RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 UQCRC1P31930 480 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TTKP33981 857 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 AQP2P41181 271 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SLC15A1P46059 708 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CDH11P55287 796 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 EMX1Q04741 257 aaPredicted RBP6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 LTBQ06643 244 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ST3GAL4Q11206 333 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CAMK2BQ13554 666 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 MFSD13AQ14CX5 517 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 RSPO4Q2I0M5 234 aaPredicted RBP6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 GXYLT1Q4G148 440 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 KLHL22Q53GT1 634 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ALG10Q5BKT4 473 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SLC35F1Q5T1Q4 408 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 FAM69AQ5T7M9 428 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ATP1A1-AS1Q5TC04 95 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 C1QL3Q5VWW1 255 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 NXNL2Q5VZ03 156 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 XAF1Q6GPH4 301 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PLBD1Q6P4A8 553 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 DPY19L2P2Q6ZN68 376 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CCDC81Q6ZN84 652 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CXXC5Q7LFL8 322 aaKnown RBP6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 MDGA2Q7Z553 956 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 BCDIN3DQ7Z5W3 292 aaKnown RBP6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 IGFN1Q86VF2 1251 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CPOQ8IVL8 374 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 GID4Q8IVV7 300 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 GALNT16Q8N428 558 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PSD4Q8NDX1 1056 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 OR6S1Q8NH40 331 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 MOSPD2Q8NHP6 518 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 C9orf43Q8TAL5 461 aaPredicted RBP6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 RORBQ92753 470 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TMIGD2Q96BF3 282 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 OTULINQ96BN8 352 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SLC25A36Q96CQ1 311 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 NTNG2Q96CW9 530 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 DDIT4LQ96D03 193 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TMEM80Q96HE8 168 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 JSRP1Q96MG2 331 aaPredicted RBP6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SIGLEC11Q96RL6 698 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 GPX7Q96SL4 187 aaPredicted RBP6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TUBA1CQ9BQE3 449 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 UTP23Q9BRU9 249 aaKnown RBP6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PTDSS2Q9BVG9 487 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ASPNQ9BXN1 380 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 OR11A1Q9GZK7 315 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 HINT3Q9NQE9 182 aaKnown RBP6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CMC2Q9NRP2 79 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 LRFN1Q9P244 771 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 KLHL21Q9UJP4 597 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 NCKAP5O14513 1909 aa6.91□□□□□ -1.3
SCARNA20.1-201ENST00000516009 KIAA1549Q9HCM3 1950 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 DCDC2BA2VCK2 349 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CCDC160A6NGH7 325 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 FAM183AA6NL82 134 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ZNF99A8MXY4 864 aaPredicted RBP6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SHISA8B8ZZ34 492 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PRR23D1E9PI22 279 aaPredicted RBP6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 IMPA2O14732 288 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ARPC3O15145 178 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 NKX2-8O15522 239 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TRIM3O75382 744 aaPredicted RBP6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CBR3O75828 277 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CD14P08571 375 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PRR23D2P0DMB1 279 aaPredicted RBP6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PRKAR1AP10644 381 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TFPIP10646 304 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 APEHP13798 732 aaKnown RBP6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PCMT1P22061 227 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PAICSP22234 425 aaKnown RBP6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TCEA1P23193 301 aaKnown RBP6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 FKBP2P26885 142 aaKnown RBP6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ACVR2AP27037 513 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 C21orf33P30042 268 aaPredicted RBP6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 GRPRP30550 384 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 HTR1FP30939 366 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 IDUAP35475 653 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CD96P40200 585 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 MAP2K4P45985 399 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 MTNR1AP48039 350 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 DNASE1L1P49184 302 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 DSCR4P56555 118 aaPredicted RBP6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SOX8P57073 446 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CTXN1P60606 82 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ERVK-25P63136 954 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 RPL18Q07020 188 aaKnown RBP6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SELENBP1Q13228 472 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CLN3Q13286 438 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ITGADQ13349 1161 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PMS2P3Q13401 168 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TUBA3CQ13748 450 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CRMP1Q14194 572 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 RAB39AQ14964 217 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TBCEQ15813 527 aaPredicted RBP6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SGCBQ16585 318 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TBC1D25Q3MII6 688 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms