RNA–Protein interactions for RNA: YHR108W

GGA2, Transcript of Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking, yeastyeast

Gene GGA2, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GGA2YHR108W CFT2Q12102 859 aaPredicted RBP8.8□□□□□ -1
GGA2YHR108W YBL111CQ3E7Y5 667 aa8.8□□□□□ -1
GGA2YHR108W DED1P06634 604 aaKnown RBP8.79□□□□□ -1
GGA2YHR108W CLB1P24868 471 aa8.79□□□□□ -1
GGA2YHR108W EUG1P32474 517 aa8.79□□□□□ -1
GGA2YHR108W VPS29P38759 282 aa8.79□□□□□ -1
GGA2YHR108W EAF5P39995 279 aa8.79□□□□□ -1
GGA2YHR108W LCP5P40079 357 aaPredicted RBP8.79□□□□□ -1
GGA2YHR108W YTA12P40341 825 aa8.79□□□□□ -1
GGA2YHR108W IES4Q08561 116 aa8.79□□□□□ -1
GGA2YHR108W SSA1P10591 642 aaKnown RBP8.78□□□□□ -1
GGA2YHR108W SWI3P32591 825 aa8.78□□□□□ -1
GGA2YHR108W SLD2P34252 453 aa8.78□□□□□ -1
GGA2YHR108W RRT2P38332 387 aa8.78□□□□□ -1
GGA2YHR108W YJR079WP47126 109 aa8.78□□□□□ -1
GGA2YHR108W VPS70P47161 811 aa8.78□□□□□ -1
GGA2YHR108W BRO1P48582 844 aa8.78□□□□□ -1
GGA2YHR108W SHE10P53075 577 aa8.78□□□□□ -1
GGA2YHR108W RPA49Q01080 415 aaPredicted RBP8.78□□□□□ -1
GGA2YHR108W CEF1Q03654 590 aaPredicted RBP8.78□□□□□ -1
GGA2YHR108W COQ9Q05779 260 aa8.78□□□□□ -1
GGA2YHR108W SFH1Q06168 426 aa8.78□□□□□ -1
GGA2YHR108W RGA2Q06407 1009 aa8.78□□□□□ -1
GGA2YHR108W TFC4P33339 1025 aa8.78□□□□□ -1
GGA2YHR108W GDT1P38301 280 aaPredicted RBP8.78□□□□□ -1
GGA2YHR108W KAP123P40069 1113 aaKnown RBP8.78□□□□□ -1
GGA2YHR108W PXA1P41909 870 aa8.78□□□□□ -1
GGA2YHR108W YJR039WP47107 1121 aa8.78□□□□□ -1
GGA2YHR108W YGR111WP53265 400 aa8.78□□□□□ -1
GGA2YHR108W FAP1P53971 965 aa8.78□□□□□ -1
GGA2YHR108W TBF1Q02457 562 aa8.78□□□□□ -1
GGA2YHR108W PUS5Q06244 254 aa8.78□□□□□ -1
GGA2YHR108W GPI13Q07830 1017 aa8.78□□□□□ -1
GGA2YHR108W YOR223WQ12015 292 aa8.78□□□□□ -1
GGA2YHR108W DAL2P25335 343 aa8.77□□□□□ -1.01
GGA2YHR108W DBF4P32325 704 aa8.77□□□□□ -1.01
GGA2YHR108W CBF2P32504 956 aa8.77□□□□□ -1.01
GGA2YHR108W RRN6P32786 894 aa8.77□□□□□ -1.01
GGA2YHR108W MRX3P38172 270 aa8.77□□□□□ -1.01
GGA2YHR108W FTR1P40088 404 aa8.77□□□□□ -1.01
GGA2YHR108W YNL320WP42840 284 aa8.77□□□□□ -1.01
GGA2YHR108W SCD6P45978 349 aaKnown RBP RIP-Chip data8.77□□□□□ -1.01not detected
GGA2YHR108W CPR7P47103 393 aa8.77□□□□□ -1.01
GGA2YHR108W YGL140CP53120 1219 aa8.77□□□□□ -1.01
GGA2YHR108W DUS4Q06063 367 aa8.77□□□□□ -1.01
GGA2YHR108W IWR1Q07532 353 aaPredicted RBP8.77□□□□□ -1.01
GGA2YHR108W PUF3Q07807 879 aaKnown RBP RIP-Chip data8.77□□□□□ -1.01not detected
GGA2YHR108W IRE1P32361 1115 aa8.76□□□□□ -1.01
GGA2YHR108W CDC11P32458 415 aa8.76□□□□□ -1.01
GGA2YHR108W NCL1P38205 684 aaKnown RBP8.76□□□□□ -1.01
GGA2YHR108W TIF5P38431 405 aaKnown RBP8.76□□□□□ -1.01
GGA2YHR108W ASN1P49089 572 aaKnown RBP8.76□□□□□ -1.01
GGA2YHR108W RIM8P53179 542 aa8.76□□□□□ -1.01
GGA2YHR108W CUL3P53202 744 aa8.76□□□□□ -1.01
GGA2YHR108W YNL146WP53906 100 aa8.76□□□□□ -1.01
GGA2YHR108W UTP6Q02354 440 aaKnown RBP8.76□□□□□ -1.01
GGA2YHR108W YMR187CQ03236 431 aa8.76□□□□□ -1.01
GGA2YHR108W ATG16Q03818 150 aa8.76□□□□□ -1.01
GGA2YHR108W TDA9Q04545 1251 aa8.76□□□□□ -1.01
GGA2YHR108W YLL058WQ12198 575 aa8.76□□□□□ -1.01
GGA2YHR108W NAT1P12945 854 aaKnown RBP8.76□□□□□ -1.01
GGA2YHR108W PRP9P19736 530 aaKnown RBP8.76□□□□□ -1.01
GGA2YHR108W CSG2P35206 410 aa8.76□□□□□ -1.01
GGA2YHR108W YMR1P47147 688 aaKnown RBP RIP-Chip data8.76□□□□□ -1.01not detected
GGA2YHR108W ORC5P50874 479 aa8.76□□□□□ -1.01
GGA2YHR108W MTG1Q03151 367 aaPredicted RBP8.76□□□□□ -1.01
GGA2YHR108W YDR090CQ03193 310 aa8.76□□□□□ -1.01
GGA2YHR108W RPS3P05750 240 aaKnown RBP8.75□□□□□ -1.01
GGA2YHR108W EFT1P32324 842 aaKnown RBP8.75□□□□□ -1.01
GGA2YHR108W CCT2P39076 527 aaKnown RBP8.75□□□□□ -1.01
GGA2YHR108W PSP2P50109 593 aaKnown RBP8.75□□□□□ -1.01
GGA2YHR108W DRN1P53255 507 aaKnown RBP8.75□□□□□ -1.01
GGA2YHR108W STE20Q03497 939 aaKnown RBP8.75□□□□□ -1.01
GGA2YHR108W ERV41Q04651 352 aa8.75□□□□□ -1.01
GGA2YHR108W YDR222WQ04925 415 aa8.75□□□□□ -1.01
GGA2YHR108W HIF1Q12373 385 aa8.75□□□□□ -1.01
GGA2YHR108W DPH2P32461 534 aa8.74□□□□□ -1.01
GGA2YHR108W IXR1P33417 597 aa8.74□□□□□ -1.01
GGA2YHR108W DBP7P36120 742 aaKnown RBP8.74□□□□□ -1.01
GGA2YHR108W PCS60P38137 543 aaKnown RBP RIP-Chip data8.74□□□□□ -1.01not detected
GGA2YHR108W ECM2P38241 364 aaKnown RBP8.74□□□□□ -1.01
GGA2YHR108W MMS21P38632 267 aa8.74□□□□□ -1.01
GGA2YHR108W YIL089WP40500 205 aa8.74□□□□□ -1.01
GGA2YHR108W RPS7BP48164 190 aaKnown RBP8.74□□□□□ -1.01
GGA2YHR108W RPL22BP56628 122 aaKnown RBP8.74□□□□□ -1.01
GGA2YHR108W PPM1Q04081 328 aa8.74□□□□□ -1.01
GGA2YHR108W YMR321CQ04898 105 aa8.74□□□□□ -1.01
GGA2YHR108W TYW1Q08960 810 aaKnown RBP8.74□□□□□ -1.01
GGA2YHR108W SEY1Q99287 776 aa8.74□□□□□ -1.01
GGA2YHR108W ARG4P04076 463 aaPredicted RBP8.73□□□□□ -1.01
GGA2YHR108W IME1P21190 360 aa8.73□□□□□ -1.01
GGA2YHR108W YBL055CP34220 418 aaPredicted RBP8.73□□□□□ -1.01
GGA2YHR108W DYS1P38791 387 aa8.73□□□□□ -1.01
GGA2YHR108W INA22P40576 216 aa8.73□□□□□ -1.01
GGA2YHR108W SAP185P40856 1058 aa8.73□□□□□ -1.01
GGA2YHR108W SBE2P42223 864 aaKnown RBP8.73□□□□□ -1.01
GGA2YHR108W TRS85P46944 698 aa8.73□□□□□ -1.01
GGA2YHR108W MSC6Q08818 692 aaKnown RBP8.73□□□□□ -1.01
GGA2YHR108W GIS3Q12418 502 aa8.73□□□□□ -1.01
GGA2YHR108W AI5_BETAQ9ZZX0 354 aa8.73□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms