Protein–RNA interactions for Protein: Q3TE80

2410002F23Rik, RIKEN cDNA 2410002F23 gene, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2410002F23RikQ3TE80 Gm25239-201ENSMUST00000174915 86 ntBASIC34.8■■■■□ 3.16
2410002F23RikQ3TE80 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
2410002F23RikQ3TE80 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
2410002F23RikQ3TE80 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
2410002F23RikQ3TE80 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
2410002F23RikQ3TE80 Gm15042-201ENSMUST00000120212 883 ntBASIC30.7■■■□□ 2.51
2410002F23RikQ3TE80 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
2410002F23RikQ3TE80 Gm15045-201ENSMUST00000117359 883 ntBASIC30.08■■■□□ 2.41
2410002F23RikQ3TE80 Gm24109-201ENSMUST00000175489 103 ntBASIC30■■■□□ 2.39
2410002F23RikQ3TE80 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
2410002F23RikQ3TE80 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
2410002F23RikQ3TE80 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
2410002F23RikQ3TE80 Psd-208ENSMUST00000224556 2034 ntBASIC29.33■■■□□ 2.29
2410002F23RikQ3TE80 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.17■■■□□ 2.26
2410002F23RikQ3TE80 Gm23366-201ENSMUST00000175022 89 ntBASIC29.08■■■□□ 2.25
2410002F23RikQ3TE80 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
2410002F23RikQ3TE80 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
2410002F23RikQ3TE80 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
2410002F23RikQ3TE80 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
2410002F23RikQ3TE80 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
2410002F23RikQ3TE80 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
2410002F23RikQ3TE80 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
2410002F23RikQ3TE80 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
2410002F23RikQ3TE80 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.16
2410002F23RikQ3TE80 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
2410002F23RikQ3TE80 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.42■■■□□ 2.14
2410002F23RikQ3TE80 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
2410002F23RikQ3TE80 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
2410002F23RikQ3TE80 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
2410002F23RikQ3TE80 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
2410002F23RikQ3TE80 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.24■■■□□ 2.11
2410002F23RikQ3TE80 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
2410002F23RikQ3TE80 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.06■■■□□ 2.08
2410002F23RikQ3TE80 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
2410002F23RikQ3TE80 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
2410002F23RikQ3TE80 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.78■■■□□ 2.04
2410002F23RikQ3TE80 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
2410002F23RikQ3TE80 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
2410002F23RikQ3TE80 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
2410002F23RikQ3TE80 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
2410002F23RikQ3TE80 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.52■■■□□ 2
2410002F23RikQ3TE80 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.5■■□□□ 1.99
2410002F23RikQ3TE80 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
2410002F23RikQ3TE80 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
2410002F23RikQ3TE80 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
2410002F23RikQ3TE80 Gm25238-201ENSMUST00000174914 89 ntBASIC27.38■■□□□ 1.97
2410002F23RikQ3TE80 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.34■■□□□ 1.97
2410002F23RikQ3TE80 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
2410002F23RikQ3TE80 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.28■■□□□ 1.96
2410002F23RikQ3TE80 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
2410002F23RikQ3TE80 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
2410002F23RikQ3TE80 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
2410002F23RikQ3TE80 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
2410002F23RikQ3TE80 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
2410002F23RikQ3TE80 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.12■■□□□ 1.93
2410002F23RikQ3TE80 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
2410002F23RikQ3TE80 Gm27325-201ENSMUST00000175467 74 ntBASIC26.97■■□□□ 1.91
2410002F23RikQ3TE80 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
2410002F23RikQ3TE80 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.9■■□□□ 1.9
2410002F23RikQ3TE80 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
2410002F23RikQ3TE80 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
2410002F23RikQ3TE80 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
2410002F23RikQ3TE80 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.83■■□□□ 1.89
2410002F23RikQ3TE80 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
2410002F23RikQ3TE80 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.8■■□□□ 1.88
2410002F23RikQ3TE80 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
2410002F23RikQ3TE80 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
2410002F23RikQ3TE80 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.69■■□□□ 1.86
2410002F23RikQ3TE80 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
2410002F23RikQ3TE80 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
2410002F23RikQ3TE80 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
2410002F23RikQ3TE80 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
2410002F23RikQ3TE80 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.6■■□□□ 1.85
2410002F23RikQ3TE80 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
2410002F23RikQ3TE80 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
2410002F23RikQ3TE80 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.55■■□□□ 1.84
2410002F23RikQ3TE80 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
2410002F23RikQ3TE80 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
2410002F23RikQ3TE80 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.53■■□□□ 1.84
2410002F23RikQ3TE80 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
2410002F23RikQ3TE80 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.33■■□□□ 1.81
2410002F23RikQ3TE80 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
2410002F23RikQ3TE80 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
2410002F23RikQ3TE80 Rab21-202ENSMUST00000218831 843 ntBASIC26.26■■□□□ 1.79
2410002F23RikQ3TE80 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
2410002F23RikQ3TE80 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
2410002F23RikQ3TE80 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.19■■□□□ 1.78
2410002F23RikQ3TE80 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.14■■□□□ 1.78
2410002F23RikQ3TE80 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
2410002F23RikQ3TE80 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
2410002F23RikQ3TE80 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
2410002F23RikQ3TE80 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
2410002F23RikQ3TE80 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
2410002F23RikQ3TE80 Gm25262-201ENSMUST00000174934 133 ntBASIC26.04■■□□□ 1.76
2410002F23RikQ3TE80 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.03■■□□□ 1.76
2410002F23RikQ3TE80 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
2410002F23RikQ3TE80 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
2410002F23RikQ3TE80 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
2410002F23RikQ3TE80 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
2410002F23RikQ3TE80 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms