RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W KAR1P11927 433 aa3.94□□□□□ -1.78
SRL1YOR247W PWP2P25635 923 aaKnown RBP3.94□□□□□ -1.78
SRL1YOR247W CCR4P31384 837 aaKnown RBP3.94□□□□□ -1.78
SRL1YOR247W PLC1P32383 869 aa3.94□□□□□ -1.78
SRL1YOR247W HIR1P32479 840 aa3.94□□□□□ -1.78
SRL1YOR247W ATG19P35193 415 aa3.94□□□□□ -1.78
SRL1YOR247W MAL31P38156 614 aa3.94□□□□□ -1.78
SRL1YOR247W EMP65P40085 556 aa3.94□□□□□ -1.78
SRL1YOR247W CCT5P40413 562 aaKnown RBP3.94□□□□□ -1.78
SRL1YOR247W YGR012WP53206 393 aa3.94□□□□□ -1.78
SRL1YOR247W CEF1Q03654 590 aaPredicted RBP3.94□□□□□ -1.78
SRL1YOR247W SSY1Q03770 852 aa3.94□□□□□ -1.78
SRL1YOR247W SIZ1Q04195 904 aa3.94□□□□□ -1.78
SRL1YOR247W CRR1Q05790 422 aa3.94□□□□□ -1.78
SRL1YOR247W RPN7Q06103 429 aaKnown RBP3.94□□□□□ -1.78
SRL1YOR247W XYL2Q07993 356 aa3.94□□□□□ -1.78
SRL1YOR247W YOR378WQ08902 515 aa3.94□□□□□ -1.78
SRL1YOR247W RPP2AP05319 106 aaKnown RBP3.93□□□□□ -1.78
SRL1YOR247W YEF3P16521 1044 aaKnown RBP3.93□□□□□ -1.78
SRL1YOR247W SRP101P32916 621 aa3.93□□□□□ -1.78
SRL1YOR247W TFC4P33339 1025 aa3.93□□□□□ -1.78
SRL1YOR247W HSP78P33416 811 aa3.93□□□□□ -1.78
SRL1YOR247W VPS24P36095 224 aaKnown RBP3.93□□□□□ -1.78
SRL1YOR247W TRZ1P36159 838 aaPredicted RBP3.93□□□□□ -1.78
SRL1YOR247W POL12P38121 705 aaPredicted RBP3.93□□□□□ -1.78
SRL1YOR247W PMC1P38929 1173 aaPredicted RBP3.93□□□□□ -1.78
SRL1YOR247W ZRG8P40021 1076 aa3.93□□□□□ -1.78
SRL1YOR247W YIL108WP40483 696 aaKnown RBP3.93□□□□□ -1.78
SRL1YOR247W BNA2P47125 453 aa3.93□□□□□ -1.78
SRL1YOR247W UBC9P50623 157 aaPredicted RBP3.93□□□□□ -1.78
SRL1YOR247W SLD3P53135 668 aa3.93□□□□□ -1.78
SRL1YOR247W ORC3P54790 616 aa3.93□□□□□ -1.78
SRL1YOR247W PTA1Q01329 785 aaPredicted RBP3.93□□□□□ -1.78
SRL1YOR247W VPS72Q03388 795 aa3.93□□□□□ -1.78
SRL1YOR247W YDR338CQ05497 695 aa3.93□□□□□ -1.78
SRL1YOR247W YOR022CQ12204 715 aa3.93□□□□□ -1.78
SRL1YOR247W SST2P11972 698 aaKnown RBP3.92□□□□□ -1.78
SRL1YOR247W POA1P38218 177 aa3.92□□□□□ -1.78
SRL1YOR247W BIT2P38346 545 aa3.92□□□□□ -1.78
SRL1YOR247W GPP2P40106 250 aaKnown RBP3.92□□□□□ -1.78
SRL1YOR247W IRC24P40580 263 aa3.92□□□□□ -1.78
SRL1YOR247W NIT2P47016 307 aa3.92□□□□□ -1.78
SRL1YOR247W AVT1P47082 602 aa3.92□□□□□ -1.78
SRL1YOR247W TAN1P53072 289 aaPredicted RBP3.92□□□□□ -1.78
SRL1YOR247W SPC105P53148 917 aa3.92□□□□□ -1.78
SRL1YOR247W PBP1P53297 722 aaKnown RBP3.92□□□□□ -1.78
SRL1YOR247W ECM9Q02202 377 aa3.92□□□□□ -1.78
SRL1YOR247W YOR352WQ08816 343 aa3.92□□□□□ -1.78
SRL1YOR247W THI21Q08975 551 aa3.92□□□□□ -1.78
SRL1YOR247W DFG16Q99234 619 aa3.92□□□□□ -1.78
SRL1YOR247W RPD3P32561 433 aa3.91□□□□□ -1.78
SRL1YOR247W YKL133CP36066 463 aa3.91□□□□□ -1.78
SRL1YOR247W YKR018CP36114 725 aa3.91□□□□□ -1.78
SRL1YOR247W RIM4P38741 713 aa3.91□□□□□ -1.78
SRL1YOR247W NAB3P38996 802 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
SRL1YOR247W ZIP2P53061 704 aa3.91□□□□□ -1.78
SRL1YOR247W DUS1P53759 423 aaKnown RBP3.91□□□□□ -1.78
SRL1YOR247W TGL2P54857 326 aa3.91□□□□□ -1.78
SRL1YOR247W GPD1Q00055 391 aaKnown RBP3.91□□□□□ -1.78
SRL1YOR247W SKY1Q03656 742 aa3.91□□□□□ -1.78
SRL1YOR247W CDA1Q06702 301 aa3.91□□□□□ -1.78
SRL1YOR247W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
SRL1YOR247W HAL9Q12180 1030 aa3.91□□□□□ -1.78
SRL1YOR247W MPD2Q99316 277 aa3.91□□□□□ -1.78
SRL1YOR247W CMP2P14747 604 aa3.9□□□□□ -1.79
SRL1YOR247W MIH1P23748 554 aa3.9□□□□□ -1.79
SRL1YOR247W ELM1P32801 640 aa3.9□□□□□ -1.79
SRL1YOR247W NIC96P34077 839 aa3.9□□□□□ -1.79
SRL1YOR247W YKR051WP36142 418 aa3.9□□□□□ -1.79
SRL1YOR247W YKR075CP36155 307 aa3.9□□□□□ -1.79
SRL1YOR247W ABZ1P37254 787 aaPredicted RBP3.9□□□□□ -1.79
SRL1YOR247W FLR1P38124 548 aa3.9□□□□□ -1.79
SRL1YOR247W PIP2P52960 996 aa3.9□□□□□ -1.79
SRL1YOR247W PRP43P53131 767 aaKnown RBP3.9□□□□□ -1.79
SRL1YOR247W PAP2P53632 584 aaKnown RBP3.9□□□□□ -1.79
SRL1YOR247W YNL034WP53963 612 aa3.9□□□□□ -1.79
SRL1YOR247W YNL018CP53976 612 aa3.9□□□□□ -1.79
SRL1YOR247W ATG16Q03818 150 aa3.9□□□□□ -1.79
SRL1YOR247W YHM2Q04013 314 aa3.9□□□□□ -1.79
SRL1YOR247W PHM6Q05637 104 aa3.9□□□□□ -1.79
SRL1YOR247W YPR027CQ12079 277 aa3.9□□□□□ -1.79
SRL1YOR247W PTP2P29461 750 aa3.89□□□□□ -1.79
SRL1YOR247W PTH2P34222 208 aa3.89□□□□□ -1.79
SRL1YOR247W MNN4P36044 1178 aa3.89□□□□□ -1.79
SRL1YOR247W PCL10P53124 433 aa3.89□□□□□ -1.79
SRL1YOR247W ORC4P54791 529 aa3.89□□□□□ -1.79
SRL1YOR247W MET14Q02196 202 aa3.89□□□□□ -1.79
SRL1YOR247W SSL1Q04673 461 aaPredicted RBP3.89□□□□□ -1.79
SRL1YOR247W RIB2Q12362 591 aaKnown RBP3.89□□□□□ -1.79
SRL1YOR247W LPX1Q12405 387 aaKnown RBP3.89□□□□□ -1.79
SRL1YOR247W APM4Q99186 491 aa3.89□□□□□ -1.79
SRL1YOR247W CYC1P00044 109 aaPredicted RBP3.88□□□□□ -1.79
SRL1YOR247W SPE1P08432 466 aa3.88□□□□□ -1.79
SRL1YOR247W FBP1P09201 348 aa3.88□□□□□ -1.79
SRL1YOR247W COX11P19516 300 aaKnown RBP3.88□□□□□ -1.79
SRL1YOR247W HEM12P32347 362 aaPredicted RBP3.88□□□□□ -1.79
SRL1YOR247W NGG1P32494 702 aa3.88□□□□□ -1.79
SRL1YOR247W PZF1P39933 429 aa3.88□□□□□ -1.79
SRL1YOR247W MND2P40577 368 aa3.88□□□□□ -1.79
SRL1YOR247W SSY5P47002 699 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms