Protein–RNA interactions for Protein: Q9CR20

Ier3ip1, Immediate early response 3-interacting protein 1, mousemouse

Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ier3ip1Q9CR20 Gm25239-201ENSMUST00000174915 86 ntBASIC31.93■■■□□ 2.7
Ier3ip1Q9CR20 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Ier3ip1Q9CR20 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ier3ip1Q9CR20 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
Ier3ip1Q9CR20 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Ier3ip1Q9CR20 Psd-208ENSMUST00000224556 2034 ntBASIC28.91■■■□□ 2.22
Ier3ip1Q9CR20 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Ier3ip1Q9CR20 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Ier3ip1Q9CR20 Gm15042-201ENSMUST00000120212 883 ntBASIC28.55■■■□□ 2.16
Ier3ip1Q9CR20 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ier3ip1Q9CR20 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ier3ip1Q9CR20 Gm15045-201ENSMUST00000117359 883 ntBASIC28.02■■■□□ 2.08
Ier3ip1Q9CR20 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Ier3ip1Q9CR20 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.92■■■□□ 2.06
Ier3ip1Q9CR20 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Ier3ip1Q9CR20 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ier3ip1Q9CR20 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Ier3ip1Q9CR20 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Ier3ip1Q9CR20 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Ier3ip1Q9CR20 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Ier3ip1Q9CR20 Gm24109-201ENSMUST00000175489 103 ntBASIC27.37■■□□□ 1.97
Ier3ip1Q9CR20 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ier3ip1Q9CR20 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ier3ip1Q9CR20 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ier3ip1Q9CR20 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ier3ip1Q9CR20 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
Ier3ip1Q9CR20 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.1■■□□□ 1.93
Ier3ip1Q9CR20 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ier3ip1Q9CR20 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ier3ip1Q9CR20 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.91■■□□□ 1.9
Ier3ip1Q9CR20 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ier3ip1Q9CR20 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ier3ip1Q9CR20 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ier3ip1Q9CR20 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ier3ip1Q9CR20 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ier3ip1Q9CR20 Gm23366-201ENSMUST00000175022 89 ntBASIC26.75■■□□□ 1.87
Ier3ip1Q9CR20 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ier3ip1Q9CR20 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ier3ip1Q9CR20 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Ier3ip1Q9CR20 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ier3ip1Q9CR20 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Ier3ip1Q9CR20 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.52■■□□□ 1.84
Ier3ip1Q9CR20 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Ier3ip1Q9CR20 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.41■■□□□ 1.82
Ier3ip1Q9CR20 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.38■■□□□ 1.81
Ier3ip1Q9CR20 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ier3ip1Q9CR20 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ier3ip1Q9CR20 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.26■■□□□ 1.79
Ier3ip1Q9CR20 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Ier3ip1Q9CR20 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Ier3ip1Q9CR20 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ier3ip1Q9CR20 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ier3ip1Q9CR20 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.93■■□□□ 1.74
Ier3ip1Q9CR20 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ier3ip1Q9CR20 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ier3ip1Q9CR20 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.74■■□□□ 1.71
Ier3ip1Q9CR20 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ier3ip1Q9CR20 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ier3ip1Q9CR20 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ier3ip1Q9CR20 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ier3ip1Q9CR20 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.59■■□□□ 1.69
Ier3ip1Q9CR20 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ier3ip1Q9CR20 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ier3ip1Q9CR20 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ier3ip1Q9CR20 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
Ier3ip1Q9CR20 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Ier3ip1Q9CR20 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Ier3ip1Q9CR20 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ier3ip1Q9CR20 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.45■■□□□ 1.66
Ier3ip1Q9CR20 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Ier3ip1Q9CR20 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ier3ip1Q9CR20 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ier3ip1Q9CR20 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ier3ip1Q9CR20 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.27■■□□□ 1.64
Ier3ip1Q9CR20 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ier3ip1Q9CR20 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.26■■□□□ 1.63
Ier3ip1Q9CR20 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ier3ip1Q9CR20 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ier3ip1Q9CR20 Gm27325-201ENSMUST00000175467 74 ntBASIC25.14■■□□□ 1.62
Ier3ip1Q9CR20 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ier3ip1Q9CR20 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ier3ip1Q9CR20 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ier3ip1Q9CR20 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Ier3ip1Q9CR20 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ier3ip1Q9CR20 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ier3ip1Q9CR20 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ier3ip1Q9CR20 Gm25238-201ENSMUST00000174914 89 ntBASIC25■■□□□ 1.59
Ier3ip1Q9CR20 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ier3ip1Q9CR20 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Ier3ip1Q9CR20 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ier3ip1Q9CR20 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Ier3ip1Q9CR20 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.9■■□□□ 1.58
Ier3ip1Q9CR20 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Ier3ip1Q9CR20 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.89■■□□□ 1.58
Ier3ip1Q9CR20 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Ier3ip1Q9CR20 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ier3ip1Q9CR20 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ier3ip1Q9CR20 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ier3ip1Q9CR20 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.83■■□□□ 1.57
Ier3ip1Q9CR20 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.82■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms