RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C PCI8P40512 444 aa6.19□□□□□ -1.42
SSK1YLR006C AGX1P43567 385 aa6.19□□□□□ -1.42
SSK1YLR006C TYW3P53177 273 aa6.19□□□□□ -1.42
SSK1YLR006C GIS4Q04233 774 aa6.19□□□□□ -1.42
SSK1YLR006C ATG38Q05789 226 aaKnown RBP6.19□□□□□ -1.42
SSK1YLR006C TFB4Q12004 338 aa6.19□□□□□ -1.42
SSK1YLR006C PMD1P32634 1753 aa6.18□□□□□ -1.42
SSK1YLR006C MTF2P10849 440 aa6.18□□□□□ -1.42
SSK1YLR006C DIT1P21623 536 aa6.18□□□□□ -1.42
SSK1YLR006C CHS3P29465 1165 aa6.18□□□□□ -1.42
SSK1YLR006C PSO2P30620 661 aa6.18□□□□□ -1.42
SSK1YLR006C PPQ1P32945 549 aa6.18□□□□□ -1.42
SSK1YLR006C HSP78P33416 811 aa6.18□□□□□ -1.42
SSK1YLR006C CTM1P38818 585 aa6.18□□□□□ -1.42
SSK1YLR006C YTA6P40328 754 aa6.18□□□□□ -1.42
SSK1YLR006C FOL2P51601 243 aaKnown RBP6.18□□□□□ -1.42
SSK1YLR006C SNZ1Q03148 297 aa6.18□□□□□ -1.42
SSK1YLR006C SML1Q04964 104 aa6.18□□□□□ -1.42
SSK1YLR006C YLR287CQ05881 355 aa6.18□□□□□ -1.42
SSK1YLR006C MDM38Q08179 573 aa6.18□□□□□ -1.42
SSK1YLR006C REX3Q12090 404 aa6.18□□□□□ -1.42
SSK1YLR006C RIT1P23796 513 aa6.17□□□□□ -1.42
SSK1YLR006C DAL1P32375 460 aa6.17□□□□□ -1.42
SSK1YLR006C GCD6P32501 712 aaKnown RBP6.17□□□□□ -1.42
SSK1YLR006C SFA1P32771 386 aa6.17□□□□□ -1.42
SSK1YLR006C MDL2P33311 773 aa6.17□□□□□ -1.42
SSK1YLR006C FAA4P47912 694 aaKnown RBP6.17□□□□□ -1.42
SSK1YLR006C YGR250CP53316 781 aaKnown RBP6.17□□□□□ -1.42
SSK1YLR006C MEP3P53390 489 aa6.17□□□□□ -1.42
SSK1YLR006C YNL247WP53852 767 aaKnown RBP6.17□□□□□ -1.42
SSK1YLR006C EBS1Q03466 884 aaKnown RBP6.17□□□□□ -1.42
SSK1YLR006C YOR296WQ08748 1289 aa6.17□□□□□ -1.42
SSK1YLR006C NEW1Q08972 1196 aaKnown RBP6.17□□□□□ -1.42
SSK1YLR006C NFI1Q12216 726 aa6.17□□□□□ -1.42
SSK1YLR006C RPC40P07703 335 aaKnown RBP6.17□□□□□ -1.42
SSK1YLR006C RPO26P20435 155 aa6.17□□□□□ -1.42
SSK1YLR006C RAD16P31244 790 aa6.17□□□□□ -1.42
SSK1YLR006C PXA2P34230 853 aa6.17□□□□□ -1.42
SSK1YLR006C RRP1P35178 278 aaPredicted RBP6.17□□□□□ -1.42
SSK1YLR006C RPC25P35718 212 aa6.17□□□□□ -1.42
SSK1YLR006C PTK1P36002 662 aaPredicted RBP6.17□□□□□ -1.42
SSK1YLR006C TOK1P40310 691 aa6.17□□□□□ -1.42
SSK1YLR006C LYS14P40971 790 aa6.17□□□□□ -1.42
SSK1YLR006C YJL181WP46987 611 aa6.17□□□□□ -1.42
SSK1YLR006C YML6P51998 286 aa6.17□□□□□ -1.42
SSK1YLR006C NAF1P53919 492 aaKnown RBP6.17□□□□□ -1.42
SSK1YLR006C ERG5P54781 538 aa6.17□□□□□ -1.42
SSK1YLR006C SEC5P89102 971 aa6.17□□□□□ -1.42
SSK1YLR006C PNG1Q02890 363 aa6.17□□□□□ -1.42
SSK1YLR006C OMS1Q06668 471 aa6.17□□□□□ -1.42
SSK1YLR006C MRN1Q08925 612 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
SSK1YLR006C HMI1Q12039 706 aa6.17□□□□□ -1.42
SSK1YLR006C RNR3P21672 869 aaKnown RBP6.16□□□□□ -1.42
SSK1YLR006C MSH1P25846 959 aa6.16□□□□□ -1.42
SSK1YLR006C YJU3P28321 313 aa6.16□□□□□ -1.42
SSK1YLR006C YEL043WP32618 956 aa6.16□□□□□ -1.42
SSK1YLR006C TFC4P33339 1025 aa6.16□□□□□ -1.42
SSK1YLR006C YHL041WP38730 149 aa6.16□□□□□ -1.42
SSK1YLR006C SWD1P39706 426 aa6.16□□□□□ -1.42
SSK1YLR006C GPP2P40106 250 aaKnown RBP6.16□□□□□ -1.42
SSK1YLR006C UPF3P48412 387 aaKnown RBP6.16□□□□□ -1.42
SSK1YLR006C MAL13P53338 473 aa6.16□□□□□ -1.42
SSK1YLR006C YMR102CQ03177 834 aa6.16□□□□□ -1.42
SSK1YLR006C TAF11Q04226 346 aa6.16□□□□□ -1.42
SSK1YLR006C VAC14Q06708 880 aa6.16□□□□□ -1.42
SSK1YLR006C BRE4Q07660 1125 aa6.16□□□□□ -1.42
SSK1YLR006C FIG2P25653 1609 aa6.16□□□□□ -1.42
SSK1YLR006C SPO12P17123 173 aa6.16□□□□□ -1.42
SSK1YLR006C PRI2P20457 528 aa6.16□□□□□ -1.42
SSK1YLR006C ESS1P22696 170 aa6.16□□□□□ -1.42
SSK1YLR006C MAK31P23059 88 aa6.16□□□□□ -1.42
SSK1YLR006C MCM3P24279 971 aaKnown RBP6.16□□□□□ -1.42
SSK1YLR006C SCJ1P25303 377 aa6.16□□□□□ -1.42
SSK1YLR006C LYP1P32487 611 aa6.16□□□□□ -1.42
SSK1YLR006C MYO3P36006 1272 aa6.16□□□□□ -1.42
SSK1YLR006C KTR4P38131 464 aa6.16□□□□□ -1.42
SSK1YLR006C MIP6P38760 659 aaKnown RBP6.16□□□□□ -1.42
SSK1YLR006C PEX18P38855 283 aa6.16□□□□□ -1.42
SSK1YLR006C ECM1P39715 212 aa6.16□□□□□ -1.42
SSK1YLR006C SHQ1P40486 507 aaPredicted RBP6.16□□□□□ -1.42
SSK1YLR006C CIT3P43635 486 aa6.16□□□□□ -1.42
SSK1YLR006C MAL11P53048 616 aa6.16□□□□□ -1.42
SSK1YLR006C NPY1P53164 384 aa6.16□□□□□ -1.42
SSK1YLR006C YAP1802P53309 568 aa6.16□□□□□ -1.42
SSK1YLR006C RPT4P53549 437 aaKnown RBP6.16□□□□□ -1.42
SSK1YLR006C UME1Q03010 460 aa6.16□□□□□ -1.42
SSK1YLR006C HEH2Q03281 663 aa6.16□□□□□ -1.42
SSK1YLR006C UTP5Q04177 643 aaKnown RBP6.16□□□□□ -1.42
SSK1YLR006C CUE5Q08412 411 aaKnown RBP6.16□□□□□ -1.42
SSK1YLR006C YPL216WQ08964 1102 aa6.16□□□□□ -1.42
SSK1YLR006C SCM3Q12334 223 aa6.16□□□□□ -1.42
SSK1YLR006C YIL002W-AQ3E7Z5 69 aa6.16□□□□□ -1.42
SSK1YLR006C MYO1P08964 1928 aa6.15□□□□□ -1.42
SSK1YLR006C CAN1P04817 590 aa6.15□□□□□ -1.42
SSK1YLR006C RPB4P20433 221 aaPredicted RBP6.15□□□□□ -1.42
SSK1YLR006C MIH1P23748 554 aa6.15□□□□□ -1.42
SSK1YLR006C CBF2P32504 956 aa6.15□□□□□ -1.42
SSK1YLR006C PET112P33893 541 aa6.15□□□□□ -1.42
SSK1YLR006C PXL1P36166 706 aa6.15□□□□□ -1.42
SSK1YLR006C MCX1P38323 520 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms