RNA–Protein interactions for RNA: YPR046W

MCM16, Transcript of Component of the Ctf19 complex and the COMA subcomplex, yeast

Gene MCM16, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCM16	YPR046W	RET2	P43621	546 aa		4.61	□□□□□ -1.67
MCM16	YPR046W	NOG2	P53742	486 aa	Known RBP	4.61	□□□□□ -1.67
MCM16	YPR046W	ENA2	Q01896	1091 aa		4.61	□□□□□ -1.67
MCM16	YPR046W	ECM9	Q02202	377 aa		4.61	□□□□□ -1.67
MCM16	YPR046W	SRT1	Q03175	343 aa		4.61	□□□□□ -1.67
MCM16	YPR046W	PHM6	Q05637	104 aa		4.61	□□□□□ -1.67
MCM16	YPR046W	COG4	Q06096	861 aa		4.61	□□□□□ -1.67
MCM16	YPR046W	ENA5	Q12691	1091 aa		4.61	□□□□□ -1.67
MCM16	YPR046W	BI4	P03879	638 aa		4.6	□□□□□ -1.67
MCM16	YPR046W	FUN30	P31380	1131 aa		4.6	□□□□□ -1.67
MCM16	YPR046W	CCR4	P31384	837 aa	Known RBP	4.6	□□□□□ -1.67
MCM16	YPR046W	RPC82	P32349	654 aa		4.6	□□□□□ -1.67
MCM16	YPR046W	TDA3	P38758	523 aa		4.6	□□□□□ -1.67
MCM16	YPR046W	RRP8	P38961	392 aa	Known RBP	4.6	□□□□□ -1.67
MCM16	YPR046W	GIP4	P39732	760 aa		4.6	□□□□□ -1.67
MCM16	YPR046W	VID27	P40157	782 aa		4.6	□□□□□ -1.67
MCM16	YPR046W	RRT14	P40470	206 aa		4.6	□□□□□ -1.67
MCM16	YPR046W	HIS6	P40545	261 aa		4.6	□□□□□ -1.67
MCM16	YPR046W	RSC8	P43609	557 aa	Known RBP	4.6	□□□□□ -1.67
MCM16	YPR046W	ALY2	P47029	1046 aa		4.6	□□□□□ -1.67
MCM16	YPR046W	YGR153W	P48238	217 aa		4.6	□□□□□ -1.67
MCM16	YPR046W	TAN1	P53072	289 aa	Predicted RBP	4.6	□□□□□ -1.67
MCM16	YPR046W	SKY1	Q03656	742 aa		4.6	□□□□□ -1.67
MCM16	YPR046W	PUS7	Q08647	676 aa	Known RBP	4.6	□□□□□ -1.67
MCM16	YPR046W	LPX1	Q12405	387 aa	Known RBP	4.6	□□□□□ -1.67
MCM16	YPR046W	COQ4	O13525	335 aa		4.59	□□□□□ -1.67
MCM16	YPR046W	DAL7	P21826	554 aa		4.59	□□□□□ -1.67
MCM16	YPR046W	DAL3	P32459	195 aa		4.59	□□□□□ -1.67
MCM16	YPR046W	YHL041W	P38730	149 aa		4.59	□□□□□ -1.67
MCM16	YPR046W	GIC1	P38785	314 aa		4.59	□□□□□ -1.67
MCM16	YPR046W	NMD3	P38861	518 aa	Known RBP	4.59	□□□□□ -1.67
MCM16	YPR046W	PIK1	P39104	1066 aa		4.59	□□□□□ -1.67
MCM16	YPR046W	NOC2	P39744	710 aa	Known RBP	4.59	□□□□□ -1.67
MCM16	YPR046W	VPS27	P40343	622 aa	Known RBP	4.59	□□□□□ -1.67
MCM16	YPR046W	RLP7	P40693	322 aa	Known RBP	4.59	□□□□□ -1.67
MCM16	YPR046W	GTS1	P40956	396 aa		4.59	□□□□□ -1.67
MCM16	YPR046W	YFL054C	P43549	646 aa		4.59	□□□□□ -1.67
MCM16	YPR046W	HXT16	P47185	567 aa		4.59	□□□□□ -1.67
MCM16	YPR046W	TPP1	Q03796	238 aa		4.59	□□□□□ -1.67
MCM16	YPR046W	PFK1	P16861	987 aa	Known RBP	4.58	□□□□□ -1.68
MCM16	YPR046W	COX11	P19516	300 aa	Known RBP	4.58	□□□□□ -1.68
MCM16	YPR046W	PRP6	P19735	899 aa	Predicted RBP	4.58	□□□□□ -1.68
MCM16	YPR046W	RFA1	P22336	621 aa	Known RBP	4.58	□□□□□ -1.68
MCM16	YPR046W	SSH4	P32343	579 aa		4.58	□□□□□ -1.68
MCM16	YPR046W	RPN12	P32496	274 aa		4.58	□□□□□ -1.68
MCM16	YPR046W	MFT1	P33441	392 aa	Known RBP	4.58	□□□□□ -1.68
MCM16	YPR046W	THI80	P35202	319 aa		4.58	□□□□□ -1.68
MCM16	YPR046W	TAF1	P46677	1066 aa		4.58	□□□□□ -1.68
MCM16	YPR046W	TAD1	P53065	400 aa		4.58	□□□□□ -1.68
MCM16	YPR046W	YPR196W	Q06595	470 aa		4.58	□□□□□ -1.68
MCM16	YPR046W	DIF1	O13577	133 aa		4.57	□□□□□ -1.68
MCM16	YPR046W	CYS3	P31373	394 aa	Known RBP	4.57	□□□□□ -1.68
MCM16	YPR046W	CCZ1	P38273	704 aa		4.57	□□□□□ -1.68
MCM16	YPR046W	NPP2	P39997	493 aa		4.57	□□□□□ -1.68
MCM16	YPR046W	FOL2	P51601	243 aa	Known RBP	4.57	□□□□□ -1.68
MCM16	YPR046W	MRPL22	P53881	309 aa		4.57	□□□□□ -1.68
MCM16	YPR046W	PTA1	Q01329	785 aa	Predicted RBP	4.57	□□□□□ -1.68
MCM16	YPR046W	BRE1	Q07457	700 aa	Known RBP	4.57	□□□□□ -1.68
MCM16	YPR046W	PEX15	Q08215	383 aa		4.57	□□□□□ -1.68
MCM16	YPR046W	HFI1	Q12060	488 aa		4.57	□□□□□ -1.68
MCM16	YPR046W	OSW2	Q12202	724 aa		4.57	□□□□□ -1.68
MCM16	YPR046W	YBR182C-A	Q8TGU6	64 aa		4.57	□□□□□ -1.68
MCM16	YPR046W	ACE2	P21192	770 aa		4.56	□□□□□ -1.68
MCM16	YPR046W	MIH1	P23748	554 aa		4.56	□□□□□ -1.68
MCM16	YPR046W	SRO9	P25567	434 aa	Known RBP	4.56	□□□□□ -1.68
MCM16	YPR046W	YKU70	P32807	602 aa		4.56	□□□□□ -1.68
MCM16	YPR046W	AIM3	P38266	947 aa	Known RBP	4.56	□□□□□ -1.68
MCM16	YPR046W	HXT6	P39003	570 aa	Known RBP	4.56	□□□□□ -1.68
MCM16	YPR046W	HXT7	P39004	570 aa		4.56	□□□□□ -1.68
MCM16	YPR046W	ACA1	P39970	489 aa		4.56	□□□□□ -1.68
MCM16	YPR046W	UBC9	P50623	157 aa	Predicted RBP	4.56	□□□□□ -1.68
MCM16	YPR046W	NPY1	P53164	384 aa		4.56	□□□□□ -1.68
MCM16	YPR046W	SFB2	P53953	876 aa		4.56	□□□□□ -1.68
MCM16	YPR046W	YHM2	Q04013	314 aa		4.56	□□□□□ -1.68
MCM16	YPR046W	RCL1	Q08096	367 aa	Predicted RBP	4.56	□□□□□ -1.68
MCM16	YPR046W	YPR027C	Q12079	277 aa		4.56	□□□□□ -1.68
MCM16	YPR046W	APM4	Q99186	491 aa		4.56	□□□□□ -1.68
MCM16	YPR046W	YCL002C	P25565	263 aa		4.55	□□□□□ -1.68
MCM16	YPR046W	DBF20	P32328	564 aa		4.55	□□□□□ -1.68
MCM16	YPR046W	KTR4	P38131	464 aa		4.55	□□□□□ -1.68
MCM16	YPR046W	MAL31	P38156	614 aa		4.55	□□□□□ -1.68
MCM16	YPR046W	EXO84	P38261	753 aa		4.55	□□□□□ -1.68
MCM16	YPR046W	SHR5	P41912	237 aa		4.55	□□□□□ -1.68
MCM16	YPR046W	RIM8	P53179	542 aa		4.55	□□□□□ -1.68
MCM16	YPR046W	ENV11	P53246	860 aa		4.55	□□□□□ -1.68
MCM16	YPR046W	CNM67	P53865	581 aa	Known RBP	4.55	□□□□□ -1.68
MCM16	YPR046W	VPS30	Q02948	557 aa		4.55	□□□□□ -1.68
MCM16	YPR046W	LRS4	Q04087	347 aa	Known RBP	4.55	□□□□□ -1.68
MCM16	YPR046W	RSB1	Q08417	382 aa		4.55	□□□□□ -1.68
MCM16	YPR046W	RPS9A	O13516	197 aa	Known RBP	4.54	□□□□□ -1.68
MCM16	YPR046W	NOT3	P06102	836 aa	Known RBP	4.54	□□□□□ -1.68
MCM16	YPR046W	RPS21A	P0C0V8	87 aa	Known RBP	4.54	□□□□□ -1.68
MCM16	YPR046W	PHO81	P17442	1178 aa		4.54	□□□□□ -1.68
MCM16	YPR046W	URA1	P28272	314 aa	Predicted RBP	4.54	□□□□□ -1.68
MCM16	YPR046W	MDL2	P33311	773 aa		4.54	□□□□□ -1.68
MCM16	YPR046W	SAP190	P36123	1033 aa		4.54	□□□□□ -1.68
MCM16	YPR046W	FLR1	P38124	548 aa		4.54	□□□□□ -1.68
MCM16	YPR046W	ECM21	P38167	1117 aa	Known RBP	4.54	□□□□□ -1.68
MCM16	YPR046W	YHL012W	P38709	493 aa		4.54	□□□□□ -1.68
MCM16	YPR046W	ETP1	P38748	585 aa	Known RBP	4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms