RNA–Protein interactions for RNA: YLR353W

BUD8, Transcript of Protein involved in bud-site selection, yeastyeast

Gene BUD8, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD8YLR353W YLR001CQ07895 862 aa5.65□□□□□ -1.5
BUD8YLR353W CAF20P12962 161 aaKnown RBP5.64□□□□□ -1.51
BUD8YLR353W RAD53P22216 821 aa5.64□□□□□ -1.51
BUD8YLR353W YRO2P38079 344 aa5.64□□□□□ -1.51
BUD8YLR353W ACM1Q08981 209 aa5.64□□□□□ -1.51
BUD8YLR353W AFR1P33304 620 aa5.64□□□□□ -1.51
BUD8YLR353W SLA2P33338 968 aa5.64□□□□□ -1.51
BUD8YLR353W YJL045WP47052 634 aa5.64□□□□□ -1.51
BUD8YLR353W YGR237CP50089 785 aa5.64□□□□□ -1.51
BUD8YLR353W NCE103P53615 221 aa5.64□□□□□ -1.51
BUD8YLR353W TY1A-NL1Q12391 440 aaKnown RBP5.63□□□□□ -1.51
BUD8YLR353W DPH6Q12429 685 aa5.63□□□□□ -1.51
BUD8YLR353W LPD1P09624 499 aaKnown RBP5.62□□□□□ -1.51
BUD8YLR353W VBA3P25594 458 aa5.62□□□□□ -1.51
BUD8YLR353W PRO1P32264 428 aa5.62□□□□□ -1.51
BUD8YLR353W GPT2P36148 743 aa5.62□□□□□ -1.51
BUD8YLR353W RRM3P38766 723 aa5.62□□□□□ -1.51
BUD8YLR353W NUG1P40010 520 aaKnown RBP5.62□□□□□ -1.51
BUD8YLR353W TOK1P40310 691 aa5.62□□□□□ -1.51
BUD8YLR353W SEC26P41810 973 aaKnown RBP5.62□□□□□ -1.51
BUD8YLR353W HRQ1Q05549 1077 aa5.62□□□□□ -1.51
BUD8YLR353W THI73Q07904 523 aa5.62□□□□□ -1.51
BUD8YLR353W PHR1P05066 565 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
BUD8YLR353W SPC29P33419 253 aa5.62□□□□□ -1.51
BUD8YLR353W YKL151CP36059 337 aa5.62□□□□□ -1.51
BUD8YLR353W UIP5P36137 443 aa5.62□□□□□ -1.51
BUD8YLR353W HOS3Q02959 697 aaKnown RBP5.62□□□□□ -1.51
BUD8YLR353W NUP145P49687 1317 aa5.61□□□□□ -1.51
BUD8YLR353W ACC1Q00955 2233 aaKnown RBP5.61□□□□□ -1.51
BUD8YLR353W YSC84P32793 468 aa5.61□□□□□ -1.51
BUD8YLR353W SAH1P39954 449 aaKnown RBP5.61□□□□□ -1.51
BUD8YLR353W ALT1P52893 592 aa5.61□□□□□ -1.51
BUD8YLR353W SDA1P53313 767 aaKnown RBP5.61□□□□□ -1.51
BUD8YLR353W FOL1P53848 824 aa5.61□□□□□ -1.51
BUD8YLR353W UME1Q03010 460 aa5.61□□□□□ -1.51
BUD8YLR353W YOL057WQ08225 711 aa5.61□□□□□ -1.51
BUD8YLR353W PUS7Q08647 676 aaKnown RBP5.61□□□□□ -1.51
BUD8YLR353W YDL176WQ12027 708 aa5.61□□□□□ -1.51
BUD8YLR353W YLL058WQ12198 575 aa5.61□□□□□ -1.51
BUD8YLR353W CDC9P04819 755 aa5.6□□□□□ -1.51
BUD8YLR353W NPP1P25353 742 aa5.6□□□□□ -1.51
BUD8YLR353W REC104P33323 182 aa5.6□□□□□ -1.51
BUD8YLR353W GRX7P38068 203 aa5.6□□□□□ -1.51
BUD8YLR353W NMD3P38861 518 aaKnown RBP5.6□□□□□ -1.51
BUD8YLR353W CCM1P48237 864 aaPredicted RBP5.6□□□□□ -1.51
BUD8YLR353W TNA1P53322 534 aa5.6□□□□□ -1.51
BUD8YLR353W TPP1Q03796 238 aa5.6□□□□□ -1.51
BUD8YLR353W MTC5Q03897 1148 aa5.6□□□□□ -1.51
BUD8YLR353W SNF5P18480 905 aa5.6□□□□□ -1.51
BUD8YLR353W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
BUD8YLR353W MCM3P24279 971 aaKnown RBP5.6□□□□□ -1.51
BUD8YLR353W YEL1P34225 687 aa5.6□□□□□ -1.51
BUD8YLR353W BAP2P38084 609 aa5.6□□□□□ -1.51
BUD8YLR353W MGS1P40151 587 aa5.6□□□□□ -1.51
BUD8YLR353W TPM2P40414 161 aa5.6□□□□□ -1.51
BUD8YLR353W GPG1P53130 126 aa5.6□□□□□ -1.51
BUD8YLR353W YGR283CP53336 341 aaPredicted RBP5.6□□□□□ -1.51
BUD8YLR353W TMA17Q12513 150 aa5.6□□□□□ -1.51
BUD8YLR353W SRD1P09007 221 aa5.59□□□□□ -1.51
BUD8YLR353W SFA1P32771 386 aa5.59□□□□□ -1.51
BUD8YLR353W YKR078WP36158 585 aaKnown RBP5.59□□□□□ -1.51
BUD8YLR353W YFL054CP43549 646 aa5.59□□□□□ -1.51
BUD8YLR353W GYP8P43570 497 aa5.59□□□□□ -1.51
BUD8YLR353W PRP43P53131 767 aaKnown RBP5.59□□□□□ -1.51
BUD8YLR353W HPF1Q05164 967 aa5.59□□□□□ -1.51
BUD8YLR353W MTC2P34246 357 aa5.58□□□□□ -1.52
BUD8YLR353W GYP7P48365 746 aa5.58□□□□□ -1.52
BUD8YLR353W ALO1P54783 526 aaKnown RBP5.58□□□□□ -1.52
BUD8YLR353W ATP25Q03153 612 aa5.58□□□□□ -1.52
BUD8YLR353W CRF1Q04930 467 aa5.58□□□□□ -1.52
BUD8YLR353W COQ4O13525 335 aa5.58□□□□□ -1.52
BUD8YLR353W CBP1P07252 654 aa5.58□□□□□ -1.52
BUD8YLR353W RPS24AP0CX31 135 aaKnown RBP5.58□□□□□ -1.52
BUD8YLR353W RPS24BP0CX32 135 aaKnown RBP5.58□□□□□ -1.52
BUD8YLR353W RPS4AP0CX35 261 aaKnown RBP5.58□□□□□ -1.52
BUD8YLR353W RPS4BP0CX36 261 aaKnown RBP5.58□□□□□ -1.52
BUD8YLR353W EMC3P36039 253 aa5.58□□□□□ -1.52
BUD8YLR353W TSL1P38427 1098 aaKnown RBP5.58□□□□□ -1.52
BUD8YLR353W DAM1P53267 343 aa5.58□□□□□ -1.52
BUD8YLR353W MDM38Q08179 573 aa5.58□□□□□ -1.52
BUD8YLR353W FAP7Q12055 197 aaPredicted RBP5.58□□□□□ -1.52
BUD8YLR353W BI4P03879 638 aa5.57□□□□□ -1.52
BUD8YLR353W PCL2P25693 308 aa5.57□□□□□ -1.52
BUD8YLR353W HSP104P31539 908 aaKnown RBP5.57□□□□□ -1.52
BUD8YLR353W ENV7Q12003 364 aa5.57□□□□□ -1.52
BUD8YLR353W RAD18P10862 487 aa5.56□□□□□ -1.52
BUD8YLR353W MDJ1P35191 511 aa5.56□□□□□ -1.52
BUD8YLR353W PIK1P39104 1066 aa5.56□□□□□ -1.52
BUD8YLR353W BOI2P39969 1040 aa5.56□□□□□ -1.52
BUD8YLR353W CAF16P43569 289 aa5.56□□□□□ -1.52
BUD8YLR353W TY4A-JP47023 414 aa5.56□□□□□ -1.52
BUD8YLR353W PEX8P53248 589 aa5.56□□□□□ -1.52
BUD8YLR353W GAR1P28007 205 aaKnown RBP5.55□□□□□ -1.52
BUD8YLR353W STO1P34160 861 aaKnown RBP5.55□□□□□ -1.52
BUD8YLR353W YBR238CP38330 731 aaKnown RBP5.55□□□□□ -1.52
BUD8YLR353W YJR120WP47157 116 aa5.55□□□□□ -1.52
BUD8YLR353W MTC3P53077 123 aa5.55□□□□□ -1.52
BUD8YLR353W MET13P53128 600 aa5.55□□□□□ -1.52
BUD8YLR353W BUD9P53226 547 aa5.55□□□□□ -1.52
BUD8YLR353W COG8Q04632 607 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms