RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W PGI1P12709 554 aaKnown RBP3.87□□□□□ -1.79
BCD1YHR040W NAM7P30771 971 aaKnown RBP3.87□□□□□ -1.79
BCD1YHR040W CRG1P38892 291 aaRIP-Chip data3.87□□□□□ -1.79not detected
BCD1YHR040W RRP8P38961 392 aaKnown RBP3.87□□□□□ -1.79
BCD1YHR040W HUL4P40985 892 aa3.87□□□□□ -1.79
BCD1YHR040W TFG2P41896 400 aaPredicted RBP3.87□□□□□ -1.79
BCD1YHR040W PFD1P46988 109 aa3.87□□□□□ -1.79
BCD1YHR040W TY4A-JP47023 414 aa3.87□□□□□ -1.79
BCD1YHR040W PMT3P47190 753 aa3.87□□□□□ -1.79
BCD1YHR040W UTP8P53276 713 aaKnown RBP3.87□□□□□ -1.79
BCD1YHR040W SPO20Q04359 397 aa3.87□□□□□ -1.79
BCD1YHR040W SPN1Q06505 410 aaPredicted RBP3.87□□□□□ -1.79
BCD1YHR040W PEX19Q07418 342 aa3.87□□□□□ -1.79
BCD1YHR040W SLX4Q12098 748 aa3.87□□□□□ -1.79
BCD1YHR040W TAH18Q12181 623 aa3.87□□□□□ -1.79
BCD1YHR040W TMA17Q12513 150 aa3.87□□□□□ -1.79
BCD1YHR040W SBP1P10080 294 aaKnown RBP3.86□□□□□ -1.79
BCD1YHR040W TRX2P22803 104 aaKnown RBP3.86□□□□□ -1.79
BCD1YHR040W CDC11P32458 415 aa3.86□□□□□ -1.79
BCD1YHR040W GPT2P36148 743 aa3.86□□□□□ -1.79
BCD1YHR040W RKM3P38222 552 aa3.86□□□□□ -1.79
BCD1YHR040W ERP2P39704 215 aa3.86□□□□□ -1.79
BCD1YHR040W SLS1P42900 643 aa3.86□□□□□ -1.79
BCD1YHR040W CIR1P42940 261 aa3.86□□□□□ -1.79
BCD1YHR040W RPN11P43588 306 aaKnown RBP3.86□□□□□ -1.79
BCD1YHR040W ALG2P43636 503 aa3.86□□□□□ -1.79
BCD1YHR040W IRC8P47046 822 aa3.86□□□□□ -1.79
BCD1YHR040W ENT3P47160 408 aa3.86□□□□□ -1.79
BCD1YHR040W YGR237CP50089 785 aa3.86□□□□□ -1.79
BCD1YHR040W YGL140CP53120 1219 aa3.86□□□□□ -1.79
BCD1YHR040W RSC1P53236 928 aa3.86□□□□□ -1.79
BCD1YHR040W TFB2Q02939 513 aa3.86□□□□□ -1.79
BCD1YHR040W FCP1Q03254 732 aa3.86□□□□□ -1.79
BCD1YHR040W SYF1Q04048 859 aaPredicted RBP3.86□□□□□ -1.79
BCD1YHR040W GIC2Q06648 383 aa3.86□□□□□ -1.79
BCD1YHR040W MRL1Q06815 381 aa3.86□□□□□ -1.79
BCD1YHR040W LAP2Q10740 671 aa3.86□□□□□ -1.79
BCD1YHR040W YPL150WQ12152 901 aa3.86□□□□□ -1.79
BCD1YHR040W TRP2P00899 507 aaKnown RBP3.85□□□□□ -1.79
BCD1YHR040W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
BCD1YHR040W CHS2P14180 963 aa3.85□□□□□ -1.79
BCD1YHR040W SEC23P15303 768 aaKnown RBP3.85□□□□□ -1.79
BCD1YHR040W CBP3P21560 335 aa3.85□□□□□ -1.79
BCD1YHR040W ARE1P25628 610 aa3.85□□□□□ -1.79
BCD1YHR040W SPC110P32380 944 aa3.85□□□□□ -1.79
BCD1YHR040W LYP1P32487 611 aa3.85□□□□□ -1.79
BCD1YHR040W YKT6P36015 200 aaKnown RBP3.85□□□□□ -1.79
BCD1YHR040W VBA5P36172 582 aa3.85□□□□□ -1.79
BCD1YHR040W MRPL10P36520 322 aa3.85□□□□□ -1.79
BCD1YHR040W SAF1P38352 637 aa3.85□□□□□ -1.79
BCD1YHR040W HSE1P38753 452 aa3.85□□□□□ -1.79
BCD1YHR040W NEM1P38757 446 aa3.85□□□□□ -1.79
BCD1YHR040W PES4P39684 611 aa3.85□□□□□ -1.79
BCD1YHR040W GEM1P39722 662 aa3.85□□□□□ -1.79
BCD1YHR040W NOC2P39744 710 aaKnown RBP3.85□□□□□ -1.79
BCD1YHR040W SPO74P45819 413 aa3.85□□□□□ -1.79
BCD1YHR040W HLJ1P48353 224 aa3.85□□□□□ -1.79
BCD1YHR040W CTF18P49956 741 aa3.85□□□□□ -1.79
BCD1YHR040W RTA1P53047 317 aa3.85□□□□□ -1.79
BCD1YHR040W YNR063WP53749 607 aa3.85□□□□□ -1.79
BCD1YHR040W ELA1P53861 379 aaPredicted RBP3.85□□□□□ -1.79
BCD1YHR040W YNL193WP53870 558 aa3.85□□□□□ -1.79
BCD1YHR040W SVL3Q03088 825 aaKnown RBP3.85□□□□□ -1.79
BCD1YHR040W ATG16Q03818 150 aa3.85□□□□□ -1.79
BCD1YHR040W UTP5Q04177 643 aaKnown RBP3.85□□□□□ -1.79
BCD1YHR040W EST2Q06163 884 aa3.85□□□□□ -1.79
BCD1YHR040W EAF1Q06337 982 aa3.85□□□□□ -1.79
BCD1YHR040W IRC3Q06683 689 aa3.85□□□□□ -1.79
BCD1YHR040W DDP1Q99321 188 aaKnown RBP3.85□□□□□ -1.79
BCD1YHR040W CPA2P03965 1118 aaKnown RBP3.84□□□□□ -1.79
BCD1YHR040W PFK2P16862 959 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
BCD1YHR040W PRP9P19736 530 aaKnown RBP3.84□□□□□ -1.79
BCD1YHR040W RPA135P22138 1203 aaKnown RBP3.84□□□□□ -1.79
BCD1YHR040W IMP2'P32351 346 aa3.84□□□□□ -1.79
BCD1YHR040W MFT1P33441 392 aaKnown RBP3.84□□□□□ -1.79
BCD1YHR040W PEX6P33760 1030 aa3.84□□□□□ -1.79
BCD1YHR040W MPE1P35728 441 aaKnown RBP3.84□□□□□ -1.79
BCD1YHR040W ADD66P36040 267 aa3.84□□□□□ -1.79
BCD1YHR040W KAE1P36132 386 aa3.84□□□□□ -1.79
BCD1YHR040W KTR3P38130 404 aaPredicted RBP3.84□□□□□ -1.79
BCD1YHR040W RFT1P38206 574 aaPredicted RBP3.84□□□□□ -1.79
BCD1YHR040W YAR028WP39548 234 aa3.84□□□□□ -1.79
BCD1YHR040W TCB2P48231 1178 aa3.84□□□□□ -1.79
BCD1YHR040W YGR021WP53212 290 aa3.84□□□□□ -1.79
BCD1YHR040W YGR045CP53229 120 aa3.84□□□□□ -1.79
BCD1YHR040W COG4Q06096 861 aa3.84□□□□□ -1.79
BCD1YHR040W RPN7Q06103 429 aaKnown RBP3.84□□□□□ -1.79
BCD1YHR040W YDL124WQ07551 312 aaKnown RBP3.84□□□□□ -1.79
BCD1YHR040W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
BCD1YHR040W RPS9BP05755 195 aaKnown RBP3.83□□□□□ -1.8
BCD1YHR040W DED1P06634 604 aaKnown RBP3.83□□□□□ -1.8
BCD1YHR040W ABD1P32783 436 aaPredicted RBP3.83□□□□□ -1.8
BCD1YHR040W BMH2P34730 273 aaKnown RBP3.83□□□□□ -1.8
BCD1YHR040W NNK1P36003 928 aa3.83□□□□□ -1.8
BCD1YHR040W BET3P36149 193 aa3.83□□□□□ -1.8
BCD1YHR040W TRZ1P36159 838 aaPredicted RBP3.83□□□□□ -1.8
BCD1YHR040W MAL31P38156 614 aa3.83□□□□□ -1.8
BCD1YHR040W MAL33P38157 468 aa3.83□□□□□ -1.8
BCD1YHR040W SEA4P38164 1038 aa3.83□□□□□ -1.8
BCD1YHR040W RFC5P38251 354 aa3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms