RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C HXK1P04806 485 aaKnown RBP4.33□□□□□ -1.72
VHS3YOR054C MST1P07236 462 aa4.33□□□□□ -1.72
VHS3YOR054C OSM1P21375 501 aaKnown RBP4.33□□□□□ -1.72
VHS3YOR054C CNA1P23287 553 aa4.33□□□□□ -1.72
VHS3YOR054C MSH2P25847 964 aa4.33□□□□□ -1.72
VHS3YOR054C APL1P27351 700 aa4.33□□□□□ -1.72
VHS3YOR054C HCS1P34243 683 aa4.33□□□□□ -1.72
VHS3YOR054C JNM1P36224 373 aa4.33□□□□□ -1.72
VHS3YOR054C RTS1P38903 757 aa4.33□□□□□ -1.72
VHS3YOR054C COS6P53344 381 aa4.33□□□□□ -1.72
VHS3YOR054C PKH1Q03407 766 aa4.33□□□□□ -1.72
VHS3YOR054C DML1Q03652 475 aa4.33□□□□□ -1.72
VHS3YOR054C FIN1Q03898 291 aa4.33□□□□□ -1.72
VHS3YOR054C YLR287CQ05881 355 aa4.33□□□□□ -1.72
VHS3YOR054C MCP2Q06567 569 aa4.33□□□□□ -1.72
VHS3YOR054C HAT1Q12341 374 aa4.33□□□□□ -1.72
VHS3YOR054C BBP1Q12365 385 aa4.33□□□□□ -1.72
VHS3YOR054C NCA2Q12374 616 aa4.33□□□□□ -1.72
VHS3YOR054C AI4P03878 556 aa4.32□□□□□ -1.72
VHS3YOR054C SUP45P12385 437 aaKnown RBP4.32□□□□□ -1.72
VHS3YOR054C GCN3P14741 305 aa4.32□□□□□ -1.72
VHS3YOR054C VMA2P16140 517 aaKnown RBP4.32□□□□□ -1.72
VHS3YOR054C MSB1P21339 1137 aaKnown RBP4.32□□□□□ -1.72
VHS3YOR054C MRPL25P23369 157 aa4.32□□□□□ -1.72
VHS3YOR054C YJU3P28321 313 aa4.32□□□□□ -1.72
VHS3YOR054C MLS1P30952 554 aa4.32□□□□□ -1.72
VHS3YOR054C FBP26P32604 452 aa4.32□□□□□ -1.72
VHS3YOR054C GCG1P32656 232 aaKnown RBP4.32□□□□□ -1.72
VHS3YOR054C YKR015CP36111 568 aa4.32□□□□□ -1.72
VHS3YOR054C CTM1P38818 585 aa4.32□□□□□ -1.72
VHS3YOR054C PCF11P39081 626 aaPredicted RBP4.32□□□□□ -1.72
VHS3YOR054C RLP7P40693 322 aaKnown RBP4.32□□□□□ -1.72
VHS3YOR054C NOP9P47077 666 aaKnown RBP4.32□□□□□ -1.72
VHS3YOR054C YJR039WP47107 1121 aa4.32□□□□□ -1.72
VHS3YOR054C HAM1P47119 197 aaKnown RBP4.32□□□□□ -1.72
VHS3YOR054C RFX1P48743 811 aa4.32□□□□□ -1.72
VHS3YOR054C MON1P53129 644 aa4.32□□□□□ -1.72
VHS3YOR054C YDR179W-AQ03983 463 aa4.32□□□□□ -1.72
VHS3YOR054C YMR114CQ04471 368 aaKnown RBP4.32□□□□□ -1.72
VHS3YOR054C TMA64Q04600 565 aaKnown RBP4.32□□□□□ -1.72
VHS3YOR054C SOV1Q04748 898 aa4.32□□□□□ -1.72
VHS3YOR054C COA4Q05809 96 aa4.32□□□□□ -1.72
VHS3YOR054C YPR172WQ06608 200 aa4.32□□□□□ -1.72
VHS3YOR054C RPN8Q08723 338 aaKnown RBP4.32□□□□□ -1.72
VHS3YOR054C YBL113CQ7M4S9 792 aa4.32□□□□□ -1.72
VHS3YOR054C HTA1P04911 132 aaKnown RBP4.31□□□□□ -1.72
VHS3YOR054C HTA2P04912 132 aa4.31□□□□□ -1.72
VHS3YOR054C MPH3P0CE00 602 aa4.31□□□□□ -1.72
VHS3YOR054C VMA4P22203 233 aaKnown RBP4.31□□□□□ -1.72
VHS3YOR054C SPO11P23179 398 aa4.31□□□□□ -1.72
VHS3YOR054C CLB2P24869 491 aa4.31□□□□□ -1.72
VHS3YOR054C SPS22P25380 463 aa4.31□□□□□ -1.72
VHS3YOR054C GDA1P32621 518 aa4.31□□□□□ -1.72
VHS3YOR054C GYP6P32806 458 aa4.31□□□□□ -1.72
VHS3YOR054C SMC1P32908 1225 aa4.31□□□□□ -1.72
VHS3YOR054C YHR020WP38708 688 aaKnown RBP4.31□□□□□ -1.72
VHS3YOR054C PIK1P39104 1066 aa4.31□□□□□ -1.72
VHS3YOR054C FCY21P40039 528 aa4.31□□□□□ -1.72
VHS3YOR054C POL31P46957 487 aa4.31□□□□□ -1.72
VHS3YOR054C RNR4P49723 345 aaKnown RBP4.31□□□□□ -1.72
VHS3YOR054C VPS64Q03944 604 aa4.31□□□□□ -1.72
VHS3YOR054C SSQ1Q05931 657 aaPredicted RBP4.31□□□□□ -1.72
VHS3YOR054C YOL057WQ08225 711 aa4.31□□□□□ -1.72
VHS3YOR054C RTT10Q08924 1013 aa4.31□□□□□ -1.72
VHS3YOR054C NCB2Q92317 146 aa4.31□□□□□ -1.72
VHS3YOR054C RPL22AP05749 121 aaKnown RBP4.31□□□□□ -1.72
VHS3YOR054C RPS24AP0CX31 135 aaKnown RBP4.31□□□□□ -1.72
VHS3YOR054C RPS24BP0CX32 135 aaKnown RBP4.31□□□□□ -1.72
VHS3YOR054C GFA1P14742 717 aaKnown RBP4.31□□□□□ -1.72
VHS3YOR054C SEC2P17065 759 aa4.31□□□□□ -1.72
VHS3YOR054C GAP1P19145 602 aaPredicted RBP4.31□□□□□ -1.72
VHS3YOR054C GRX1P25373 110 aaKnown RBP4.31□□□□□ -1.72
VHS3YOR054C EFT1P32324 842 aaKnown RBP4.31□□□□□ -1.72
VHS3YOR054C NTH2P35172 780 aa4.31□□□□□ -1.72
VHS3YOR054C ERT1P38140 529 aa4.31□□□□□ -1.72
VHS3YOR054C SIP5P40210 489 aaKnown RBP4.31□□□□□ -1.72
VHS3YOR054C YNL320WP42840 284 aa4.31□□□□□ -1.72
VHS3YOR054C LAM5P43560 674 aa4.31□□□□□ -1.72
VHS3YOR054C YNL040WP53960 456 aaPredicted RBP4.31□□□□□ -1.72
VHS3YOR054C ADE16P54113 591 aaKnown RBP4.31□□□□□ -1.72
VHS3YOR054C PTA1Q01329 785 aaPredicted RBP4.31□□□□□ -1.72
VHS3YOR054C SWP1Q02795 286 aa4.31□□□□□ -1.72
VHS3YOR054C LGE1Q02796 332 aaKnown RBP4.31□□□□□ -1.72
VHS3YOR054C FRK1Q03002 865 aaPredicted RBP4.31□□□□□ -1.72
VHS3YOR054C UME1Q03010 460 aa4.31□□□□□ -1.72
VHS3YOR054C GTB1Q04924 702 aa4.31□□□□□ -1.72
VHS3YOR054C YLR257WQ06146 321 aaKnown RBP4.31□□□□□ -1.72
VHS3YOR054C YDL073WQ07454 984 aa4.31□□□□□ -1.72
VHS3YOR054C UIP4Q08926 304 aa4.31□□□□□ -1.72
VHS3YOR054C NEW1Q08972 1196 aaKnown RBP4.31□□□□□ -1.72
VHS3YOR054C FAP7Q12055 197 aaPredicted RBP4.31□□□□□ -1.72
VHS3YOR054C GET4Q12125 312 aa4.31□□□□□ -1.72
VHS3YOR054C YLR125WQ12138 136 aa4.31□□□□□ -1.72
VHS3YOR054C RUP1Q12242 671 aa4.31□□□□□ -1.72
VHS3YOR054C SPO21Q12411 609 aa4.31□□□□□ -1.72
VHS3YOR054C TUS1Q06412 1307 aa4.3□□□□□ -1.72
VHS3YOR054C SEM1O94742 89 aa4.3□□□□□ -1.72
VHS3YOR054C HEM1P09950 548 aaPredicted RBP4.3□□□□□ -1.72
VHS3YOR054C YML002WP0CF17 737 aa4.3□□□□□ -1.72
VHS3YOR054C HMG1P12683 1054 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms