RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 GatmQ9D964 423 aaKnown RBP15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Bex3Q9WTZ9 124 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Padi1Q9Z185 662 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr1275Q7TQY8 312 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Tmem163Q8C996 288 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr1391Q8VFA4 311 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Tmem70Q921N7 253 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Bex4Q9CWT2 118 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Rtl8bQ9D1F0 113 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Cpne8Q9DC53 577 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Scnn1gQ9WU39 655 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr1084A0A1L1STZ9 313 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Slc16a5G5E8K6 468 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Q80UB0 333 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Lpar4Q8BLG2 370 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Slc1a7Q8JZR4 559 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Lgi4Q8K1S1 537 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Ly6g5cQ8K1T5 149 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr569Q8VGZ2 314 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr713Q920G5 324 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Mcts1Q9DB27 181 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 PlpbpQ9Z2Y8 274 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Col5a2Q3U962 1497 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Kcnmb3E9Q7U0 239 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Malt1Q2TBA3 832 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Vmn1r225Q8R2A5 298 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Hyal1Q91ZJ9 462 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Pmepa1Q9D7R2 260 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Dhcr7O88455 471 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Tmem130Q6NXM3 419 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr538Q7TRT5 310 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Vangl1Q80Z96 526 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 GabrpQ8QZW7 440 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Abcg5Q99PE8 652 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Ms4a4cQ9D3F6 226 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 EhfO70273 300 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Prdx1P35700 199 aaKnown RBP15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 PmchP56942 165 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Sort1Q6PHU5 825 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 PigmQ8C2R7 423 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr769Q8K501 312 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr535Q8VGL3 312 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Hey1Q9WV93 299 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 GlsD3Z7P3 674 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Agr2O88312 175 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 CryabP23927 175 aaKnown RBP15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Bcl2a1cQ0P538 128 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Dio1Q61153 257 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 SypQ62277 314 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Mmp19Q9JHI0 527 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Cry2Q9R194 592 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Gm42421F6X8D5 166 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Bet1O35623 118 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr1008Q8VGC7 313 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Tomm40lQ9CZR3 308 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Isca2Q9DCB8 154 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Casp6O08738 276 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Rpp30O88796 268 aaKnown RBP15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Slc37a3Q3TIT8 494 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Cd300aQ6SJQ0 318 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr126Q8VGF0 319 aa15.6■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Ank1Q02357 1862 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Adrb2P18762 418 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr859Q7TRF5 309 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 SetmarQ80UJ9 309 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 2410002F23RikQ3TE80 284 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Vdac3Q60931 283 aaKnown RBP15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr517Q7TRU4 314 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Q8C5S3 137 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 PhyhipQ8K0S0 330 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 9230113P08RikD3YWX3 137 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 EnsaP60840 121 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Kcnj8P97794 424 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 InhbbQ04999 411 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr131Q8VGC8 314 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Med6Q921D4 246 aaKnown RBP15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Taar1Q923Y8 332 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Tbl1xQ9QXE7 527 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Srpk3Q9Z0G2 565 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Sptbn1Q62261 2363 aaKnown RBP15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr1157A2AVC4 312 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr224M9MMJ7 314 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Nid1P10493 1245 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Senp8Q9D2Z4 221 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Kdf1A2A9F4 397 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Gtf2h4O70422 463 aaKnown RBP15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 F2rl3O88634 396 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 PgfP49764 158 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Ndufa6Q9CQZ5 131 aaKnown RBP15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Prss55Q14BX2 321 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 2610318N02RikQ80VT5 305 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Neto1Q8R4I7 533 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Ier3ip1Q9CR20 82 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Trav6-7-dv9A0A075B639 125 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Gm42420A0A0J9YUQ2 99 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr1303A2AVW1 312 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 4933403O08RikF6UK53 379 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 LckP06240 509 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Gpr25P0C5I1 358 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Rab11aP62492 216 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms