RNA–Protein interactions for RNA: YLR035C-A

YLR035C-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR035C-A, Length 3,468 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR035C-AYLR035C-A ORC1P54784 914 aaPredicted RBP2.08□□□□□ -2.08
YLR035C-AYLR035C-A OSW7P43611 510 aa2.08□□□□□ -2.08
YLR035C-AYLR035C-A SSY5P47002 699 aa2.08□□□□□ -2.08
YLR035C-AYLR035C-A KEL2P50090 882 aa2.08□□□□□ -2.08
YLR035C-AYLR035C-A ZDS1P50111 915 aaKnown RBP2.08□□□□□ -2.08
YLR035C-AYLR035C-A TAN1P53072 289 aaPredicted RBP2.08□□□□□ -2.08
YLR035C-AYLR035C-A DUS4Q06063 367 aa2.08□□□□□ -2.08
YLR035C-AYLR035C-A HMI1Q12039 706 aa2.08□□□□□ -2.08
YLR035C-AYLR035C-A TY1B-HO13535 1793 aa2.07□□□□□ -2.08
YLR035C-AYLR035C-A STI1P15705 589 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
YLR035C-AYLR035C-A FUN30P31380 1131 aa2.07□□□□□ -2.08
YLR035C-AYLR035C-A SNF7P39929 240 aaKnown RBP2.07□□□□□ -2.08
YLR035C-AYLR035C-A YFL052WP43551 465 aa2.07□□□□□ -2.08
YLR035C-AYLR035C-A UBP6P43593 499 aaKnown RBP2.07□□□□□ -2.08
YLR035C-AYLR035C-A ALG2P43636 503 aa2.07□□□□□ -2.08
YLR035C-AYLR035C-A NCS6P53088 359 aa2.07□□□□□ -2.08
YLR035C-AYLR035C-A LCD1Q04377 747 aa2.07□□□□□ -2.08
YLR035C-AYLR035C-A KCS1Q12494 1050 aa2.07□□□□□ -2.08
YLR035C-AYLR035C-A NMD2P38798 1089 aaKnown RBP2.07□□□□□ -2.08
YLR035C-AYLR035C-A NOC2P39744 710 aaKnown RBP2.07□□□□□ -2.08
YLR035C-AYLR035C-A YNL195CP40168 261 aa2.07□□□□□ -2.08
YLR035C-AYLR035C-A YGL081WP53156 320 aa2.07□□□□□ -2.08
YLR035C-AYLR035C-A CDC9P04819 755 aa2.07□□□□□ -2.08
YLR035C-AYLR035C-A OPI1P21957 404 aa2.07□□□□□ -2.08
YLR035C-AYLR035C-A STE13P33894 931 aa2.07□□□□□ -2.08
YLR035C-AYLR035C-A THI80P35202 319 aa2.07□□□□□ -2.08
YLR035C-AYLR035C-A VHR1P40522 640 aa2.07□□□□□ -2.08
YLR035C-AYLR035C-A ATP22P50273 684 aaPredicted RBP2.07□□□□□ -2.08
YLR035C-AYLR035C-A MRPS35P53292 345 aa2.07□□□□□ -2.08
YLR035C-AYLR035C-A SUN4P53616 420 aa2.07□□□□□ -2.08
YLR035C-AYLR035C-A PEX19Q07418 342 aa2.07□□□□□ -2.08
YLR035C-AYLR035C-A ADR1P07248 1323 aa2.07□□□□□ -2.08
YLR035C-AYLR035C-A IRC20Q06554 1556 aa2.06□□□□□ -2.08
YLR035C-AYLR035C-A TYE7P33122 291 aaPredicted RBP2.06□□□□□ -2.08
YLR035C-AYLR035C-A HIS7P33734 552 aaKnown RBP2.06□□□□□ -2.08
YLR035C-AYLR035C-A GDH3P39708 457 aa2.06□□□□□ -2.08
YLR035C-AYLR035C-A ENT3P47160 408 aa2.06□□□□□ -2.08
YLR035C-AYLR035C-A HLJ1P48353 224 aa2.06□□□□□ -2.08
YLR035C-AYLR035C-A GYP7P48365 746 aa2.06□□□□□ -2.08
YLR035C-AYLR035C-A NIT3P49954 291 aa2.06□□□□□ -2.08
YLR035C-AYLR035C-A YKR011CQ02209 353 aa2.06□□□□□ -2.08
YLR035C-AYLR035C-A YDR514CQ04408 483 aa2.06□□□□□ -2.08
YLR035C-AYLR035C-A ENV7Q12003 364 aa2.06□□□□□ -2.08
YLR035C-AYLR035C-A TUB2P02557 457 aaKnown RBP2.06□□□□□ -2.08
YLR035C-AYLR035C-A PET111P08468 800 aa2.06□□□□□ -2.08
YLR035C-AYLR035C-A PFK1P16861 987 aaKnown RBP2.06□□□□□ -2.08
YLR035C-AYLR035C-A HCM1P25364 564 aa2.06□□□□□ -2.08
YLR035C-AYLR035C-A PIL1P53252 339 aaKnown RBP2.06□□□□□ -2.08
YLR035C-AYLR035C-A DUS1P53759 423 aaKnown RBP2.06□□□□□ -2.08
YLR035C-AYLR035C-A RNH1Q04740 348 aa2.06□□□□□ -2.08
YLR035C-AYLR035C-A SWM1Q12379 170 aa2.06□□□□□ -2.08
YLR035C-AYLR035C-A HOM2P13663 365 aaKnown RBP2.05□□□□□ -2.08
YLR035C-AYLR035C-A HRR25P29295 494 aaKnown RBP2.05□□□□□ -2.08
YLR035C-AYLR035C-A SUL1P38359 859 aa2.05□□□□□ -2.08
YLR035C-AYLR035C-A POP2P39008 433 aa2.05□□□□□ -2.08
YLR035C-AYLR035C-A HOS4P40480 1083 aa2.05□□□□□ -2.08
YLR035C-AYLR035C-A TY4A-JP47023 414 aa2.05□□□□□ -2.08
YLR035C-AYLR035C-A PBP1P53297 722 aaKnown RBP2.05□□□□□ -2.08
YLR035C-AYLR035C-A YNR061CP53747 219 aa2.05□□□□□ -2.08
YLR035C-AYLR035C-A RSC3Q06639 885 aa2.05□□□□□ -2.08
YLR035C-AYLR035C-A HIM1Q06674 414 aa2.05□□□□□ -2.08
YLR035C-AYLR035C-A SAC3P46674 1301 aa2.05□□□□□ -2.08
YLR035C-AYLR035C-A THS1P04801 734 aaKnown RBP2.05□□□□□ -2.08
YLR035C-AYLR035C-A MPH2P0CD99 609 aa2.05□□□□□ -2.08
YLR035C-AYLR035C-A RPN12P32496 274 aa2.05□□□□□ -2.08
YLR035C-AYLR035C-A SWI3P32591 825 aa2.05□□□□□ -2.08
YLR035C-AYLR035C-A YMR124WP39523 943 aaKnown RBP2.05□□□□□ -2.08
YLR035C-AYLR035C-A DOT6P40059 670 aaKnown RBP2.05□□□□□ -2.08
YLR035C-AYLR035C-A NIT1P40447 199 aa2.05□□□□□ -2.08
YLR035C-AYLR035C-A CLU1Q03690 1277 aaKnown RBP2.05□□□□□ -2.08
YLR035C-AYLR035C-A YSH1Q06224 779 aaPredicted RBP2.05□□□□□ -2.08
YLR035C-AYLR035C-A MON2P48563 1636 aaPredicted RBP2.05□□□□□ -2.08
YLR035C-AYLR035C-A TRX2P22803 104 aaKnown RBP2.05□□□□□ -2.08
YLR035C-AYLR035C-A KAR4P25583 335 aa2.05□□□□□ -2.08
YLR035C-AYLR035C-A CTS1P29029 562 aa2.05□□□□□ -2.08
YLR035C-AYLR035C-A KIN4Q01919 800 aa2.05□□□□□ -2.08
YLR035C-AYLR035C-A POB3Q04636 552 aaKnown RBP2.05□□□□□ -2.08
YLR035C-AYLR035C-A PCL8Q08966 492 aa2.05□□□□□ -2.08
YLR035C-AYLR035C-A NOP56Q12460 504 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
YLR035C-AYLR035C-A CDC6P09119 513 aa2.04□□□□□ -2.08
YLR035C-AYLR035C-A PRP6P19735 899 aaPredicted RBP2.04□□□□□ -2.08
YLR035C-AYLR035C-A PRP4P20053 465 aaKnown RBP2.04□□□□□ -2.08
YLR035C-AYLR035C-A SEC21P32074 935 aaKnown RBP2.04□□□□□ -2.08
YLR035C-AYLR035C-A MFT1P33441 392 aaKnown RBP2.04□□□□□ -2.08
YLR035C-AYLR035C-A OCA5P38738 679 aa2.04□□□□□ -2.08
YLR035C-AYLR035C-A AFG3P39925 761 aa2.04□□□□□ -2.08
YLR035C-AYLR035C-A PZF1P39933 429 aa2.04□□□□□ -2.08
YLR035C-AYLR035C-A MTR3P48240 250 aaPredicted RBP2.04□□□□□ -2.08
YLR035C-AYLR035C-A ENV11P53246 860 aa2.04□□□□□ -2.08
YLR035C-AYLR035C-A NNF2P53253 936 aa2.04□□□□□ -2.08
YLR035C-AYLR035C-A DOS2P54858 310 aa2.04□□□□□ -2.08
YLR035C-AYLR035C-A MUK1Q02866 612 aa2.04□□□□□ -2.08
YLR035C-AYLR035C-A HEL2Q05580 639 aaKnown RBP2.04□□□□□ -2.08
YLR035C-AYLR035C-A DIF1O13577 133 aa2.04□□□□□ -2.08
YLR035C-AYLR035C-A CYB2P00175 591 aa2.04□□□□□ -2.08
YLR035C-AYLR035C-A PXA2P34230 853 aa2.04□□□□□ -2.08
YLR035C-AYLR035C-A MNN1P39106 762 aa2.04□□□□□ -2.08
YLR035C-AYLR035C-A CCM1P48237 864 aaPredicted RBP2.04□□□□□ -2.08
YLR035C-AYLR035C-A VMS1Q04311 632 aaKnown RBP2.04□□□□□ -2.08
YLR035C-AYLR035C-A LAS17Q12446 633 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 68.2 ms