Protein–RNA interactions for Protein: Q9WU39

Scnn1g, Amiloride-sensitive sodium channel subunit gamma, mousemouse

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1gQ9WU39 Gm25239-201ENSMUST00000174915 86 ntBASIC39.43■■■■□ 3.9
Scnn1gQ9WU39 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
Scnn1gQ9WU39 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
Scnn1gQ9WU39 Gm24109-201ENSMUST00000175489 103 ntBASIC34.31■■■■□ 3.08
Scnn1gQ9WU39 Gm15042-201ENSMUST00000120212 883 ntBASIC34.22■■■■□ 3.07
Scnn1gQ9WU39 Gm15045-201ENSMUST00000117359 883 ntBASIC33.38■■■□□ 2.93
Scnn1gQ9WU39 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Scnn1gQ9WU39 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
Scnn1gQ9WU39 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
Scnn1gQ9WU39 Gm23366-201ENSMUST00000175022 89 ntBASIC32.91■■■□□ 2.86
Scnn1gQ9WU39 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Scnn1gQ9WU39 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Scnn1gQ9WU39 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.1■■■□□ 2.73
Scnn1gQ9WU39 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Scnn1gQ9WU39 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Scnn1gQ9WU39 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.81■■■□□ 2.68
Scnn1gQ9WU39 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.79■■■□□ 2.68
Scnn1gQ9WU39 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Scnn1gQ9WU39 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
Scnn1gQ9WU39 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
Scnn1gQ9WU39 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Scnn1gQ9WU39 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Scnn1gQ9WU39 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Scnn1gQ9WU39 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Scnn1gQ9WU39 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.22■■■□□ 2.59
Scnn1gQ9WU39 Gm25238-201ENSMUST00000174914 89 ntBASIC31.19■■■□□ 2.58
Scnn1gQ9WU39 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Scnn1gQ9WU39 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.05■■■□□ 2.56
Scnn1gQ9WU39 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Scnn1gQ9WU39 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Scnn1gQ9WU39 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
Scnn1gQ9WU39 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Scnn1gQ9WU39 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.55■■■□□ 2.48
Scnn1gQ9WU39 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Scnn1gQ9WU39 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.45■■■□□ 2.46
Scnn1gQ9WU39 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Scnn1gQ9WU39 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.27■■■□□ 2.44
Scnn1gQ9WU39 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
Scnn1gQ9WU39 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Scnn1gQ9WU39 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Scnn1gQ9WU39 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.15■■■□□ 2.42
Scnn1gQ9WU39 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Scnn1gQ9WU39 Gm25262-201ENSMUST00000174934 133 ntBASIC30.03■■■□□ 2.4
Scnn1gQ9WU39 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.95■■■□□ 2.39
Scnn1gQ9WU39 Gm27325-201ENSMUST00000175467 74 ntBASIC29.92■■■□□ 2.38
Scnn1gQ9WU39 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.8■■■□□ 2.36
Scnn1gQ9WU39 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Scnn1gQ9WU39 Psd-208ENSMUST00000224556 2034 ntBASIC29.68■■■□□ 2.34
Scnn1gQ9WU39 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Scnn1gQ9WU39 Rab21-202ENSMUST00000218831 843 ntBASIC29.55■■■□□ 2.32
Scnn1gQ9WU39 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.53■■■□□ 2.32
Scnn1gQ9WU39 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.51■■■□□ 2.31
Scnn1gQ9WU39 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.51■■■□□ 2.31
Scnn1gQ9WU39 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Scnn1gQ9WU39 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Scnn1gQ9WU39 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
Scnn1gQ9WU39 Gm26115-201ENSMUST00000175605 87 ntBASIC29.39■■■□□ 2.3
Scnn1gQ9WU39 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Scnn1gQ9WU39 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.35■■■□□ 2.29
Scnn1gQ9WU39 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.24■■■□□ 2.27
Scnn1gQ9WU39 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.24■■■□□ 2.27
Scnn1gQ9WU39 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Scnn1gQ9WU39 Gm8109-201ENSMUST00000194076 746 ntBASIC29.21■■■□□ 2.27
Scnn1gQ9WU39 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Scnn1gQ9WU39 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Scnn1gQ9WU39 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.15■■■□□ 2.26
Scnn1gQ9WU39 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
Scnn1gQ9WU39 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Scnn1gQ9WU39 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.09■■■□□ 2.25
Scnn1gQ9WU39 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Scnn1gQ9WU39 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Scnn1gQ9WU39 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Scnn1gQ9WU39 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
Scnn1gQ9WU39 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.94■■■□□ 2.22
Scnn1gQ9WU39 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Scnn1gQ9WU39 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.9■■■□□ 2.22
Scnn1gQ9WU39 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Scnn1gQ9WU39 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.87■■■□□ 2.21
Scnn1gQ9WU39 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Scnn1gQ9WU39 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Scnn1gQ9WU39 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Scnn1gQ9WU39 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Scnn1gQ9WU39 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Scnn1gQ9WU39 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
Scnn1gQ9WU39 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Scnn1gQ9WU39 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Scnn1gQ9WU39 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Scnn1gQ9WU39 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.57■■■□□ 2.16
Scnn1gQ9WU39 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.54■■■□□ 2.16
Scnn1gQ9WU39 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.53■■■□□ 2.16
Scnn1gQ9WU39 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.45■■■□□ 2.14
Scnn1gQ9WU39 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
Scnn1gQ9WU39 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Scnn1gQ9WU39 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Scnn1gQ9WU39 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.37■■■□□ 2.13
Scnn1gQ9WU39 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Scnn1gQ9WU39 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
Scnn1gQ9WU39 Gm27322-201ENSMUST00000184007 104 ntBASIC28.31■■■□□ 2.12
Scnn1gQ9WU39 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Scnn1gQ9WU39 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms