RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	TFC4	P33339	1025 aa		4.7	□□□□□ -1.66
YPT35	YHR105W	ALY2	P47029	1046 aa		4.7	□□□□□ -1.66
YPT35	YHR105W	PEX14	P53112	341 aa		4.7	□□□□□ -1.66
YPT35	YHR105W	COG8	Q04632	607 aa		4.7	□□□□□ -1.66
YPT35	YHR105W	CDA1	Q06702	301 aa		4.7	□□□□□ -1.66
YPT35	YHR105W	ESC8	Q08119	714 aa		4.7	□□□□□ -1.66
YPT35	YHR105W	YPL277C	Q08989	487 aa		4.7	□□□□□ -1.66
YPT35	YHR105W	MPD2	Q99316	277 aa		4.7	□□□□□ -1.66
YPT35	YHR105W	ENA1	P13587	1091 aa		4.69	□□□□□ -1.66
YPT35	YHR105W	RPD3	P32561	433 aa		4.69	□□□□□ -1.66
YPT35	YHR105W	TOD6	P34219	525 aa		4.69	□□□□□ -1.66
YPT35	YHR105W	MEF2	P39677	819 aa		4.69	□□□□□ -1.66
YPT35	YHR105W	ZRG8	P40021	1076 aa		4.69	□□□□□ -1.66
YPT35	YHR105W	NIT2	P47016	307 aa		4.69	□□□□□ -1.66
YPT35	YHR105W	GCV2	P49095	1034 aa		4.69	□□□□□ -1.66
YPT35	YHR105W	GTF1	P53260	183 aa	Predicted RBP	4.69	□□□□□ -1.66
YPT35	YHR105W	NOG2	P53742	486 aa	Known RBP	4.69	□□□□□ -1.66
YPT35	YHR105W	ENA2	Q01896	1091 aa		4.69	□□□□□ -1.66
YPT35	YHR105W	NHX1	Q04121	633 aa		4.69	□□□□□ -1.66
YPT35	YHR105W	TRE2	Q08693	809 aa		4.69	□□□□□ -1.66
YPT35	YHR105W	SLX4	Q12098	748 aa		4.69	□□□□□ -1.66
YPT35	YHR105W	ENA5	Q12691	1091 aa		4.69	□□□□□ -1.66
YPT35	YHR105W	TMA7	Q3E764	64 aa	Known RBP	4.69	□□□□□ -1.66
YPT35	YHR105W	RFA1	P22336	621 aa	Known RBP	4.68	□□□□□ -1.66
YPT35	YHR105W	STE13	P33894	931 aa		4.68	□□□□□ -1.66
YPT35	YHR105W	YKL222C	P35995	705 aa		4.68	□□□□□ -1.66
YPT35	YHR105W	YKR051W	P36142	418 aa		4.68	□□□□□ -1.66
YPT35	YHR105W	GPP2	P40106	250 aa	Known RBP	4.68	□□□□□ -1.66
YPT35	YHR105W	MND2	P40577	368 aa		4.68	□□□□□ -1.66
YPT35	YHR105W	NOP2	P40991	618 aa	Known RBP	4.68	□□□□□ -1.66
YPT35	YHR105W	ECM9	Q02202	377 aa		4.68	□□□□□ -1.66
YPT35	YHR105W	YDR132C	Q03900	495 aa		4.68	□□□□□ -1.66
YPT35	YHR105W	DUS4	Q06063	367 aa		4.68	□□□□□ -1.66
YPT35	YHR105W	YTM1	Q12024	460 aa	Predicted RBP	4.68	□□□□□ -1.66
YPT35	YHR105W	Q0142	Q9ZZW4	58 aa		4.68	□□□□□ -1.66
YPT35	YHR105W	SSN2	P38931	1420 aa		4.68	□□□□□ -1.66
YPT35	YHR105W	CDC6	P09119	513 aa		4.67	□□□□□ -1.66
YPT35	YHR105W	RPC82	P32349	654 aa		4.67	□□□□□ -1.66
YPT35	YHR105W	HXT6	P39003	570 aa	Known RBP	4.67	□□□□□ -1.66
YPT35	YHR105W	HXT7	P39004	570 aa		4.67	□□□□□ -1.66
YPT35	YHR105W	CCT5	P40413	562 aa	Known RBP	4.67	□□□□□ -1.66
YPT35	YHR105W	RLP7	P40693	322 aa	Known RBP	4.67	□□□□□ -1.66
YPT35	YHR105W	GZF3	P42944	551 aa	Known RBP	4.67	□□□□□ -1.66
YPT35	YHR105W	DUG1	P43616	481 aa	Known RBP	4.67	□□□□□ -1.66
YPT35	YHR105W	YGR012W	P53206	393 aa		4.67	□□□□□ -1.66
YPT35	YHR105W	SSL1	Q04673	461 aa	Predicted RBP	4.67	□□□□□ -1.66
YPT35	YHR105W	TPO1	Q07824	586 aa		4.67	□□□□□ -1.66
YPT35	YHR105W	YLR149C	Q99296	730 aa		4.67	□□□□□ -1.66
YPT35	YHR105W	RPS21A	P0C0V8	87 aa	Known RBP	4.66	□□□□□ -1.66
YPT35	YHR105W	YCR015C	P25616	317 aa		4.66	□□□□□ -1.66
YPT35	YHR105W	CYS3	P31373	394 aa	Known RBP	4.66	□□□□□ -1.66
YPT35	YHR105W	HIR1	P32479	840 aa		4.66	□□□□□ -1.66
YPT35	YHR105W	CEP3	P40969	608 aa		4.66	□□□□□ -1.66
YPT35	YHR105W	MNN11	P46985	422 aa	Known RBP	4.66	□□□□□ -1.66
YPT35	YHR105W	RAI1	P53063	387 aa	Known RBP	4.66	□□□□□ -1.66
YPT35	YHR105W	YKR011C	Q02209	353 aa		4.66	□□□□□ -1.66
YPT35	YHR105W	GCN5	Q03330	439 aa		4.66	□□□□□ -1.66
YPT35	YHR105W	THI21	Q08975	551 aa		4.66	□□□□□ -1.66
YPT35	YHR105W	HAL9	Q12180	1030 aa		4.66	□□□□□ -1.66
YPT35	YHR105W	YOR022C	Q12204	715 aa		4.66	□□□□□ -1.66
YPT35	YHR105W	RPS21B	Q3E754	87 aa	Known RBP	4.66	□□□□□ -1.66
YPT35	YHR105W	DIF1	O13577	133 aa		4.65	□□□□□ -1.67
YPT35	YHR105W	HSF1	P10961	833 aa		4.65	□□□□□ -1.67
YPT35	YHR105W	SER1	P33330	395 aa	Known RBP	4.65	□□□□□ -1.67
YPT35	YHR105W	FLR1	P38124	548 aa		4.65	□□□□□ -1.67
YPT35	YHR105W	PEA2	P40091	420 aa		4.65	□□□□□ -1.67
YPT35	YHR105W	RET2	P43621	546 aa		4.65	□□□□□ -1.67
YPT35	YHR105W	TAF1	P46677	1066 aa		4.65	□□□□□ -1.67
YPT35	YHR105W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
YPT35	YHR105W	YGR153W	P48238	217 aa		4.65	□□□□□ -1.67
YPT35	YHR105W	SPT20	P50875	604 aa		4.65	□□□□□ -1.67
YPT35	YHR105W	CRR1	Q05790	422 aa		4.65	□□□□□ -1.67
YPT35	YHR105W	WHI4	Q07655	649 aa	Known RBP	4.65	□□□□□ -1.67
YPT35	YHR105W	ADY3	Q07732	790 aa		4.65	□□□□□ -1.67
YPT35	YHR105W	SPE1	P08432	466 aa		4.64	□□□□□ -1.67
YPT35	YHR105W	FBP1	P09201	348 aa		4.64	□□□□□ -1.67
YPT35	YHR105W	SST2	P11972	698 aa	Known RBP	4.64	□□□□□ -1.67
YPT35	YHR105W	EMC1	P25574	760 aa		4.64	□□□□□ -1.67
YPT35	YHR105W	HEM12	P32347	362 aa	Predicted RBP	4.64	□□□□□ -1.67
YPT35	YHR105W	FUI1	P38196	639 aa		4.64	□□□□□ -1.67
YPT35	YHR105W	HSL7	P38274	827 aa		4.64	□□□□□ -1.67
YPT35	YHR105W	RPN10	P38886	268 aa	Known RBP	4.64	□□□□□ -1.67
YPT35	YHR105W	SET5	P38890	526 aa	Known RBP	4.64	□□□□□ -1.67
YPT35	YHR105W	GIP4	P39732	760 aa		4.64	□□□□□ -1.67
YPT35	YHR105W	ARP4	P80428	489 aa		4.64	□□□□□ -1.67
YPT35	YHR105W	GPB1	Q08886	897 aa		4.64	□□□□□ -1.67
YPT35	YHR105W	HMI1	Q12039	706 aa		4.64	□□□□□ -1.67
YPT35	YHR105W	DCS2	Q12123	353 aa		4.64	□□□□□ -1.67
YPT35	YHR105W	INO80	P53115	1489 aa		4.63	□□□□□ -1.67
YPT35	YHR105W	RPS9A	O13516	197 aa	Known RBP	4.63	□□□□□ -1.67
YPT35	YHR105W	YLR358C	O13565	187 aa		4.63	□□□□□ -1.67
YPT35	YHR105W	ATP4	P05626	244 aa		4.63	□□□□□ -1.67
YPT35	YHR105W	AEP2	P22136	580 aa		4.63	□□□□□ -1.67
YPT35	YHR105W	CDC20	P26309	610 aa		4.63	□□□□□ -1.67
YPT35	YHR105W	TYE7	P33122	291 aa	Predicted RBP	4.63	□□□□□ -1.67
YPT35	YHR105W	POA1	P38218	177 aa		4.63	□□□□□ -1.67
YPT35	YHR105W	FAT1	P38225	669 aa		4.63	□□□□□ -1.67
YPT35	YHR105W	TDA3	P38758	523 aa		4.63	□□□□□ -1.67
YPT35	YHR105W	DOT6	P40059	670 aa	Known RBP	4.63	□□□□□ -1.67
YPT35	YHR105W	DAS1	P47005	663 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms