RNA–Protein interactions for RNA: YMR314W

PRE5, Transcript of Alpha 6 subunit of the 20S proteasome, yeastyeast

Gene PRE5, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE5YMR314W ISF1P32488 338 aa8.23□□□□□ -1.09
PRE5YMR314W YPT35P38815 214 aaKnown RBP8.23□□□□□ -1.09
PRE5YMR314W AIM9P40053 627 aaKnown RBP8.23□□□□□ -1.09
PRE5YMR314W POL31P46957 487 aa8.23□□□□□ -1.09
PRE5YMR314W ARK1P53974 638 aa8.23□□□□□ -1.09
PRE5YMR314W GCR2Q01722 534 aa8.23□□□□□ -1.09
PRE5YMR314W YRR1Q12172 810 aa8.23□□□□□ -1.09
PRE5YMR314W CDC6P09119 513 aa8.22□□□□□ -1.09
PRE5YMR314W VPS1P21576 704 aaKnown RBP8.22□□□□□ -1.09
PRE5YMR314W VPS3P23643 1011 aa8.22□□□□□ -1.09
PRE5YMR314W KIP1P28742 1111 aa8.22□□□□□ -1.09
PRE5YMR314W PSE1P32337 1089 aaKnown RBP8.22□□□□□ -1.09
PRE5YMR314W YBL036CP38197 257 aa8.22□□□□□ -1.09
PRE5YMR314W SIP3P38717 1229 aa8.22□□□□□ -1.09
PRE5YMR314W VPS25P47142 202 aa8.22□□□□□ -1.09
PRE5YMR314W ALT1P52893 592 aa8.22□□□□□ -1.09
PRE5YMR314W VTC3Q02725 835 aa8.22□□□□□ -1.09
PRE5YMR314W CTF3Q12748 733 aa8.22□□□□□ -1.09
PRE5YMR314W RPL4AP10664 362 aaKnown RBP8.21□□□□□ -1.1
PRE5YMR314W GPI10P30777 616 aa8.21□□□□□ -1.1
PRE5YMR314W BCH2P36122 765 aa8.21□□□□□ -1.1
PRE5YMR314W CDC27P38042 758 aa8.21□□□□□ -1.1
PRE5YMR314W PIH1P38768 344 aa8.21□□□□□ -1.1
PRE5YMR314W BIM1P40013 344 aa8.21□□□□□ -1.1
PRE5YMR314W CHS6P40955 746 aa8.21□□□□□ -1.1
PRE5YMR314W IES1P43579 692 aa8.21□□□□□ -1.1
PRE5YMR314W RPL4BP49626 362 aaKnown RBP8.21□□□□□ -1.1
PRE5YMR314W CBK1P53894 756 aa8.21□□□□□ -1.1
PRE5YMR314W ARP5P53946 755 aa8.21□□□□□ -1.1
PRE5YMR314W SHS1Q07657 551 aa8.21□□□□□ -1.1
PRE5YMR314W BRR2P32639 2163 aaKnown RBP8.21□□□□□ -1.1
PRE5YMR314W MTF1P14908 341 aaKnown RBP8.2□□□□□ -1.1
PRE5YMR314W FRS2P15625 503 aaKnown RBP8.2□□□□□ -1.1
PRE5YMR314W NAM7P30771 971 aaKnown RBP8.2□□□□□ -1.1
PRE5YMR314W YSC83P32792 385 aa8.2□□□□□ -1.1
PRE5YMR314W PGM2P37012 569 aaKnown RBP8.2□□□□□ -1.1
PRE5YMR314W HXT13P39924 564 aa8.2□□□□□ -1.1
PRE5YMR314W NUP82P40368 713 aa8.2□□□□□ -1.1
PRE5YMR314W VTC2P43585 828 aa8.2□□□□□ -1.1
PRE5YMR314W SCD6P45978 349 aaKnown RBP RIP-Chip data8.2□□□□□ -1.1not detected
PRE5YMR314W YGR153WP48238 217 aa8.2□□□□□ -1.1
PRE5YMR314W ORC5P50874 479 aa8.2□□□□□ -1.1
PRE5YMR314W SDA1P53313 767 aaKnown RBP8.2□□□□□ -1.1
PRE5YMR314W TUF1P02992 437 aaKnown RBP8.19□□□□□ -1.1
PRE5YMR314W SSD1P24276 1250 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
PRE5YMR314W CSE1P33307 960 aa8.19□□□□□ -1.1
PRE5YMR314W SLA2P33338 968 aa8.19□□□□□ -1.1
PRE5YMR314W YHR054CP38780 354 aa8.19□□□□□ -1.1
PRE5YMR314W PCF11P39081 626 aaPredicted RBP8.19□□□□□ -1.1
PRE5YMR314W BTT1P40314 149 aaPredicted RBP8.19□□□□□ -1.1
PRE5YMR314W KRI1P42846 591 aaKnown RBP8.19□□□□□ -1.1
PRE5YMR314W UTP8P53276 713 aaKnown RBP8.19□□□□□ -1.1
PRE5YMR314W YLR407WQ06070 228 aa8.19□□□□□ -1.1
PRE5YMR314W FLC1Q08967 793 aa8.19□□□□□ -1.1
PRE5YMR314W YPQ1Q12010 308 aa8.19□□□□□ -1.1
PRE5YMR314W HRT3Q12347 344 aa8.19□□□□□ -1.1
PRE5YMR314W YEL076C-AP0CX16 216 aa8.18□□□□□ -1.1
PRE5YMR314W YLR464WP0CX17 216 aa8.18□□□□□ -1.1
PRE5YMR314W TAF13P11747 167 aa8.18□□□□□ -1.1
PRE5YMR314W PPH22P23595 377 aa8.18□□□□□ -1.1
PRE5YMR314W RAD16P31244 790 aa8.18□□□□□ -1.1
PRE5YMR314W MNN4P36044 1178 aa8.18□□□□□ -1.1
PRE5YMR314W STS1P38637 319 aa8.18□□□□□ -1.1
PRE5YMR314W YEL076CP39971 216 aa8.18□□□□□ -1.1
PRE5YMR314W NOP13P53883 403 aaKnown RBP RIP-Chip data8.18□□□□□ -1.1not detected
PRE5YMR314W HER2Q03557 464 aa8.18□□□□□ -1.1
PRE5YMR314W SNU56Q03782 492 aaKnown RBP8.18□□□□□ -1.1
PRE5YMR314W TIF35Q04067 274 aaKnown RBP8.18□□□□□ -1.1
PRE5YMR314W BSP1Q06604 576 aa8.18□□□□□ -1.1
PRE5YMR314W YOR296WQ08748 1289 aa8.18□□□□□ -1.1
PRE5YMR314W GET3Q12154 354 aaKnown RBP8.18□□□□□ -1.1
PRE5YMR314W TPK1P06244 397 aa8.17□□□□□ -1.1
PRE5YMR314W SSB1P11484 613 aaKnown RBP8.17□□□□□ -1.1
PRE5YMR314W PFK1P16861 987 aaKnown RBP8.17□□□□□ -1.1
PRE5YMR314W CKA2P19454 339 aa8.17□□□□□ -1.1
PRE5YMR314W SSB2P40150 613 aaKnown RBP8.17□□□□□ -1.1
PRE5YMR314W TGL3P40308 642 aa8.17□□□□□ -1.1
PRE5YMR314W ASN1P49089 572 aaKnown RBP8.17□□□□□ -1.1
PRE5YMR314W JIP5Q06214 492 aaPredicted RBP8.17□□□□□ -1.1
PRE5YMR314W CUR1Q06469 252 aa8.17□□□□□ -1.1
PRE5YMR314W TAF10Q12030 206 aa8.17□□□□□ -1.1
PRE5YMR314W HAA1Q12753 694 aaKnown RBP8.17□□□□□ -1.1
PRE5YMR314W POL2P21951 2222 aaKnown RBP8.17□□□□□ -1.1
PRE5YMR314W ALG1P16661 449 aa8.16□□□□□ -1.1
PRE5YMR314W MET4P32389 672 aa8.16□□□□□ -1.1
PRE5YMR314W PDR3P33200 976 aa8.16□□□□□ -1.1
PRE5YMR314W TSA1P34760 196 aaKnown RBP8.16□□□□□ -1.1
PRE5YMR314W YKR051WP36142 418 aa8.16□□□□□ -1.1
PRE5YMR314W GIP1P38229 639 aa8.16□□□□□ -1.1
PRE5YMR314W SIF2P38262 535 aa8.16□□□□□ -1.1
PRE5YMR314W DOT6P40059 670 aaKnown RBP8.16□□□□□ -1.1
PRE5YMR314W CUE3P53137 624 aaKnown RBP8.16□□□□□ -1.1
PRE5YMR314W NMA2P53204 395 aa8.16□□□□□ -1.1
PRE5YMR314W ADY4Q05955 493 aa8.16□□□□□ -1.1
PRE5YMR314W YDL057WQ07379 328 aa8.16□□□□□ -1.1
PRE5YMR314W NBL1Q3E7Y6 73 aa8.16□□□□□ -1.1
PRE5YMR314W UBP13P38187 747 aa8.15□□□□□ -1.1
PRE5YMR314W GGA2P38817 585 aaKnown RBP8.15□□□□□ -1.1
PRE5YMR314W GIP4P39732 760 aa8.15□□□□□ -1.1
PRE5YMR314W ENT3P47160 408 aa8.15□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms