RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 YHR078WP38799 552 aa0.75□□□□□ -2.29
snR47snR47 REV7P38927 245 aa0.75□□□□□ -2.29
snR47snR47 SAH1P39954 449 aaKnown RBP0.75□□□□□ -2.29
snR47snR47 VHR1P40522 640 aa0.75□□□□□ -2.29
snR47snR47 FHN1P53279 174 aa0.75□□□□□ -2.29
snR47snR47 NRG1Q03125 231 aa0.75□□□□□ -2.29
snR47snR47 YPL066WQ12194 479 aa0.75□□□□□ -2.29
snR47snR47 YKL033W-AQ86ZR7 236 aa0.75□□□□□ -2.29
snR47snR47 GCR1P07261 785 aa0.74□□□□□ -2.29
snR47snR47 BEM3P32873 1128 aa0.74□□□□□ -2.29
snR47snR47 EXO84P38261 753 aa0.74□□□□□ -2.29
snR47snR47 ERP5P38819 212 aa0.74□□□□□ -2.29
snR47snR47 YIL108WP40483 696 aaKnown RBP0.74□□□□□ -2.29
snR47snR47 MRPS18P42847 217 aa0.74□□□□□ -2.29
snR47snR47 PKH1Q03407 766 aa0.74□□□□□ -2.29
snR47snR47 RTT103Q05543 409 aa0.74□□□□□ -2.29
snR47snR47 BSC6Q08280 497 aa0.74□□□□□ -2.29
snR47snR47 SRL1Q08673 210 aa0.74□□□□□ -2.29
snR47snR47 BUD7Q08754 746 aa0.74□□□□□ -2.29
snR47snR47 TGL5Q12043 749 aa0.74□□□□□ -2.29
snR47snR47 FRE7Q12333 620 aa0.74□□□□□ -2.29
snR47snR47 FUB1P25659 250 aa0.73□□□□□ -2.29
snR47snR47 RPD3P32561 433 aa0.73□□□□□ -2.29
snR47snR47 PIN4P34217 668 aaKnown RBP RIP-Chip data0.73□□□□□ -2.29not detected
snR47snR47 YMC2P38087 329 aa0.73□□□□□ -2.29
snR47snR47 MIT1P40002 666 aa0.73□□□□□ -2.29
snR47snR47 UBP7P40453 1071 aa0.73□□□□□ -2.29
snR47snR47 HXT16P47185 567 aa0.73□□□□□ -2.29
snR47snR47 ORM2Q06144 216 aa0.73□□□□□ -2.29
snR47snR47 YPR196WQ06595 470 aa0.73□□□□□ -2.29
snR47snR47 IRC3Q06683 689 aa0.73□□□□□ -2.29
snR47snR47 ULA1Q12059 462 aa0.73□□□□□ -2.29
snR47snR47 YLR415CO13578 112 aa0.72□□□□□ -2.29
snR47snR47 MET4P32389 672 aa0.72□□□□□ -2.29
snR47snR47 GMH1P36125 273 aa0.72□□□□□ -2.29
snR47snR47 SIC1P38634 284 aa0.72□□□□□ -2.29
snR47snR47 CCT3P39077 534 aaKnown RBP0.72□□□□□ -2.29
snR47snR47 OAF1P39720 1047 aaPredicted RBP0.72□□□□□ -2.29
snR47snR47 PIP2P52960 996 aa0.72□□□□□ -2.29
snR47snR47 PAN2P53010 1115 aaPredicted RBP0.72□□□□□ -2.29
snR47snR47 ERG13P54839 491 aaKnown RBP0.72□□□□□ -2.29
snR47snR47 VPS30Q02948 557 aa0.72□□□□□ -2.29
snR47snR47 RKM4Q12504 494 aa0.72□□□□□ -2.29
snR47snR47 PHO5P00635 467 aa0.71□□□□□ -2.3
snR47snR47 STE12P13574 688 aa0.71□□□□□ -2.3
snR47snR47 TSR4P25040 408 aa0.71□□□□□ -2.3
snR47snR47 CDC48P25694 835 aaKnown RBP0.71□□□□□ -2.3
snR47snR47 NGG1P32494 702 aa0.71□□□□□ -2.3
snR47snR47 PMC1P38929 1173 aaPredicted RBP0.71□□□□□ -2.3
snR47snR47 JHD1P40034 492 aa0.71□□□□□ -2.3
snR47snR47 AZF1P41696 914 aa0.71□□□□□ -2.3
snR47snR47 SKP2P42843 763 aa0.71□□□□□ -2.3
snR47snR47 NMD5P46970 1048 aa0.71□□□□□ -2.3
snR47snR47 YGR122WP53272 402 aa0.71□□□□□ -2.3
snR47snR47 APJ1P53940 528 aa0.71□□□□□ -2.3
snR47snR47 YKR011CQ02209 353 aa0.71□□□□□ -2.3
snR47snR47 MUS81Q04149 632 aaPredicted RBP0.71□□□□□ -2.3
snR47snR47 AI5_ALPHAQ9ZZX1 630 aa0.71□□□□□ -2.3
snR47snR47 TUP1P16649 713 aa0.7□□□□□ -2.3
snR47snR47 KCC4P25389 1037 aa0.7□□□□□ -2.3
snR47snR47 LYP1P32487 611 aa0.7□□□□□ -2.3
snR47snR47 TYE7P33122 291 aaPredicted RBP0.7□□□□□ -2.3
snR47snR47 TIF3P34167 436 aaKnown RBP0.7□□□□□ -2.3
snR47snR47 PHO11P35842 467 aa0.7□□□□□ -2.3
snR47snR47 PCA1P38360 1216 aa0.7□□□□□ -2.3
snR47snR47 PHO12P38693 467 aa0.7□□□□□ -2.3
snR47snR47 SFB3P38810 929 aa0.7□□□□□ -2.3
snR47snR47 YGL260WP53056 76 aa0.7□□□□□ -2.3
snR47snR47 HDA1P53973 706 aa0.7□□□□□ -2.3
snR47snR47 SRP1Q02821 542 aaKnown RBP0.7□□□□□ -2.3
snR47snR47 YBL113CQ7M4S9 792 aa0.7□□□□□ -2.3
snR47snR47 YPT1P01123 206 aaKnown RBP0.69□□□□□ -2.3
snR47snR47 RAD2P07276 1031 aa0.69□□□□□ -2.3
snR47snR47 ASN1P49089 572 aaKnown RBP0.69□□□□□ -2.3
snR47snR47 TEX1P53851 422 aaKnown RBP0.69□□□□□ -2.3
snR47snR47 RSC9Q03124 581 aa0.69□□□□□ -2.3
snR47snR47 PRS5Q12265 496 aaKnown RBP0.69□□□□□ -2.3
snR47snR47 YPR089WO13585 888 aa0.68□□□□□ -2.3
snR47snR47 TRP2P00899 507 aaKnown RBP0.68□□□□□ -2.3
snR47snR47 INO1P11986 533 aa0.68□□□□□ -2.3
snR47snR47 THR1P17423 357 aaKnown RBP0.68□□□□□ -2.3
snR47snR47 CLN2P20438 545 aa0.68□□□□□ -2.3
snR47snR47 RAD27P26793 382 aa0.68□□□□□ -2.3
snR47snR47 MGM1P32266 881 aa0.68□□□□□ -2.3
snR47snR47 ATO2P32907 282 aa0.68□□□□□ -2.3
snR47snR47 YEL1P34225 687 aa0.68□□□□□ -2.3
snR47snR47 YKL107WP34251 309 aa0.68□□□□□ -2.3
snR47snR47 SET3P36124 751 aa0.68□□□□□ -2.3
snR47snR47 RTT107P38850 1070 aa0.68□□□□□ -2.3
snR47snR47 SNO3P43544 222 aa0.68□□□□□ -2.3
snR47snR47 DUS1P53759 423 aaKnown RBP0.68□□□□□ -2.3
snR47snR47 ARG7Q04728 441 aa0.68□□□□□ -2.3
snR47snR47 RTT10Q08924 1013 aa0.68□□□□□ -2.3
snR47snR47 YMR230W-AQ3E7B5 62 aa0.68□□□□□ -2.3
snR47snR47 CYC8P14922 966 aa0.67□□□□□ -2.3
snR47snR47 MOT2P34909 587 aaKnown RBP0.67□□□□□ -2.3
snR47snR47 FMO1P38866 432 aa0.67□□□□□ -2.3
snR47snR47 PZF1P39933 429 aa0.67□□□□□ -2.3
snR47snR47 PFA3P42836 336 aa0.67□□□□□ -2.3
snR47snR47 ATP23P53722 227 aa0.67□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 46 ms