 ntBASIC31.68■■■□□ 2.66
RtcAQ9D7H3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RtcAQ9D7H3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RtcAQ9D7H3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
RtcAQ9D7H3 Psd-208ENSMUST00000224556 2034 ntBASIC30.71■■■□□ 2.51
RtcAQ9D7H3 Gm23366-201ENSMUST00000175022 89 ntBASIC30.66■■■□□ 2.5
RtcAQ9D7H3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.62■■■□□ 2.49
RtcAQ9D7H3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
RtcAQ9D7H3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RtcAQ9D7H3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
RtcAQ9D7H3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RtcAQ9D7H3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.44
RtcAQ9D7H3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RtcAQ9D7H3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RtcAQ9D7H3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
RtcAQ9D7H3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
RtcAQ9D7H3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
RtcAQ9D7H3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RtcAQ9D7H3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.86■■■□□ 2.37
RtcAQ9D7H3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
RtcAQ9D7H3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.71■■■□□ 2.35
RtcAQ9D7H3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
RtcAQ9D7H3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RtcAQ9D7H3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RtcAQ9D7H3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.44■■■□□ 2.3
RtcAQ9D7H3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
RtcAQ9D7H3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.35■■■□□ 2.29
RtcAQ9D7H3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.05■■■□□ 2.24
RtcAQ9D7H3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
RtcAQ9D7H3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
RtcAQ9D7H3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RtcAQ9D7H3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RtcAQ9D7H3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
RtcAQ9D7H3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RtcAQ9D7H3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
RtcAQ9D7H3 Gm25238-201ENSMUST00000174914 89 ntBASIC28.89■■■□□ 2.22
RtcAQ9D7H3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.87■■■□□ 2.21
RtcAQ9D7H3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RtcAQ9D7H3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
RtcAQ9D7H3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.76■■■□□ 2.19
RtcAQ9D7H3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.71■■■□□ 2.19
RtcAQ9D7H3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RtcAQ9D7H3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
RtcAQ9D7H3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
RtcAQ9D7H3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
RtcAQ9D7H3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
RtcAQ9D7H3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
RtcAQ9D7H3 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.4■■■□□ 2.14
RtcAQ9D7H3 Gm27325-201ENSMUST00000175467 74 ntBASIC28.39■■■□□ 2.14
RtcAQ9D7H3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.35■■■□□ 2.13
RtcAQ9D7H3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RtcAQ9D7H3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.11
RtcAQ9D7H3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RtcAQ9D7H3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.21■■■□□ 2.11
RtcAQ9D7H3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RtcAQ9D7H3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.15■■■□□ 2.1
RtcAQ9D7H3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
RtcAQ9D7H3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RtcAQ9D7H3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
RtcAQ9D7H3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
RtcAQ9D7H3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
RtcAQ9D7H3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.98■■■□□ 2.07
RtcAQ9D7H3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
RtcAQ9D7H3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
RtcAQ9D7H3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.96■■■□□ 2.07
RtcAQ9D7H3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.96■■■□□ 2.07
RtcAQ9D7H3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
RtcAQ9D7H3 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.92■■■□□ 2.06
RtcAQ9D7H3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
RtcAQ9D7H3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.84■■■□□ 2.05
RtcAQ9D7H3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
RtcAQ9D7H3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
RtcAQ9D7H3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.69■■■□□ 2.02
RtcAQ9D7H3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
RtcAQ9D7H3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RtcAQ9D7H3 Rab21-202ENSMUST00000218831 843 ntBASIC27.66■■■□□ 2.02
RtcAQ9D7H3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
RtcAQ9D7H3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.54■■■□□ 2
RtcAQ9D7H3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RtcAQ9D7H3 Gm25262-201ENSMUST00000174934 133 ntBASIC27.47■■□□□ 1.99
RtcAQ9D7H3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
RtcAQ9D7H3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RtcAQ9D7H3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.4■■□□□ 1.98
RtcAQ9D7H3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.39■■□□□ 1.98
RtcAQ9D7H3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.37■■□□□ 1.97
RtcAQ9D7H3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RtcAQ9D7H3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RtcAQ9D7H3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
RtcAQ9D7H3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RtcAQ9D7H3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RtcAQ9D7H3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RtcAQ9D7H3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms